RNA–Protein interactions for RNA: ENST00000610642.4

SLC6A6-203, Transcript of solute carrier family 6 member 6, humanhuman

TSL 2

Gene SLC6A6, Length 1,983 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-203ENST00000610642 RANGAP1P46060 587 aaPredicted RBP30.12■■■□□ 2.41
SLC6A6-203ENST00000610642 FBLN2P98095 1184 aa30.1■■■□□ 2.41
SLC6A6-203ENST00000610642 IQGAP2Q13576 1575 aa29.99■■■□□ 2.39
SLC6A6-203ENST00000610642 CEP170Q5SW79 1584 aa29.99■■■□□ 2.39
SLC6A6-203ENST00000610642 NUP160Q12769 1436 aa29.98■■■□□ 2.39
SLC6A6-203ENST00000610642 ARHGAP35Q9NRY4 1499 aa29.98■■■□□ 2.39
SLC6A6-203ENST00000610642 KIAA0586Q9BVV6 1533 aa29.98■■■□□ 2.39
SLC6A6-203ENST00000610642 CHD1O14646 1710 aa29.98■■■□□ 2.39
SLC6A6-203ENST00000610642 EFCAB5A4FU69 1503 aa29.93■■■□□ 2.38
SLC6A6-203ENST00000610642 ARAP1Q96P48 1450 aa29.92■■■□□ 2.38
SLC6A6-203ENST00000610642 VPS8Q8N3P4 1428 aa29.86■■■□□ 2.37
SLC6A6-203ENST00000610642 SAMD9Q5K651 1589 aa29.85■■■□□ 2.37
SLC6A6-203ENST00000610642 UGGT2Q9NYU1 1516 aa29.85■■■□□ 2.37
SLC6A6-203ENST00000610642 P3H3Q8IVL6 736 aa29.79■■■□□ 2.36
SLC6A6-203ENST00000610642 FHOD3Q2V2M9 1422 aa29.77■■■□□ 2.36
SLC6A6-203ENST00000610642 JPH4Q96JJ6 628 aa29.73■■■□□ 2.35
SLC6A6-203ENST00000610642 DISP1Q96F81 1524 aa29.7■■■□□ 2.35
SLC6A6-203ENST00000610642 KIAA0556O60303 1618 aa29.69■■■□□ 2.34
SLC6A6-203ENST00000610642 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
SLC6A6-203ENST00000610642 FMN1Q68DA7 1419 aa29.65■■■□□ 2.34
SLC6A6-203ENST00000610642 CARMIL2Q6F5E8 1435 aa29.63■■■□□ 2.33
SLC6A6-203ENST00000610642 SHROOM2Q13796 1616 aa29.62■■■□□ 2.33
SLC6A6-203ENST00000610642 PRG4Q92954 1404 aaPredicted RBP29.57■■■□□ 2.32
SLC6A6-203ENST00000610642 APLP2Q06481 763 aa29.56■■■□□ 2.32
SLC6A6-203ENST00000610642 PCF11O94913 1555 aaKnown RBP29.56■■■□□ 2.32
SLC6A6-203ENST00000610642 CASKIN1Q8WXD9 1431 aa29.55■■■□□ 2.32
SLC6A6-203ENST00000610642 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
SLC6A6-203ENST00000610642 FYCO1Q9BQS8 1478 aa29.53■■■□□ 2.32
SLC6A6-203ENST00000610642 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
SLC6A6-203ENST00000610642 ATP1B4Q9UN42 357 aaPredicted RBP29.44■■■□□ 2.3
SLC6A6-203ENST00000610642 TTBK1Q5TCY1 1321 aaPredicted RBP29.43■■■□□ 2.3
SLC6A6-203ENST00000610642 MAP3K1Q13233 1512 aa29.43■■■□□ 2.3
SLC6A6-203ENST00000610642 ERCC6L2Q5T890 1561 aa29.4■■■□□ 2.3
SLC6A6-203ENST00000610642 TIAM1Q13009 1591 aa29.39■■■□□ 2.29
SLC6A6-203ENST00000610642 HECW1Q76N89 1606 aa29.38■■■□□ 2.29
SLC6A6-203ENST00000610642 PTPRGP23470 1445 aa29.35■■■□□ 2.29
SLC6A6-203ENST00000610642 RAPGEF6Q8TEU7 1601 aa29.35■■■□□ 2.29
SLC6A6-203ENST00000610642 CFAP43Q8NDM7 1665 aa29.35■■■□□ 2.29
SLC6A6-203ENST00000610642 PLB1Q6P1J6 1458 aa29.31■■■□□ 2.28
SLC6A6-203ENST00000610642 LRRIQ1Q96JM4 1722 aa29.31■■■□□ 2.28
SLC6A6-203ENST00000610642 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
SLC6A6-203ENST00000610642 CCDC18Q5T9S5 1454 aa29.3■■■□□ 2.28
SLC6A6-203ENST00000610642 ABCA8O94911 1581 aa29.28■■■□□ 2.28
SLC6A6-203ENST00000610642 EPRSP07814 1512 aaKnown RBP29.27■■■□□ 2.28
SLC6A6-203ENST00000610642 NUP153P49790 1475 aaKnown RBP29.26■■■□□ 2.28
SLC6A6-203ENST00000610642 LRRC9Q6ZRR7 1453 aa29.25■■■□□ 2.27
SLC6A6-203ENST00000610642 TRIM26Q12899 539 aaPredicted RBP29.25■■■□□ 2.27
SLC6A6-203ENST00000610642 CDK13Q14004 1512 aaKnown RBP29.19■■■□□ 2.26
SLC6A6-203ENST00000610642 UACAQ9BZF9 1416 aa29.19■■■□□ 2.26
SLC6A6-203ENST00000610642 ARID3CA6NKF2 412 aa29.16■■■□□ 2.26
SLC6A6-203ENST00000610642 MTUS2Q5JR59 1369 aa29.14■■■□□ 2.26
SLC6A6-203ENST00000610642 ABCC2Q92887 1545 aa29.11■■■□□ 2.25
SLC6A6-203ENST00000610642 EHBP1L1Q8N3D4 1523 aa29.1■■■□□ 2.25
SLC6A6-203ENST00000610642 PCGF6Q9BYE7 350 aa29.1■■■□□ 2.25
SLC6A6-203ENST00000610642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
SLC6A6-203ENST00000610642 HNRNPUL2Q1KMD3 747 aaKnown RBP29.09■■■□□ 2.25
SLC6A6-203ENST00000610642 MAGI3Q5TCQ9 1506 aa29.08■■■□□ 2.25
SLC6A6-203ENST00000610642 ATP10BO94823 1461 aa29.07■■■□□ 2.24
SLC6A6-203ENST00000610642 UHRF1BP1LA0JNW5 1464 aa29.07■■■□□ 2.24
SLC6A6-203ENST00000610642 CDK11AQ9UQ88 783 aaPredicted RBP29.06■■■□□ 2.24
SLC6A6-203ENST00000610642 ARHGEF11O15085 1522 aa29.05■■■□□ 2.24
SLC6A6-203ENST00000610642 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
SLC6A6-203ENST00000610642 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
SLC6A6-203ENST00000610642 TROQ12816 1431 aaPredicted RBP28.96■■■□□ 2.23
SLC6A6-203ENST00000610642 PHLDB1Q86UU1 1377 aa28.96■■■□□ 2.23
SLC6A6-203ENST00000610642 ADCY10Q96PN6 1610 aa28.95■■■□□ 2.23
SLC6A6-203ENST00000610642 KDM5BQ9UGL1 1544 aa28.94■■■□□ 2.22
SLC6A6-203ENST00000610642 PLEKHD1A6NEE1 506 aa28.93■■■□□ 2.22
SLC6A6-203ENST00000610642 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
SLC6A6-203ENST00000610642 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
SLC6A6-203ENST00000610642 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
SLC6A6-203ENST00000610642 RRBP1Q9P2E9 1410 aaKnown RBP28.91■■■□□ 2.22
SLC6A6-203ENST00000610642 ZCCHC11Q5TAX3 1644 aaKnown RBP28.9■■■□□ 2.22
SLC6A6-203ENST00000610642 CCNB3Q8WWL7 1395 aa28.84■■■□□ 2.21
SLC6A6-203ENST00000610642 MYOM3Q5VTT5 1437 aa28.83■■■□□ 2.21
SLC6A6-203ENST00000610642 KIF14Q15058 1648 aa28.81■■■□□ 2.2
SLC6A6-203ENST00000610642 FGD6Q6ZV73 1430 aa28.78■■■□□ 2.2
SLC6A6-203ENST00000610642 CYB5RLQ6IPT4 315 aa28.77■■■□□ 2.2
SLC6A6-203ENST00000610642 NPM1P06748 294 aaKnown RBP eCLIP28.75■■■□□ 2.19
SLC6A6-203ENST00000610642 ABCC10Q5T3U5 1492 aa28.72■■■□□ 2.19
SLC6A6-203ENST00000610642 MIA2Q96PC5 1412 aa28.71■■■□□ 2.19
SLC6A6-203ENST00000610642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.7■■■□□ 2.19
SLC6A6-203ENST00000610642 FAM50AQ14320 339 aaKnown RBP28.69■■■□□ 2.18
SLC6A6-203ENST00000610642 WDR7Q9Y4E6 1490 aa28.68■■■□□ 2.18
SLC6A6-203ENST00000610642 ITSN2Q9NZM3 1697 aa28.68■■■□□ 2.18
SLC6A6-203ENST00000610642 GPATCH8Q9UKJ3 1502 aaKnown RBP28.67■■■□□ 2.18
SLC6A6-203ENST00000610642 PTPN23Q9H3S7 1636 aa28.66■■■□□ 2.18
SLC6A6-203ENST00000610642 ASXL2Q76L83 1435 aa28.65■■■□□ 2.18
SLC6A6-203ENST00000610642 KCNH8Q96L42 1107 aa28.64■■■□□ 2.18
SLC6A6-203ENST00000610642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.63■■■□□ 2.177e-8■■■□□ 15.3
SLC6A6-203ENST00000610642 TCOF1Q13428 1488 aaKnown RBP28.63■■■□□ 2.17
SLC6A6-203ENST00000610642 CDC42BPAQ5VT25 1732 aa28.62■■■□□ 2.17
SLC6A6-203ENST00000610642 CFDP1Q9UEE9 299 aaPredicted RBP28.6■■■□□ 2.17
SLC6A6-203ENST00000610642 TTC37Q6PGP7 1564 aa28.6■■■□□ 2.17
SLC6A6-203ENST00000610642 ITGAEP38570 1179 aa28.56■■■□□ 2.16
SLC6A6-203ENST00000610642 PREX2Q70Z35 1606 aa28.55■■■□□ 2.16
SLC6A6-203ENST00000610642 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
SLC6A6-203ENST00000610642 MYO5CQ9NQX4 1742 aa28.52■■■□□ 2.16
SLC6A6-203ENST00000610642 CDC42BPBQ9Y5S2 1711 aa28.51■■■□□ 2.15
SLC6A6-203ENST00000610642 CAMSAP2Q08AD1 1489 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms