RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
USP6NL-206ENST00000609853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
USP6NL-206ENST00000609853 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
USP6NL-206ENST00000609853 TIAM1Q13009 1591 aa18.02■□□□□ 0.48
USP6NL-206ENST00000609853 RRBP1Q9P2E9 1410 aaKnown RBP18.01■□□□□ 0.47
USP6NL-206ENST00000609853 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
USP6NL-206ENST00000609853 AQRO60306 1485 aaKnown RBP eCLIP18■□□□□ 0.47
USP6NL-206ENST00000609853 WDR62O43379 1518 aa18■□□□□ 0.47
USP6NL-206ENST00000609853 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
USP6NL-206ENST00000609853 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
USP6NL-206ENST00000609853 FYCO1Q9BQS8 1478 aa17.97■□□□□ 0.47
USP6NL-206ENST00000609853 CFAP43Q8NDM7 1665 aa17.97■□□□□ 0.47
USP6NL-206ENST00000609853 FMN1Q68DA7 1419 aa17.96■□□□□ 0.46
USP6NL-206ENST00000609853 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
USP6NL-206ENST00000609853 SAMD9Q5K651 1589 aa17.94■□□□□ 0.46
USP6NL-206ENST00000609853 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
USP6NL-206ENST00000609853 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
USP6NL-206ENST00000609853 PCF11O94913 1555 aaKnown RBP17.93■□□□□ 0.46
USP6NL-206ENST00000609853 GRIN2BQ13224 1484 aa17.93■□□□□ 0.46
USP6NL-206ENST00000609853 FHOD3Q2V2M9 1422 aa17.91■□□□□ 0.46
USP6NL-206ENST00000609853 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
USP6NL-206ENST00000609853 CCNB3Q8WWL7 1395 aa17.9■□□□□ 0.46
USP6NL-206ENST00000609853 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
USP6NL-206ENST00000609853 CLSPNQ9HAW4 1339 aa17.85■□□□□ 0.45
USP6NL-206ENST00000609853 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
USP6NL-206ENST00000609853 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
USP6NL-206ENST00000609853 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.45
USP6NL-206ENST00000609853 IQGAP2Q13576 1575 aa17.82■□□□□ 0.44
USP6NL-206ENST00000609853 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
USP6NL-206ENST00000609853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.44
USP6NL-206ENST00000609853 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
USP6NL-206ENST00000609853 UGGT2Q9NYU1 1516 aa17.75■□□□□ 0.43
USP6NL-206ENST00000609853 PHLDB1Q86UU1 1377 aa17.75■□□□□ 0.43
USP6NL-206ENST00000609853 ATP1B4Q9UN42 357 aaPredicted RBP17.75■□□□□ 0.43
USP6NL-206ENST00000609853 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
USP6NL-206ENST00000609853 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
USP6NL-206ENST00000609853 KIAA0586Q9BVV6 1533 aa17.72■□□□□ 0.43
USP6NL-206ENST00000609853 DHX57Q6P158 1386 aaKnown RBP17.71■□□□□ 0.43
USP6NL-206ENST00000609853 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
USP6NL-206ENST00000609853 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
USP6NL-206ENST00000609853 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
USP6NL-206ENST00000609853 MTUS2Q5JR59 1369 aa17.69■□□□□ 0.42
USP6NL-206ENST00000609853 EHBP1L1Q8N3D4 1523 aa17.69■□□□□ 0.42
USP6NL-206ENST00000609853 SUPT6HQ7KZ85 1726 aaKnown RBP17.67■□□□□ 0.42
USP6NL-206ENST00000609853 SYNJ2O15056 1496 aa17.65■□□□□ 0.42
USP6NL-206ENST00000609853 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.42
USP6NL-206ENST00000609853 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
USP6NL-206ENST00000609853 KIAA0556O60303 1618 aa17.62■□□□□ 0.41
USP6NL-206ENST00000609853 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
USP6NL-206ENST00000609853 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
USP6NL-206ENST00000609853 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
USP6NL-206ENST00000609853 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
USP6NL-206ENST00000609853 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
USP6NL-206ENST00000609853 ITGAEP38570 1179 aa17.6■□□□□ 0.41
USP6NL-206ENST00000609853 EPRSP07814 1512 aaKnown RBP17.59■□□□□ 0.41
USP6NL-206ENST00000609853 DISP1Q96F81 1524 aa17.59■□□□□ 0.41
USP6NL-206ENST00000609853 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
USP6NL-206ENST00000609853 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
USP6NL-206ENST00000609853 NUP160Q12769 1436 aa17.55■□□□□ 0.4
USP6NL-206ENST00000609853 FOXD1Q16676 465 aa17.55■□□□□ 0.4
USP6NL-206ENST00000609853 CEP170Q5SW79 1584 aa17.54■□□□□ 0.4
USP6NL-206ENST00000609853 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
USP6NL-206ENST00000609853 MAGI3Q5TCQ9 1506 aa17.53■□□□□ 0.4
USP6NL-206ENST00000609853 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
USP6NL-206ENST00000609853 CARMIL2Q6F5E8 1435 aa17.51■□□□□ 0.39
USP6NL-206ENST00000609853 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
USP6NL-206ENST00000609853 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
USP6NL-206ENST00000609853 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
USP6NL-206ENST00000609853 CDK13Q14004 1512 aaKnown RBP17.48■□□□□ 0.39
USP6NL-206ENST00000609853 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
USP6NL-206ENST00000609853 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
USP6NL-206ENST00000609853 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
USP6NL-206ENST00000609853 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
USP6NL-206ENST00000609853 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
USP6NL-206ENST00000609853 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
USP6NL-206ENST00000609853 FBLN2P98095 1184 aa17.43■□□□□ 0.38
USP6NL-206ENST00000609853 AKNAQ7Z591 1439 aa17.42■□□□□ 0.38
USP6NL-206ENST00000609853 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
USP6NL-206ENST00000609853 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
USP6NL-206ENST00000609853 NAIPQ13075 1403 aa17.39■□□□□ 0.37
USP6NL-206ENST00000609853 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
USP6NL-206ENST00000609853 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
USP6NL-206ENST00000609853 GCC2Q8IWJ2 1684 aa17.37■□□□□ 0.37
USP6NL-206ENST00000609853 TROQ12816 1431 aaPredicted RBP17.37■□□□□ 0.37
USP6NL-206ENST00000609853 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
USP6NL-206ENST00000609853 ABCA8O94911 1581 aa17.34■□□□□ 0.37
USP6NL-206ENST00000609853 PLB1Q6P1J6 1458 aa17.34■□□□□ 0.37
USP6NL-206ENST00000609853 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.37
USP6NL-206ENST00000609853 CHD1O14646 1710 aa17.31■□□□□ 0.36
USP6NL-206ENST00000609853 ROCK1Q13464 1354 aa17.31■□□□□ 0.36
USP6NL-206ENST00000609853 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
USP6NL-206ENST00000609853 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
USP6NL-206ENST00000609853 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
USP6NL-206ENST00000609853 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.35
USP6NL-206ENST00000609853 DAPK1P53355 1430 aa17.26■□□□□ 0.35
USP6NL-206ENST00000609853 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
USP6NL-206ENST00000609853 GPATCH8Q9UKJ3 1502 aaKnown RBP17.23■□□□□ 0.35
USP6NL-206ENST00000609853 PTPRGP23470 1445 aa17.23■□□□□ 0.35
USP6NL-206ENST00000609853 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
USP6NL-206ENST00000609853 ATP10BO94823 1461 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms