RNA–Protein interactions for RNA: ENST00000610292.4

TP53-218, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-218ENST00000610292 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
TP53-218ENST00000610292 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
TP53-218ENST00000610292 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
TP53-218ENST00000610292 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
TP53-218ENST00000610292 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
TP53-218ENST00000610292 FAM50AQ14320 339 aaKnown RBP17.09■□□□□ 0.33
TP53-218ENST00000610292 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
TP53-218ENST00000610292 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.33
TP53-218ENST00000610292 KCNH8Q96L42 1107 aa17.08■□□□□ 0.33
TP53-218ENST00000610292 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.33
TP53-218ENST00000610292 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
TP53-218ENST00000610292 SETD5Q9C0A6 1442 aa17.08■□□□□ 0.32
TP53-218ENST00000610292 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
TP53-218ENST00000610292 MYT1Q01538 1121 aa17.06■□□□□ 0.32
TP53-218ENST00000610292 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
TP53-218ENST00000610292 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
TP53-218ENST00000610292 PRDM2Q13029 1718 aa17.02■□□□□ 0.31
TP53-218ENST00000610292 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
TP53-218ENST00000610292 ZBTB22O15209 634 aa16.99■□□□□ 0.31
TP53-218ENST00000610292 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
TP53-218ENST00000610292 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
TP53-218ENST00000610292 PCF11O94913 1555 aaKnown RBP16.96■□□□□ 0.31
TP53-218ENST00000610292 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
TP53-218ENST00000610292 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.3
TP53-218ENST00000610292 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
TP53-218ENST00000610292 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
TP53-218ENST00000610292 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
TP53-218ENST00000610292 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
TP53-218ENST00000610292 CFAP43Q8NDM7 1665 aa16.91■□□□□ 0.3
TP53-218ENST00000610292 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
TP53-218ENST00000610292 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
TP53-218ENST00000610292 TSHZ2Q9NRE2 1034 aa16.87■□□□□ 0.29
TP53-218ENST00000610292 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
TP53-218ENST00000610292 FYCO1Q9BQS8 1478 aa16.87■□□□□ 0.29
TP53-218ENST00000610292 BCANQ96GW7 911 aa16.85■□□□□ 0.29
TP53-218ENST00000610292 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
TP53-218ENST00000610292 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
TP53-218ENST00000610292 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
TP53-218ENST00000610292 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
TP53-218ENST00000610292 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
TP53-218ENST00000610292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
TP53-218ENST00000610292 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
TP53-218ENST00000610292 FKBP8Q14318 412 aa16.81■□□□□ 0.28
TP53-218ENST00000610292 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
TP53-218ENST00000610292 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.288e-7■■■□□ 16.1
TP53-218ENST00000610292 FGD6Q6ZV73 1430 aa16.81■□□□□ 0.28
TP53-218ENST00000610292 NESP48681 1621 aa16.79■□□□□ 0.28
TP53-218ENST00000610292 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
TP53-218ENST00000610292 ANP32CO43423 234 aa16.78■□□□□ 0.28
TP53-218ENST00000610292 TONSLQ96HA7 1378 aa16.78■□□□□ 0.28
TP53-218ENST00000610292 FMN1Q68DA7 1419 aa16.78■□□□□ 0.28
TP53-218ENST00000610292 TRIM52Q96A61 297 aa16.77■□□□□ 0.28
TP53-218ENST00000610292 PTPRKQ15262 1439 aa16.77■□□□□ 0.28
TP53-218ENST00000610292 CCDC18Q5T9S5 1454 aa16.76■□□□□ 0.27
TP53-218ENST00000610292 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
TP53-218ENST00000610292 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
TP53-218ENST00000610292 CUL7Q14999 1698 aa16.74■□□□□ 0.27
TP53-218ENST00000610292 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
TP53-218ENST00000610292 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
TP53-218ENST00000610292 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
TP53-218ENST00000610292 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
TP53-218ENST00000610292 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
TP53-218ENST00000610292 NEFLP07196 543 aa16.68■□□□□ 0.26
TP53-218ENST00000610292 NAIPQ13075 1403 aa16.68■□□□□ 0.26
TP53-218ENST00000610292 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
TP53-218ENST00000610292 MYOM3Q5VTT5 1437 aa16.67■□□□□ 0.26
TP53-218ENST00000610292 URB2Q14146 1524 aaKnown RBP16.67■□□□□ 0.26
TP53-218ENST00000610292 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
TP53-218ENST00000610292 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
TP53-218ENST00000610292 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
TP53-218ENST00000610292 LRRIQ1Q96JM4 1722 aa16.63■□□□□ 0.25
TP53-218ENST00000610292 SAMD9Q5K651 1589 aa16.63■□□□□ 0.25
TP53-218ENST00000610292 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
TP53-218ENST00000610292 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
TP53-218ENST00000610292 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
TP53-218ENST00000610292 KDM5BQ9UGL1 1544 aa16.58■□□□□ 0.25
TP53-218ENST00000610292 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
TP53-218ENST00000610292 EHBP1L1Q8N3D4 1523 aa16.58■□□□□ 0.24
TP53-218ENST00000610292 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
TP53-218ENST00000610292 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
TP53-218ENST00000610292 UGGT2Q9NYU1 1516 aa16.56■□□□□ 0.24
TP53-218ENST00000610292 HNRNPUQ00839 825 aaKnown RBP eCLIP16.56■□□□□ 0.24
TP53-218ENST00000610292 RTN4Q9NQC3 1192 aaKnown RBP16.55■□□□□ 0.24
TP53-218ENST00000610292 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
TP53-218ENST00000610292 ARID3CA6NKF2 412 aa16.55■□□□□ 0.24
TP53-218ENST00000610292 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
TP53-218ENST00000610292 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
TP53-218ENST00000610292 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
TP53-218ENST00000610292 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
TP53-218ENST00000610292 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
TP53-218ENST00000610292 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
TP53-218ENST00000610292 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
TP53-218ENST00000610292 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
TP53-218ENST00000610292 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
TP53-218ENST00000610292 EIF4G2P78344 907 aaKnown RBP eCLIP16.49■□□□□ 0.23
TP53-218ENST00000610292 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
TP53-218ENST00000610292 TCOF1Q13428 1488 aaKnown RBP16.49■□□□□ 0.23
TP53-218ENST00000610292 KDM6BO15054 1643 aa16.49■□□□□ 0.23
TP53-218ENST00000610292 L3MBTL2Q969R5 705 aa16.49■□□□□ 0.23
TP53-218ENST00000610292 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms