RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 POLR3GLQ9BT43 218 aa6.72□□□□□ -1.33
HDDC2-208ENST00000609021 MAPK8IP2Q13387 824 aaPredicted RBP6.72□□□□□ -1.33
HDDC2-208ENST00000609021 TPRNQ4KMQ1 711 aa6.72□□□□□ -1.33
HDDC2-208ENST00000609021 RSF1Q96T23 1441 aaPredicted RBP6.72□□□□□ -1.33
HDDC2-208ENST00000609021 AAMPQ13685 434 aa6.72□□□□□ -1.33
HDDC2-208ENST00000609021 PAXIP1Q6ZW49 1069 aaPredicted RBP6.71□□□□□ -1.33
HDDC2-208ENST00000609021 PRDM2Q13029 1718 aa6.71□□□□□ -1.34
HDDC2-208ENST00000609021 DIEXFQ68CQ4 756 aaKnown RBP6.7□□□□□ -1.34
HDDC2-208ENST00000609021 RTL5Q5HYW3 569 aaPredicted RBP6.66□□□□□ -1.34
HDDC2-208ENST00000609021 SMARCA2P51531 1590 aa6.66□□□□□ -1.34
HDDC2-208ENST00000609021 TOP2AP11388 1531 aaKnown RBP6.65□□□□□ -1.34
HDDC2-208ENST00000609021 TRIM26Q12899 539 aaPredicted RBP6.64□□□□□ -1.35
HDDC2-208ENST00000609021 BCANQ96GW7 911 aa6.63□□□□□ -1.35
HDDC2-208ENST00000609021 FBXO3Q9UK99 471 aa6.62□□□□□ -1.35
HDDC2-208ENST00000609021 LOC105371045A0A1W2PR82 267 aa6.62□□□□□ -1.35
HDDC2-208ENST00000609021 RSPH6AQ9H0K4 717 aa6.61□□□□□ -1.35
HDDC2-208ENST00000609021 HMGXB3Q12766 1538 aa6.61□□□□□ -1.35
HDDC2-208ENST00000609021 HSP90B1P14625 803 aaKnown RBP6.61□□□□□ -1.35
HDDC2-208ENST00000609021 SAMD1Q6SPF0 538 aaPredicted RBP6.61□□□□□ -1.35
HDDC2-208ENST00000609021 RBM19Q9Y4C8 960 aaKnown RBP6.59□□□□□ -1.35
HDDC2-208ENST00000609021 SUPT16HQ9Y5B9 1047 aaKnown RBP6.59□□□□□ -1.36
HDDC2-208ENST00000609021 IL27Q8NEV9 243 aa6.58□□□□□ -1.36
HDDC2-208ENST00000609021 NAP1L2Q9ULW6 460 aaPredicted RBP6.58□□□□□ -1.36
HDDC2-208ENST00000609021 KCNA4P22459 653 aa6.58□□□□□ -1.36
HDDC2-208ENST00000609021 IRX6P78412 446 aaPredicted RBP6.58□□□□□ -1.36
HDDC2-208ENST00000609021 RSPH4AQ5TD94 716 aa6.57□□□□□ -1.36
HDDC2-208ENST00000609021 BCCIPQ9P287 314 aaKnown RBP eCLIP6.56□□□□□ -1.36
HDDC2-208ENST00000609021 ATAD2BQ9ULI0 1458 aa6.56□□□□□ -1.36
HDDC2-208ENST00000609021 CC2D2AQ9P2K1 1620 aa6.55□□□□□ -1.36
HDDC2-208ENST00000609021 BBXQ8WY36 941 aaPredicted RBP6.54□□□□□ -1.36
HDDC2-208ENST00000609021 CNGB1Q14028 1251 aaPredicted RBP6.54□□□□□ -1.36
HDDC2-208ENST00000609021 NBR1Q14596 966 aa6.54□□□□□ -1.36
HDDC2-208ENST00000609021 CNKSR2Q8WXI2 1034 aa6.54□□□□□ -1.36
HDDC2-208ENST00000609021 HSP90AA2PQ14568 343 aaPredicted RBP6.53□□□□□ -1.36
HDDC2-208ENST00000609021 CANXP27824 592 aaKnown RBP6.53□□□□□ -1.36
HDDC2-208ENST00000609021 CHMP4BQ9H444 224 aaKnown RBP6.52□□□□□ -1.37
HDDC2-208ENST00000609021 NCAPD3P42695 1498 aa6.52□□□□□ -1.37
HDDC2-208ENST00000609021 SUPT5HO00267 1087 aaKnown RBP6.51□□□□□ -1.37
HDDC2-208ENST00000609021 NCLP19338 710 aaKnown RBP6.51□□□□□ -1.37
HDDC2-208ENST00000609021 CCDC88BA6NC98 1476 aa6.51□□□□□ -1.37
HDDC2-208ENST00000609021 BIVM-ERCC5R4GMW8 1640 aa6.5□□□□□ -1.37
HDDC2-208ENST00000609021 CCDC9Q9Y3X0 531 aaKnown RBP6.5□□□□□ -1.37
HDDC2-208ENST00000609021 HMGB1P09429 215 aaKnown RBP6.49□□□□□ -1.37
HDDC2-208ENST00000609021 WDR97A6NE52 1622 aa6.49□□□□□ -1.37
HDDC2-208ENST00000609021 ZNF316A6NFI3 1004 aaPredicted RBP6.49□□□□□ -1.37
HDDC2-208ENST00000609021 DCAF8L1A6NGE4 600 aa6.48□□□□□ -1.37
HDDC2-208ENST00000609021 IPO4Q8TEX9 1081 aaKnown RBP6.47□□□□□ -1.37
HDDC2-208ENST00000609021 ZFP91Q96JP5 570 aaPredicted RBP6.46□□□□□ -1.37
HDDC2-208ENST00000609021 FANCIQ9NVI1 1328 aa6.46□□□□□ -1.38
HDDC2-208ENST00000609021 CFAP44Q96MT7 982 aa6.45□□□□□ -1.38
HDDC2-208ENST00000609021 RRP9O43818 475 aaKnown RBP6.45□□□□□ -1.38
HDDC2-208ENST00000609021 HSP90AA1P07900 732 aaKnown RBP6.45□□□□□ -1.38
HDDC2-208ENST00000609021 PPP4R3CPQ6ZMV5 832 aa6.44□□□□□ -1.38
HDDC2-208ENST00000609021 PTMSP20962 102 aa6.43□□□□□ -1.38
HDDC2-208ENST00000609021 FTSJ3Q8IY81 847 aaKnown RBP6.43□□□□□ -1.38
HDDC2-208ENST00000609021 SYNJ1O43426 1573 aa6.43□□□□□ -1.38
HDDC2-208ENST00000609021 TMEM132AQ24JP5 1023 aa6.42□□□□□ -1.38
HDDC2-208ENST00000609021 CNPY4Q8N129 248 aa6.42□□□□□ -1.38
HDDC2-208ENST00000609021 PRDM10Q9NQV6 1147 aa6.42□□□□□ -1.38
HDDC2-208ENST00000609021 WWC1Q8IX03 1113 aa6.41□□□□□ -1.38
HDDC2-208ENST00000609021 KIF21AQ7Z4S6 1674 aa6.41□□□□□ -1.38
HDDC2-208ENST00000609021 TEX2Q8IWB9 1127 aa6.41□□□□□ -1.38
HDDC2-208ENST00000609021 PATL2C9JE40 543 aaKnown RBP6.4□□□□□ -1.38
HDDC2-208ENST00000609021 NEFMP07197 916 aa6.4□□□□□ -1.39
HDDC2-208ENST00000609021 SECISBP2LQ93073 1101 aaKnown RBP6.4□□□□□ -1.39
HDDC2-208ENST00000609021 TOP2BQ02880 1626 aa6.4□□□□□ -1.39
HDDC2-208ENST00000609021 UBTFP17480 764 aaKnown RBP6.39□□□□□ -1.39
HDDC2-208ENST00000609021 PABPN1Q86U42 306 aaKnown RBP eCLIP6.39□□□□□ -1.39
HDDC2-208ENST00000609021 PTMAP06454 111 aaKnown RBP6.38□□□□□ -1.39
HDDC2-208ENST00000609021 NOP58Q9Y2X3 529 aaKnown RBP6.38□□□□□ -1.39
HDDC2-208ENST00000609021 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.38□□□□□ -1.39
HDDC2-208ENST00000609021 CFTRP13569 1480 aa6.38□□□□□ -1.39
HDDC2-208ENST00000609021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.38□□□□□ -1.39
HDDC2-208ENST00000609021 ABCC8Q09428 1581 aa6.38□□□□□ -1.39
HDDC2-208ENST00000609021 APPP05067 770 aa6.38□□□□□ -1.39
HDDC2-208ENST00000609021 BAZ1BQ9UIG0 1483 aaKnown RBP6.38□□□□□ -1.39
HDDC2-208ENST00000609021 FKBP8Q14318 412 aa6.37□□□□□ -1.39
HDDC2-208ENST00000609021 PLCD3Q8N3E9 789 aa6.37□□□□□ -1.39
HDDC2-208ENST00000609021 DMRT2Q9Y5R5 561 aa6.37□□□□□ -1.39
HDDC2-208ENST00000609021 USP35Q9P2H5 1018 aa6.37□□□□□ -1.39
HDDC2-208ENST00000609021 ARID4BQ4LE39 1312 aaPredicted RBP6.37□□□□□ -1.39
HDDC2-208ENST00000609021 PPM1GO15355 546 aaPredicted RBP6.36□□□□□ -1.39
HDDC2-208ENST00000609021 ZNF592Q92610 1267 aa6.36□□□□□ -1.39
HDDC2-208ENST00000609021 TNNT2P45379 298 aaPredicted RBP6.36□□□□□ -1.39
HDDC2-208ENST00000609021 RGS3P49796 1198 aa6.35□□□□□ -1.39
HDDC2-208ENST00000609021 MIER1Q8N108 512 aa6.35□□□□□ -1.39
HDDC2-208ENST00000609021 PLCD4Q9BRC7 762 aa6.35□□□□□ -1.39
HDDC2-208ENST00000609021 CUX1P39880 1505 aa6.35□□□□□ -1.39
HDDC2-208ENST00000609021 TICAM2Q86XR7 235 aa6.34□□□□□ -1.39
HDDC2-208ENST00000609021 ZNF526Q8TF50 670 aaPredicted RBP6.34□□□□□ -1.39
HDDC2-208ENST00000609021 CLSTN1O94985 981 aa6.34□□□□□ -1.39
HDDC2-208ENST00000609021 THOC2Q8NI27 1593 aaKnown RBP6.34□□□□□ -1.39
HDDC2-208ENST00000609021 GTF2E1P29083 439 aaPredicted RBP6.34□□□□□ -1.39
HDDC2-208ENST00000609021 PSMD1Q99460 953 aa6.34□□□□□ -1.39
HDDC2-208ENST00000609021 IGSF3O75054 1194 aa6.33□□□□□ -1.4
HDDC2-208ENST00000609021 FAM193AP78312 1265 aa6.33□□□□□ -1.4
HDDC2-208ENST00000609021 LAMC3Q9Y6N6 1575 aa6.33□□□□□ -1.4
HDDC2-208ENST00000609021 C11orf95C9JLR9 678 aaPredicted RBP6.33□□□□□ -1.4
HDDC2-208ENST00000609021 PLCB2Q00722 1185 aa6.33□□□□□ -1.4
HDDC2-208ENST00000609021 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms