RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
HDDC2-209ENST00000609477 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
HDDC2-209ENST00000609477 EEA1Q15075 1411 aa23.98■■□□□ 1.43
HDDC2-209ENST00000609477 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
HDDC2-209ENST00000609477 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
HDDC2-209ENST00000609477 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
HDDC2-209ENST00000609477 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
HDDC2-209ENST00000609477 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
HDDC2-209ENST00000609477 IQGAP2Q13576 1575 aa23.85■■□□□ 1.41
HDDC2-209ENST00000609477 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
HDDC2-209ENST00000609477 CTTNBP2Q8WZ74 1663 aa23.76■■□□□ 1.39
HDDC2-209ENST00000609477 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
HDDC2-209ENST00000609477 KIF21BO75037 1637 aa23.67■■□□□ 1.38
HDDC2-209ENST00000609477 FAM9AQ8IZU1 332 aaPredicted RBP23.67■■□□□ 1.38
HDDC2-209ENST00000609477 TNIKQ9UKE5 1360 aa23.66■■□□□ 1.38
HDDC2-209ENST00000609477 DISP1Q96F81 1524 aa23.66■■□□□ 1.38
HDDC2-209ENST00000609477 GOLGA3Q08378 1498 aa23.64■■□□□ 1.38
HDDC2-209ENST00000609477 PTPRGP23470 1445 aa23.64■■□□□ 1.37
HDDC2-209ENST00000609477 KIAA0556O60303 1618 aa23.6■■□□□ 1.37
HDDC2-209ENST00000609477 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
HDDC2-209ENST00000609477 ADCY10Q96PN6 1610 aa23.52■■□□□ 1.36
HDDC2-209ENST00000609477 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
HDDC2-209ENST00000609477 TRHP20396 242 aaPredicted RBP23.5■■□□□ 1.35
HDDC2-209ENST00000609477 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
HDDC2-209ENST00000609477 SAMD9Q5K651 1589 aa23.46■■□□□ 1.35
HDDC2-209ENST00000609477 MAPKBP1O60336 1514 aa23.45■■□□□ 1.34
HDDC2-209ENST00000609477 ABCC2Q92887 1545 aa23.44■■□□□ 1.34
HDDC2-209ENST00000609477 TTBK1Q5TCY1 1321 aaPredicted RBP23.44■■□□□ 1.34
HDDC2-209ENST00000609477 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
HDDC2-209ENST00000609477 EFCAB5A4FU69 1503 aa23.39■■□□□ 1.34
HDDC2-209ENST00000609477 KDM5BQ9UGL1 1544 aa23.37■■□□□ 1.33
HDDC2-209ENST00000609477 ABCA8O94911 1581 aa23.35■■□□□ 1.33
HDDC2-209ENST00000609477 PLB1Q6P1J6 1458 aa23.34■■□□□ 1.33
HDDC2-209ENST00000609477 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
HDDC2-209ENST00000609477 ABCC10Q5T3U5 1492 aa23.32■■□□□ 1.32
HDDC2-209ENST00000609477 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
HDDC2-209ENST00000609477 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
HDDC2-209ENST00000609477 KIF13AQ9H1H9 1805 aa23.28■■□□□ 1.32
HDDC2-209ENST00000609477 ZCCHC11Q5TAX3 1644 aaKnown RBP23.27■■□□□ 1.32
HDDC2-209ENST00000609477 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
HDDC2-209ENST00000609477 DIP2BQ9P265 1576 aa23.25■■□□□ 1.31
HDDC2-209ENST00000609477 FHOD3Q2V2M9 1422 aa23.25■■□□□ 1.31
HDDC2-209ENST00000609477 FAM69CQ0P6D2 419 aa23.24■■□□□ 1.31
HDDC2-209ENST00000609477 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
HDDC2-209ENST00000609477 ARHGAP35Q9NRY4 1499 aa23.21■■□□□ 1.31
HDDC2-209ENST00000609477 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
HDDC2-209ENST00000609477 GLI2P10070 1586 aa23.18■■□□□ 1.3
HDDC2-209ENST00000609477 WDR7Q9Y4E6 1490 aa23.17■■□□□ 1.3
HDDC2-209ENST00000609477 ATP10BO94823 1461 aa23.16■■□□□ 1.3
HDDC2-209ENST00000609477 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
HDDC2-209ENST00000609477 NUP153P49790 1475 aaKnown RBP23.13■■□□□ 1.29
HDDC2-209ENST00000609477 CLIP1P30622 1438 aa23.08■■□□□ 1.28
HDDC2-209ENST00000609477 MAP3K4Q9Y6R4 1608 aa23.04■■□□□ 1.28
HDDC2-209ENST00000609477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
HDDC2-209ENST00000609477 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
HDDC2-209ENST00000609477 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
HDDC2-209ENST00000609477 ARID3CA6NKF2 412 aa23.02■■□□□ 1.28
HDDC2-209ENST00000609477 PLEKHD1A6NEE1 506 aa23.01■■□□□ 1.27
HDDC2-209ENST00000609477 TSPOAP1O95153 1857 aa23■■□□□ 1.27
HDDC2-209ENST00000609477 CFAP43Q8NDM7 1665 aa23■■□□□ 1.27
HDDC2-209ENST00000609477 KCNH8Q96L42 1107 aa23■■□□□ 1.27
HDDC2-209ENST00000609477 TEX14Q8IWB6 1497 aa22.98■■□□□ 1.27
HDDC2-209ENST00000609477 CASKIN1Q8WXD9 1431 aa22.97■■□□□ 1.27
HDDC2-209ENST00000609477 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
HDDC2-209ENST00000609477 PPRC1Q5VV67 1664 aaKnown RBP22.96■■□□□ 1.27
HDDC2-209ENST00000609477 CEP162Q5TB80 1403 aa22.95■■□□□ 1.26
HDDC2-209ENST00000609477 CD109Q6YHK3 1445 aa22.95■■□□□ 1.26
HDDC2-209ENST00000609477 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
HDDC2-209ENST00000609477 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
HDDC2-209ENST00000609477 ABCA9Q8IUA7 1624 aa22.93■■□□□ 1.26
HDDC2-209ENST00000609477 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
HDDC2-209ENST00000609477 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
HDDC2-209ENST00000609477 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
HDDC2-209ENST00000609477 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
HDDC2-209ENST00000609477 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.26
HDDC2-209ENST00000609477 KDM6BO15054 1643 aa22.89■■□□□ 1.25
HDDC2-209ENST00000609477 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
HDDC2-209ENST00000609477 LRRIQ1Q96JM4 1722 aa22.84■■□□□ 1.25
HDDC2-209ENST00000609477 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
HDDC2-209ENST00000609477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.8■■□□□ 1.245e-7■■■□□ 15.7
HDDC2-209ENST00000609477 NEO1Q92859 1461 aa22.78■■□□□ 1.24
HDDC2-209ENST00000609477 KIF14Q15058 1648 aa22.76■■□□□ 1.23
HDDC2-209ENST00000609477 ARAP3Q8WWN8 1544 aa22.75■■□□□ 1.23
HDDC2-209ENST00000609477 COL17A1Q9UMD9 1497 aaPredicted RBP22.73■■□□□ 1.23
HDDC2-209ENST00000609477 TTC37Q6PGP7 1564 aa22.73■■□□□ 1.23
HDDC2-209ENST00000609477 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
HDDC2-209ENST00000609477 PLCH2O75038 1416 aa22.72■■□□□ 1.23
HDDC2-209ENST00000609477 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
HDDC2-209ENST00000609477 FANCAO15360 1455 aa22.68■■□□□ 1.22
HDDC2-209ENST00000609477 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
HDDC2-209ENST00000609477 AKNAQ7Z591 1439 aa22.65■■□□□ 1.22
HDDC2-209ENST00000609477 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
HDDC2-209ENST00000609477 EFCAB2Q5VUJ9 269 aa22.63■■□□□ 1.21
HDDC2-209ENST00000609477 MAP3K1Q13233 1512 aa22.6■■□□□ 1.21
HDDC2-209ENST00000609477 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
HDDC2-209ENST00000609477 DENND4BO75064 1496 aaPredicted RBP22.59■■□□□ 1.21
HDDC2-209ENST00000609477 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
HDDC2-209ENST00000609477 PREX2Q70Z35 1606 aa22.57■■□□□ 1.2
HDDC2-209ENST00000609477 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
HDDC2-209ENST00000609477 CDC42BPBQ9Y5S2 1711 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms