RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
CTCFL-219ENST00000608720 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
CTCFL-219ENST00000608720 SETD5Q9C0A6 1442 aa21.15■□□□□ 0.98
CTCFL-219ENST00000608720 PHLDB1Q86UU1 1377 aa21.11■□□□□ 0.97
CTCFL-219ENST00000608720 MAPKBP1O60336 1514 aa21.1■□□□□ 0.97
CTCFL-219ENST00000608720 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.96
CTCFL-219ENST00000608720 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
CTCFL-219ENST00000608720 TIMELESSQ9UNS1 1208 aa21.04■□□□□ 0.96
CTCFL-219ENST00000608720 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
CTCFL-219ENST00000608720 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.96
CTCFL-219ENST00000608720 P3H3Q8IVL6 736 aa21.02■□□□□ 0.96
CTCFL-219ENST00000608720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.01■□□□□ 0.95
CTCFL-219ENST00000608720 PCF11O94913 1555 aaKnown RBP21.01■□□□□ 0.95
CTCFL-219ENST00000608720 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
CTCFL-219ENST00000608720 EFCAB5A4FU69 1503 aa21■□□□□ 0.95
CTCFL-219ENST00000608720 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.954e-8■■■■□ 20.6
CTCFL-219ENST00000608720 FYCO1Q9BQS8 1478 aa21■□□□□ 0.95
CTCFL-219ENST00000608720 CASKIN1Q8WXD9 1431 aa20.99■□□□□ 0.95
CTCFL-219ENST00000608720 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
CTCFL-219ENST00000608720 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
CTCFL-219ENST00000608720 FHOD3Q2V2M9 1422 aa20.97■□□□□ 0.95
CTCFL-219ENST00000608720 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
CTCFL-219ENST00000608720 RAD54L2Q9Y4B4 1467 aa20.97■□□□□ 0.95
CTCFL-219ENST00000608720 TOPBP1Q92547 1522 aa20.96■□□□□ 0.95
CTCFL-219ENST00000608720 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
CTCFL-219ENST00000608720 SUPT16HQ9Y5B9 1047 aaKnown RBP20.95■□□□□ 0.94
CTCFL-219ENST00000608720 SIN3AQ96ST3 1273 aa20.94■□□□□ 0.94
CTCFL-219ENST00000608720 ANP32EQ9BTT0 268 aa20.94■□□□□ 0.94
CTCFL-219ENST00000608720 CUL7Q14999 1698 aa20.92■□□□□ 0.94
CTCFL-219ENST00000608720 FMN1Q68DA7 1419 aa20.9■□□□□ 0.94
CTCFL-219ENST00000608720 KIF21AQ7Z4S6 1674 aa20.89■□□□□ 0.94
CTCFL-219ENST00000608720 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
CTCFL-219ENST00000608720 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
CTCFL-219ENST00000608720 PPP1R15AO75807 674 aaPredicted RBP20.85■□□□□ 0.93
CTCFL-219ENST00000608720 FGD6Q6ZV73 1430 aa20.84■□□□□ 0.93
CTCFL-219ENST00000608720 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
CTCFL-219ENST00000608720 BCL11AQ9H165 835 aa20.83■□□□□ 0.93
CTCFL-219ENST00000608720 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
CTCFL-219ENST00000608720 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
CTCFL-219ENST00000608720 SNAPC4Q5SXM2 1469 aa20.8■□□□□ 0.92
CTCFL-219ENST00000608720 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
CTCFL-219ENST00000608720 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
CTCFL-219ENST00000608720 HFM1A2PYH4 1435 aa20.75■□□□□ 0.91
CTCFL-219ENST00000608720 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
CTCFL-219ENST00000608720 CCER2I3L3R5 266 aa20.74■□□□□ 0.91
CTCFL-219ENST00000608720 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
CTCFL-219ENST00000608720 UACAQ9BZF9 1416 aa20.73■□□□□ 0.91
CTCFL-219ENST00000608720 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
CTCFL-219ENST00000608720 SAMD9Q5K651 1589 aa20.73■□□□□ 0.91
CTCFL-219ENST00000608720 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
CTCFL-219ENST00000608720 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
CTCFL-219ENST00000608720 PTPRKQ15262 1439 aa20.7■□□□□ 0.9
CTCFL-219ENST00000608720 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
CTCFL-219ENST00000608720 MYOM3Q5VTT5 1437 aa20.7■□□□□ 0.9
CTCFL-219ENST00000608720 ANP32CO43423 234 aa20.7■□□□□ 0.9
CTCFL-219ENST00000608720 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
CTCFL-219ENST00000608720 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
CTCFL-219ENST00000608720 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
CTCFL-219ENST00000608720 PTPN23Q9H3S7 1636 aa20.66■□□□□ 0.9
CTCFL-219ENST00000608720 NAIPQ13075 1403 aa20.66■□□□□ 0.9
CTCFL-219ENST00000608720 HIRIP3Q9BW71 556 aaPredicted RBP20.65■□□□□ 0.9
CTCFL-219ENST00000608720 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.89
CTCFL-219ENST00000608720 MRC2Q9UBG0 1479 aa20.63■□□□□ 0.89
CTCFL-219ENST00000608720 SUPT6HQ7KZ85 1726 aaKnown RBP20.61■□□□□ 0.89
CTCFL-219ENST00000608720 ARHGEF11O15085 1522 aa20.58■□□□□ 0.89
CTCFL-219ENST00000608720 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.89
CTCFL-219ENST00000608720 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
CTCFL-219ENST00000608720 FKBP8Q14318 412 aa20.57■□□□□ 0.88
CTCFL-219ENST00000608720 TCOF1Q13428 1488 aaKnown RBP20.55■□□□□ 0.88
CTCFL-219ENST00000608720 NEFLP07196 543 aa20.53■□□□□ 0.88
CTCFL-219ENST00000608720 WDR62O43379 1518 aa20.51■□□□□ 0.87
CTCFL-219ENST00000608720 AKNAQ7Z591 1439 aa20.51■□□□□ 0.87
CTCFL-219ENST00000608720 MAGI3Q5TCQ9 1506 aa20.5■□□□□ 0.87
CTCFL-219ENST00000608720 KDM5BQ9UGL1 1544 aa20.5■□□□□ 0.87
CTCFL-219ENST00000608720 TRIM52Q96A61 297 aa20.49■□□□□ 0.87
CTCFL-219ENST00000608720 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
CTCFL-219ENST00000608720 BCANQ96GW7 911 aa20.49■□□□□ 0.87
CTCFL-219ENST00000608720 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
CTCFL-219ENST00000608720 HECW1Q76N89 1606 aa20.48■□□□□ 0.87
CTCFL-219ENST00000608720 MIA2Q96PC5 1412 aa20.47■□□□□ 0.87
CTCFL-219ENST00000608720 CHIC2Q9UKJ5 165 aa20.46■□□□□ 0.87
CTCFL-219ENST00000608720 EPRSP07814 1512 aaKnown RBP20.45■□□□□ 0.86
CTCFL-219ENST00000608720 IQGAP2Q13576 1575 aa20.42■□□□□ 0.86
CTCFL-219ENST00000608720 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
CTCFL-219ENST00000608720 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
CTCFL-219ENST00000608720 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
CTCFL-219ENST00000608720 DENND4BO75064 1496 aaPredicted RBP20.4■□□□□ 0.86
CTCFL-219ENST00000608720 EIF4G2P78344 907 aaKnown RBP eCLIP20.39■□□□□ 0.85
CTCFL-219ENST00000608720 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
CTCFL-219ENST00000608720 WASHC2AQ641Q2 1341 aa20.37■□□□□ 0.85
CTCFL-219ENST00000608720 ADAMTS12P58397 1594 aa20.36■□□□□ 0.85
CTCFL-219ENST00000608720 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
CTCFL-219ENST00000608720 ROCK1Q13464 1354 aa20.35■□□□□ 0.85
CTCFL-219ENST00000608720 CDK13Q14004 1512 aaKnown RBP20.34■□□□□ 0.85
CTCFL-219ENST00000608720 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.84
CTCFL-219ENST00000608720 KDM6BO15054 1643 aa20.32■□□□□ 0.84
CTCFL-219ENST00000608720 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
CTCFL-219ENST00000608720 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
CTCFL-219ENST00000608720 DAPK1P53355 1430 aa20.28■□□□□ 0.84
CTCFL-219ENST00000608720 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms