RNA–Protein interactions for RNA: ENST00000609439.2

GTF2IP13-202, Transcript of general transcription factor IIi pseudogene 13, humanhuman

TSL 5 BASIC

Gene GTF2IP13, Length 10,247 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP13-202ENST00000609439 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
GTF2IP13-202ENST00000609439 ACIN1Q9UKV3 1341 aaKnown RBP15.38■□□□□ 0.05
GTF2IP13-202ENST00000609439 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
GTF2IP13-202ENST00000609439 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
GTF2IP13-202ENST00000609439 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
GTF2IP13-202ENST00000609439 PDE4CQ08493 712 aa15.35■□□□□ 0.05
GTF2IP13-202ENST00000609439 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
GTF2IP13-202ENST00000609439 NRDCO43847 1150 aa15.34■□□□□ 0.05
GTF2IP13-202ENST00000609439 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
GTF2IP13-202ENST00000609439 TNNT3P45378 269 aaPredicted RBP15.33■□□□□ 0.05
GTF2IP13-202ENST00000609439 NPHP1O15259 732 aa15.33■□□□□ 0.04
GTF2IP13-202ENST00000609439 CASC1Q6TDU7 716 aa15.33■□□□□ 0.04
GTF2IP13-202ENST00000609439 PNNQ9H307 717 aaKnown RBP15.33■□□□□ 0.04
GTF2IP13-202ENST00000609439 KIAA2012Q0VF49 1180 aa15.31■□□□□ 0.04
GTF2IP13-202ENST00000609439 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
GTF2IP13-202ENST00000609439 FAM9BQ8IZU0 186 aa15.3■□□□□ 0.04
GTF2IP13-202ENST00000609439 ARID4BQ4LE39 1312 aaPredicted RBP15.3■□□□□ 0.04
GTF2IP13-202ENST00000609439 L1TD1Q5T7N2 865 aaKnown RBP15.29■□□□□ 0.04
GTF2IP13-202ENST00000609439 ARID3AQ99856 593 aa15.29■□□□□ 0.04
GTF2IP13-202ENST00000609439 A0A0U1RQG5 324 aaPredicted RBP15.29■□□□□ 0.04
GTF2IP13-202ENST00000609439 ERICH6BQ5W0A0 696 aa15.29■□□□□ 0.04
GTF2IP13-202ENST00000609439 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
GTF2IP13-202ENST00000609439 NAP1L2Q9ULW6 460 aaPredicted RBP15.29■□□□□ 0.04
GTF2IP13-202ENST00000609439 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
GTF2IP13-202ENST00000609439 KRI1Q8N9T8 703 aaKnown RBP15.27■□□□□ 0.03
GTF2IP13-202ENST00000609439 DRC7Q8IY82 874 aa15.26■□□□□ 0.03
GTF2IP13-202ENST00000609439 WDR43Q15061 677 aaKnown RBP eCLIP15.25■□□□□ 0.03
GTF2IP13-202ENST00000609439 ISY1Q9ULR0 285 aaKnown RBP15.24■□□□□ 0.03
GTF2IP13-202ENST00000609439 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
GTF2IP13-202ENST00000609439 FGD1P98174 961 aa15.22■□□□□ 0.03
GTF2IP13-202ENST00000609439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.03
GTF2IP13-202ENST00000609439 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
GTF2IP13-202ENST00000609439 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
GTF2IP13-202ENST00000609439 IRX6P78412 446 aaPredicted RBP15.17■□□□□ 0.02
GTF2IP13-202ENST00000609439 ANO8Q9HCE9 1232 aaPredicted RBP15.17■□□□□ 0.02
GTF2IP13-202ENST00000609439 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
GTF2IP13-202ENST00000609439 GOLGA2Q08379 1002 aa15.16■□□□□ 0.02
GTF2IP13-202ENST00000609439 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
GTF2IP13-202ENST00000609439 PATL2C9JE40 543 aaKnown RBP15.16■□□□□ 0.02
GTF2IP13-202ENST00000609439 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
GTF2IP13-202ENST00000609439 GOLGA6L1Q8N7Z2 621 aa15.14■□□□□ 0.01
GTF2IP13-202ENST00000609439 GOLGA6L4A6NEF3 574 aa15.13■□□□□ 0.01
GTF2IP13-202ENST00000609439 SETQ01105 290 aaPredicted RBP15.12■□□□□ 0.01
GTF2IP13-202ENST00000609439 TMC1Q8TDI8 760 aa15.12■□□□□ 0.01
GTF2IP13-202ENST00000609439 LAS1LQ9Y4W2 734 aaKnown RBP15.11■□□□□ 0.01
GTF2IP13-202ENST00000609439 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
GTF2IP13-202ENST00000609439 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
GTF2IP13-202ENST00000609439 KCNJ4P48050 445 aa15.1■□□□□ 0.01
GTF2IP13-202ENST00000609439 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
GTF2IP13-202ENST00000609439 GNL2Q13823 731 aaKnown RBP15.09■□□□□ 0.01
GTF2IP13-202ENST00000609439 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
GTF2IP13-202ENST00000609439 FTSJ3Q8IY81 847 aaKnown RBP15.05■□□□□ 0
GTF2IP13-202ENST00000609439 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
GTF2IP13-202ENST00000609439 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
GTF2IP13-202ENST00000609439 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
GTF2IP13-202ENST00000609439 TAF7LQ5H9L4 462 aa14.99□□□□□ -0.01
GTF2IP13-202ENST00000609439 MTUS2Q5JR59 1369 aa14.97□□□□□ -0.01
GTF2IP13-202ENST00000609439 DDX10Q13206 875 aaKnown RBP14.95□□□□□ -0.02
GTF2IP13-202ENST00000609439 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
GTF2IP13-202ENST00000609439 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
GTF2IP13-202ENST00000609439 PPM1GO15355 546 aaPredicted RBP14.94□□□□□ -0.02
GTF2IP13-202ENST00000609439 KCNH8Q96L42 1107 aa14.94□□□□□ -0.02
GTF2IP13-202ENST00000609439 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
GTF2IP13-202ENST00000609439 RRP12Q5JTH9 1297 aaKnown RBP14.93□□□□□ -0.02
GTF2IP13-202ENST00000609439 TSPY4P0CV99 314 aa14.92□□□□□ -0.02
GTF2IP13-202ENST00000609439 TSPY10P0CW01 314 aa14.92□□□□□ -0.02
GTF2IP13-202ENST00000609439 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
GTF2IP13-202ENST00000609439 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
GTF2IP13-202ENST00000609439 USP35Q9P2H5 1018 aa14.91□□□□□ -0.02
GTF2IP13-202ENST00000609439 APPP05067 770 aa14.91□□□□□ -0.02
GTF2IP13-202ENST00000609439 SPRYD3Q8NCJ5 442 aa14.91□□□□□ -0.02
GTF2IP13-202ENST00000609439 CREBRFQ8IUR6 639 aa14.9□□□□□ -0.02
GTF2IP13-202ENST00000609439 HSCBQ8IWL3 235 aa14.89□□□□□ -0.03
GTF2IP13-202ENST00000609439 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
GTF2IP13-202ENST00000609439 PTMSP20962 102 aa14.88□□□□□ -0.03
GTF2IP13-202ENST00000609439 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
GTF2IP13-202ENST00000609439 RGS3P49796 1198 aa14.87□□□□□ -0.03
GTF2IP13-202ENST00000609439 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
GTF2IP13-202ENST00000609439 RRP7BPQ9NSQ0 103 aa14.85□□□□□ -0.03
GTF2IP13-202ENST00000609439 TPM4P67936 248 aa14.84□□□□□ -0.03
GTF2IP13-202ENST00000609439 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
GTF2IP13-202ENST00000609439 MCCP23508 829 aa14.84□□□□□ -0.03
GTF2IP13-202ENST00000609439 VPS53Q5VIR6 699 aa14.83□□□□□ -0.03
GTF2IP13-202ENST00000609439 CLIP1P30622 1438 aa14.83□□□□□ -0.04
GTF2IP13-202ENST00000609439 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
GTF2IP13-202ENST00000609439 HIRIP3Q9BW71 556 aaPredicted RBP14.83□□□□□ -0.04
GTF2IP13-202ENST00000609439 LMOD2Q6P5Q4 547 aa14.83□□□□□ -0.04
GTF2IP13-202ENST00000609439 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.04
GTF2IP13-202ENST00000609439 RASSF8Q8NHQ8 419 aa14.82□□□□□ -0.04
GTF2IP13-202ENST00000609439 NOP58Q9Y2X3 529 aaKnown RBP14.82□□□□□ -0.04
GTF2IP13-202ENST00000609439 TPM3P06753 285 aa14.81□□□□□ -0.04
GTF2IP13-202ENST00000609439 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
GTF2IP13-202ENST00000609439 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
GTF2IP13-202ENST00000609439 NACADO15069 1562 aa14.77□□□□□ -0.04
GTF2IP13-202ENST00000609439 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
GTF2IP13-202ENST00000609439 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
GTF2IP13-202ENST00000609439 CCAR2Q8N163 923 aaKnown RBP14.75□□□□□ -0.05
GTF2IP13-202ENST00000609439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.05
GTF2IP13-202ENST00000609439 FRAT1Q92837 279 aaPredicted RBP14.74□□□□□ -0.05
GTF2IP13-202ENST00000609439 MAPK8IP3Q9UPT6 1336 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms