RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
USP6NL-205ENST00000609104 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
USP6NL-205ENST00000609104 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
USP6NL-205ENST00000609104 PTMAP06454 111 aaKnown RBP17.24■□□□□ 0.35
USP6NL-205ENST00000609104 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
USP6NL-205ENST00000609104 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
USP6NL-205ENST00000609104 ANP32EQ9BTT0 268 aa17.22■□□□□ 0.35
USP6NL-205ENST00000609104 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.35
USP6NL-205ENST00000609104 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
USP6NL-205ENST00000609104 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
USP6NL-205ENST00000609104 ZRSR1Q15695 479 aaKnown RBP17.17■□□□□ 0.34
USP6NL-205ENST00000609104 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
USP6NL-205ENST00000609104 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
USP6NL-205ENST00000609104 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
USP6NL-205ENST00000609104 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.33
USP6NL-205ENST00000609104 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
USP6NL-205ENST00000609104 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
USP6NL-205ENST00000609104 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
USP6NL-205ENST00000609104 TSPY4P0CV99 314 aa17.11■□□□□ 0.33
USP6NL-205ENST00000609104 TSPY10P0CW01 314 aa17.11■□□□□ 0.33
USP6NL-205ENST00000609104 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
USP6NL-205ENST00000609104 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
USP6NL-205ENST00000609104 FTSJ3Q8IY81 847 aaKnown RBP17.08■□□□□ 0.33
USP6NL-205ENST00000609104 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.33
USP6NL-205ENST00000609104 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
USP6NL-205ENST00000609104 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
USP6NL-205ENST00000609104 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
USP6NL-205ENST00000609104 PPM1GO15355 546 aaPredicted RBP17.04■□□□□ 0.32
USP6NL-205ENST00000609104 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
USP6NL-205ENST00000609104 HSP90AB1P08238 724 aaKnown RBP17■□□□□ 0.31
USP6NL-205ENST00000609104 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
USP6NL-205ENST00000609104 RGS3P49796 1198 aa16.98■□□□□ 0.31
USP6NL-205ENST00000609104 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
USP6NL-205ENST00000609104 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
USP6NL-205ENST00000609104 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
USP6NL-205ENST00000609104 PPP1R15AO75807 674 aaPredicted RBP16.96■□□□□ 0.31
USP6NL-205ENST00000609104 AMER1Q5JTC6 1135 aaPredicted RBP16.93■□□□□ 0.3
USP6NL-205ENST00000609104 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
USP6NL-205ENST00000609104 GOLGA6L6A8MZA4 724 aa16.92■□□□□ 0.3
USP6NL-205ENST00000609104 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
USP6NL-205ENST00000609104 PPP4R2Q9NY27 417 aa16.91■□□□□ 0.3
USP6NL-205ENST00000609104 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
USP6NL-205ENST00000609104 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
USP6NL-205ENST00000609104 FGD1P98174 961 aa16.89■□□□□ 0.29
USP6NL-205ENST00000609104 KCNH8Q96L42 1107 aa16.88■□□□□ 0.29
USP6NL-205ENST00000609104 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
USP6NL-205ENST00000609104 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
USP6NL-205ENST00000609104 KCNJ4P48050 445 aa16.86■□□□□ 0.29
USP6NL-205ENST00000609104 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
USP6NL-205ENST00000609104 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
USP6NL-205ENST00000609104 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
USP6NL-205ENST00000609104 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
USP6NL-205ENST00000609104 CHAF1AQ13111 956 aaPredicted RBP16.85■□□□□ 0.29
USP6NL-205ENST00000609104 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
USP6NL-205ENST00000609104 ARID4BQ4LE39 1312 aaPredicted RBP16.85■□□□□ 0.29
USP6NL-205ENST00000609104 CLIP1P30622 1438 aa16.84■□□□□ 0.29
USP6NL-205ENST00000609104 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
USP6NL-205ENST00000609104 CCDC180Q9P1Z9 1646 aa16.84■□□□□ 0.29
USP6NL-205ENST00000609104 DRC7Q8IY82 874 aa16.83■□□□□ 0.28
USP6NL-205ENST00000609104 NRDCO43847 1150 aa16.82■□□□□ 0.28
USP6NL-205ENST00000609104 HSCBQ8IWL3 235 aa16.82■□□□□ 0.28
USP6NL-205ENST00000609104 DEKP35659 375 aaKnown RBP16.81■□□□□ 0.28
USP6NL-205ENST00000609104 NPHP1O15259 732 aa16.81■□□□□ 0.28
USP6NL-205ENST00000609104 GOLGA6L4A6NEF3 574 aa16.81■□□□□ 0.28
USP6NL-205ENST00000609104 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
USP6NL-205ENST00000609104 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
USP6NL-205ENST00000609104 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
USP6NL-205ENST00000609104 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
USP6NL-205ENST00000609104 L1TD1Q5T7N2 865 aaKnown RBP16.77■□□□□ 0.27
USP6NL-205ENST00000609104 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
USP6NL-205ENST00000609104 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
USP6NL-205ENST00000609104 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
USP6NL-205ENST00000609104 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
USP6NL-205ENST00000609104 MS4A1P11836 297 aa16.73■□□□□ 0.27
USP6NL-205ENST00000609104 ARID3AQ99856 593 aa16.72■□□□□ 0.27
USP6NL-205ENST00000609104 POGKQ9P215 609 aa16.72■□□□□ 0.27
USP6NL-205ENST00000609104 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
USP6NL-205ENST00000609104 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
USP6NL-205ENST00000609104 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
USP6NL-205ENST00000609104 CLSTN1O94985 981 aa16.71■□□□□ 0.27
USP6NL-205ENST00000609104 MCCP23508 829 aa16.71■□□□□ 0.26
USP6NL-205ENST00000609104 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
USP6NL-205ENST00000609104 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
USP6NL-205ENST00000609104 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
USP6NL-205ENST00000609104 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
USP6NL-205ENST00000609104 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
USP6NL-205ENST00000609104 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
USP6NL-205ENST00000609104 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
USP6NL-205ENST00000609104 GNL2Q13823 731 aaKnown RBP16.64■□□□□ 0.25
USP6NL-205ENST00000609104 SOX12O15370 315 aa16.64■□□□□ 0.25
USP6NL-205ENST00000609104 APBB1O00213 710 aa16.62■□□□□ 0.25
USP6NL-205ENST00000609104 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
USP6NL-205ENST00000609104 TMF1P82094 1093 aa16.6■□□□□ 0.25
USP6NL-205ENST00000609104 KIAA2012Q0VF49 1180 aa16.59■□□□□ 0.25
USP6NL-205ENST00000609104 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
USP6NL-205ENST00000609104 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
USP6NL-205ENST00000609104 GBP4Q96PP9 640 aa16.58■□□□□ 0.24
USP6NL-205ENST00000609104 KIAA1211Q6ZU35 1233 aa16.57■□□□□ 0.24
USP6NL-205ENST00000609104 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
USP6NL-205ENST00000609104 SLKQ9H2G2 1235 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms