RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 PRG4Q92954 1404 aaPredicted RBP32.79■■■□□ 2.84
TCF3-219ENST00000610756 KIAA0586Q9BVV6 1533 aa32.78■■■□□ 2.84
TCF3-219ENST00000610756 RUSC2Q8N2Y8 1516 aa32.76■■■□□ 2.83
TCF3-219ENST00000610756 RAPGEF2Q9Y4G8 1499 aa32.63■■■□□ 2.81
TCF3-219ENST00000610756 TRHP20396 242 aaPredicted RBP32.63■■■□□ 2.81
TCF3-219ENST00000610756 PRXQ9BXM0 1461 aa32.46■■■□□ 2.79
TCF3-219ENST00000610756 IQGAP2Q13576 1575 aa32.45■■■□□ 2.79
TCF3-219ENST00000610756 CSRNP3Q8WYN3 585 aa32.45■■■□□ 2.78
TCF3-219ENST00000610756 CARMIL2Q6F5E8 1435 aa32.44■■■□□ 2.78
TCF3-219ENST00000610756 PTPRGP23470 1445 aa32.39■■■□□ 2.78
TCF3-219ENST00000610756 TNIKQ9UKE5 1360 aa32.36■■■□□ 2.77
TCF3-219ENST00000610756 CHIC1Q5VXU3 224 aa32.36■■■□□ 2.77
TCF3-219ENST00000610756 NPM1P06748 294 aaKnown RBP eCLIP32.35■■■□□ 2.77
TCF3-219ENST00000610756 EEA1Q15075 1411 aa32.35■■■□□ 2.77
TCF3-219ENST00000610756 UGGT2Q9NYU1 1516 aa32.32■■■□□ 2.76
TCF3-219ENST00000610756 DISP1Q96F81 1524 aa32.31■■■□□ 2.76
TCF3-219ENST00000610756 TTBK1Q5TCY1 1321 aaPredicted RBP32.27■■■□□ 2.76
TCF3-219ENST00000610756 ADCY10Q96PN6 1610 aa32.22■■■□□ 2.75
TCF3-219ENST00000610756 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.74
TCF3-219ENST00000610756 CTTNBP2Q8WZ74 1663 aa32.16■■■□□ 2.74
TCF3-219ENST00000610756 GOLGA3Q08378 1498 aa32.13■■■□□ 2.73
TCF3-219ENST00000610756 UACAQ9BZF9 1416 aa32.13■■■□□ 2.73
TCF3-219ENST00000610756 KIAA0556O60303 1618 aa32.13■■■□□ 2.73
TCF3-219ENST00000610756 MAPKBP1O60336 1514 aa32.12■■■□□ 2.73
TCF3-219ENST00000610756 UHRF1BP1LA0JNW5 1464 aa32.12■■■□□ 2.73
TCF3-219ENST00000610756 ABCC2Q92887 1545 aa32.08■■■□□ 2.73
TCF3-219ENST00000610756 FAM69CQ0P6D2 419 aa32.07■■■□□ 2.72
TCF3-219ENST00000610756 ABCC10Q5T3U5 1492 aa32.07■■■□□ 2.72
TCF3-219ENST00000610756 KDM5BQ9UGL1 1544 aa31.96■■■□□ 2.71
TCF3-219ENST00000610756 P3H3Q8IVL6 736 aa31.95■■■□□ 2.7
TCF3-219ENST00000610756 KIF13AQ9H1H9 1805 aa31.95■■■□□ 2.7
TCF3-219ENST00000610756 KIF21BO75037 1637 aa31.93■■■□□ 2.7
TCF3-219ENST00000610756 ASXL2Q76L83 1435 aa31.92■■■□□ 2.7
TCF3-219ENST00000610756 PLB1Q6P1J6 1458 aa31.92■■■□□ 2.7
TCF3-219ENST00000610756 DIP2BQ9P265 1576 aa31.9■■■□□ 2.7
TCF3-219ENST00000610756 ABCA8O94911 1581 aa31.84■■■□□ 2.69
TCF3-219ENST00000610756 SAMD9Q5K651 1589 aa31.83■■■□□ 2.69
TCF3-219ENST00000610756 UBTFP17480 764 aaKnown RBP31.82■■■□□ 2.68
TCF3-219ENST00000610756 RANGAP1P46060 587 aaPredicted RBP31.82■■■□□ 2.68
TCF3-219ENST00000610756 EHMT2Q96KQ7 1210 aa31.77■■■□□ 2.68
TCF3-219ENST00000610756 ZCCHC11Q5TAX3 1644 aaKnown RBP31.77■■■□□ 2.68
TCF3-219ENST00000610756 GLI2P10070 1586 aa31.74■■■□□ 2.67
TCF3-219ENST00000610756 EPRSP07814 1512 aaKnown RBP31.71■■■□□ 2.67
TCF3-219ENST00000610756 WDR7Q9Y4E6 1490 aa31.68■■■□□ 2.66
TCF3-219ENST00000610756 FHOD3Q2V2M9 1422 aa31.68■■■□□ 2.66
TCF3-219ENST00000610756 ATP10BO94823 1461 aa31.66■■■□□ 2.66
TCF3-219ENST00000610756 EFCAB5A4FU69 1503 aa31.65■■■□□ 2.66
TCF3-219ENST00000610756 ARID3CA6NKF2 412 aa31.62■■■□□ 2.65
TCF3-219ENST00000610756 KCNH8Q96L42 1107 aa31.62■■■□□ 2.65
TCF3-219ENST00000610756 TSPOAP1O95153 1857 aa31.57■■■□□ 2.64
TCF3-219ENST00000610756 RAPGEF6Q8TEU7 1601 aa31.57■■■□□ 2.64
TCF3-219ENST00000610756 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
TCF3-219ENST00000610756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.52■■■□□ 2.64
TCF3-219ENST00000610756 HNRNPUL2Q1KMD3 747 aaKnown RBP31.52■■■□□ 2.64
TCF3-219ENST00000610756 MAP3K4Q9Y6R4 1608 aa31.51■■■□□ 2.64
TCF3-219ENST00000610756 ARHGAP35Q9NRY4 1499 aa31.49■■■□□ 2.63
TCF3-219ENST00000610756 CD109Q6YHK3 1445 aa31.48■■■□□ 2.63
TCF3-219ENST00000610756 PPRC1Q5VV67 1664 aaKnown RBP31.47■■■□□ 2.63
TCF3-219ENST00000610756 KDM6BO15054 1643 aa31.47■■■□□ 2.63
TCF3-219ENST00000610756 TEX14Q8IWB6 1497 aa31.47■■■□□ 2.63
TCF3-219ENST00000610756 FMN1Q68DA7 1419 aa31.44■■■□□ 2.62
TCF3-219ENST00000610756 PLEKHD1A6NEE1 506 aa31.43■■■□□ 2.62
TCF3-219ENST00000610756 MAGI3Q5TCQ9 1506 aa31.41■■■□□ 2.62
TCF3-219ENST00000610756 CFAP43Q8NDM7 1665 aa31.37■■■□□ 2.61
TCF3-219ENST00000610756 COL17A1Q9UMD9 1497 aaPredicted RBP31.36■■■□□ 2.61
TCF3-219ENST00000610756 ATP1B4Q9UN42 357 aaPredicted RBP31.33■■■□□ 2.61
TCF3-219ENST00000610756 ABCA9Q8IUA7 1624 aa31.27■■■□□ 2.6
TCF3-219ENST00000610756 CDK11AQ9UQ88 783 aaPredicted RBP31.24■■■□□ 2.59
TCF3-219ENST00000610756 PHLDB1Q86UU1 1377 aa31.23■■■□□ 2.59
TCF3-219ENST00000610756 CDK13Q14004 1512 aaKnown RBP31.22■■■□□ 2.59
TCF3-219ENST00000610756 CLIP1P30622 1438 aa31.22■■■□□ 2.59
TCF3-219ENST00000610756 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
TCF3-219ENST00000610756 HECW1Q76N89 1606 aa31.2■■■□□ 2.59
TCF3-219ENST00000610756 CASKIN1Q8WXD9 1431 aa31.16■■■□□ 2.58
TCF3-219ENST00000610756 ARAP3Q8WWN8 1544 aa31.15■■■□□ 2.58
TCF3-219ENST00000610756 NEO1Q92859 1461 aa31.13■■■□□ 2.57
TCF3-219ENST00000610756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.11■■■□□ 2.571e-7■■■□□ 15.5
TCF3-219ENST00000610756 KDM4FA0A1W2PPD8 638 aa31.05■■■□□ 2.56
TCF3-219ENST00000610756 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
TCF3-219ENST00000610756 TROQ12816 1431 aaPredicted RBP31.04■■■□□ 2.56
TCF3-219ENST00000610756 RAPGEF3O95398 923 aa31.03■■■□□ 2.56
TCF3-219ENST00000610756 CCDC18Q5T9S5 1454 aa31.03■■■□□ 2.56
TCF3-219ENST00000610756 PLCH2O75038 1416 aa31.01■■■□□ 2.56
TCF3-219ENST00000610756 FYCO1Q9BQS8 1478 aa31.01■■■□□ 2.55
TCF3-219ENST00000610756 PCF11O94913 1555 aaKnown RBP31■■■□□ 2.55
TCF3-219ENST00000610756 FANCAO15360 1455 aa31■■■□□ 2.55
TCF3-219ENST00000610756 TTC37Q6PGP7 1564 aa31■■■□□ 2.55
TCF3-219ENST00000610756 AKNAQ7Z591 1439 aa31■■■□□ 2.55
TCF3-219ENST00000610756 CEP162Q5TB80 1403 aa30.99■■■□□ 2.55
TCF3-219ENST00000610756 LRRIQ1Q96JM4 1722 aa30.96■■■□□ 2.55
TCF3-219ENST00000610756 EFCAB2Q5VUJ9 269 aa30.94■■■□□ 2.54
TCF3-219ENST00000610756 DENND4BO75064 1496 aaPredicted RBP30.91■■■□□ 2.54
TCF3-219ENST00000610756 KIF14Q15058 1648 aa30.89■■■□□ 2.54
TCF3-219ENST00000610756 CFAP74Q9C0B2 1584 aa30.89■■■□□ 2.53
TCF3-219ENST00000610756 ADGRL1O94910 1474 aa30.83■■■□□ 2.53
TCF3-219ENST00000610756 SCAPERQ9BY12 1400 aa30.82■■■□□ 2.52
TCF3-219ENST00000610756 FRMPD1Q5SYB0 1578 aa30.81■■■□□ 2.52
TCF3-219ENST00000610756 MYO5CQ9NQX4 1742 aa30.78■■■□□ 2.52
TCF3-219ENST00000610756 ARHGAP5Q13017 1502 aa30.75■■■□□ 2.51
TCF3-219ENST00000610756 RICTORQ6R327 1708 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms