RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
CTCFL-216ENST00000608263 CCNB3Q8WWL7 1395 aa14.35□□□□□ -0.11
CTCFL-216ENST00000608263 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
CTCFL-216ENST00000608263 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
CTCFL-216ENST00000608263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.121e-10■□□□□ 8.3
CTCFL-216ENST00000608263 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
CTCFL-216ENST00000608263 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
CTCFL-216ENST00000608263 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
CTCFL-216ENST00000608263 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
CTCFL-216ENST00000608263 SMARCA4P51532 1647 aa14.28□□□□□ -0.12
CTCFL-216ENST00000608263 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
CTCFL-216ENST00000608263 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.13
CTCFL-216ENST00000608263 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
CTCFL-216ENST00000608263 MRS2Q9HD23 443 aa14.25□□□□□ -0.13
CTCFL-216ENST00000608263 TDRD9Q8NDG6 1382 aaKnown RBP14.25□□□□□ -0.13
CTCFL-216ENST00000608263 ANP32EQ9BTT0 268 aa14.24□□□□□ -0.13
CTCFL-216ENST00000608263 ESF1Q9H501 851 aaKnown RBP14.23□□□□□ -0.13
CTCFL-216ENST00000608263 CUX2O14529 1486 aa14.21□□□□□ -0.13
CTCFL-216ENST00000608263 NPM2Q86SE8 214 aaKnown RBP14.2□□□□□ -0.14
CTCFL-216ENST00000608263 CARMIL1Q5VZK9 1371 aa14.19□□□□□ -0.14
CTCFL-216ENST00000608263 EIF4G1Q04637 1599 aaKnown RBP14.18□□□□□ -0.14
CTCFL-216ENST00000608263 RTL5Q5HYW3 569 aaPredicted RBP14.18□□□□□ -0.14
CTCFL-216ENST00000608263 NBR1Q14596 966 aa14.18□□□□□ -0.14
CTCFL-216ENST00000608263 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
CTCFL-216ENST00000608263 FOXD1Q16676 465 aa14.17□□□□□ -0.14
CTCFL-216ENST00000608263 SETD5Q9C0A6 1442 aa14.17□□□□□ -0.14
CTCFL-216ENST00000608263 KDM2AQ9Y2K7 1162 aa14.16□□□□□ -0.14
CTCFL-216ENST00000608263 TSPY4P0CV99 314 aa14.15□□□□□ -0.14
CTCFL-216ENST00000608263 TSPY10P0CW01 314 aa14.15□□□□□ -0.14
CTCFL-216ENST00000608263 RBM19Q9Y4C8 960 aaKnown RBP14.15□□□□□ -0.14
CTCFL-216ENST00000608263 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
CTCFL-216ENST00000608263 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
CTCFL-216ENST00000608263 PLEKHD1A6NEE1 506 aa14.15□□□□□ -0.14
CTCFL-216ENST00000608263 DAXXQ9UER7 740 aaPredicted RBP14.14□□□□□ -0.15
CTCFL-216ENST00000608263 B4GALNT3Q6L9W6 998 aa14.12□□□□□ -0.15
CTCFL-216ENST00000608263 PPP1R15AO75807 674 aaPredicted RBP14.12□□□□□ -0.15
CTCFL-216ENST00000608263 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
CTCFL-216ENST00000608263 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
CTCFL-216ENST00000608263 KIF21BO75037 1637 aa14.1□□□□□ -0.15
CTCFL-216ENST00000608263 CCDC136Q96JN2 1154 aa14.1□□□□□ -0.15
CTCFL-216ENST00000608263 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
CTCFL-216ENST00000608263 TMC1Q8TDI8 760 aa14.09□□□□□ -0.15
CTCFL-216ENST00000608263 HSPA5P11021 654 aaKnown RBP14.07□□□□□ -0.16
CTCFL-216ENST00000608263 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
CTCFL-216ENST00000608263 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
CTCFL-216ENST00000608263 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
CTCFL-216ENST00000608263 ANP32AP39687 249 aaKnown RBP14.06□□□□□ -0.16
CTCFL-216ENST00000608263 FHOD3Q2V2M9 1422 aa14.06□□□□□ -0.16
CTCFL-216ENST00000608263 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
CTCFL-216ENST00000608263 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
CTCFL-216ENST00000608263 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
CTCFL-216ENST00000608263 ARID4BQ4LE39 1312 aaPredicted RBP14.02□□□□□ -0.16
CTCFL-216ENST00000608263 CCER2I3L3R5 266 aa14.02□□□□□ -0.17
CTCFL-216ENST00000608263 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.17
CTCFL-216ENST00000608263 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
CTCFL-216ENST00000608263 SLC24A1O60721 1099 aa14□□□□□ -0.17
CTCFL-216ENST00000608263 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
CTCFL-216ENST00000608263 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
CTCFL-216ENST00000608263 MLECQ14165 292 aa13.97□□□□□ -0.17
CTCFL-216ENST00000608263 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
CTCFL-216ENST00000608263 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
CTCFL-216ENST00000608263 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
CTCFL-216ENST00000608263 IGF1RP08069 1367 aa13.95□□□□□ -0.18
CTCFL-216ENST00000608263 L3MBTL2Q969R5 705 aa13.95□□□□□ -0.18
CTCFL-216ENST00000608263 ZBTB47Q9UFB7 747 aaPredicted RBP13.94□□□□□ -0.18
CTCFL-216ENST00000608263 NCAPD3P42695 1498 aa13.92□□□□□ -0.18
CTCFL-216ENST00000608263 MPHOSPH9Q99550 1183 aa13.92□□□□□ -0.18
CTCFL-216ENST00000608263 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
CTCFL-216ENST00000608263 CARD11Q9BXL7 1154 aa13.9□□□□□ -0.18
CTCFL-216ENST00000608263 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
CTCFL-216ENST00000608263 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
CTCFL-216ENST00000608263 RRBP1Q9P2E9 1410 aaKnown RBP13.87□□□□□ -0.19
CTCFL-216ENST00000608263 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
CTCFL-216ENST00000608263 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
CTCFL-216ENST00000608263 LAS1LQ9Y4W2 734 aaKnown RBP13.84□□□□□ -0.19
CTCFL-216ENST00000608263 NESP48681 1621 aa13.84□□□□□ -0.19
CTCFL-216ENST00000608263 RAD54L2Q9Y4B4 1467 aa13.83□□□□□ -0.2
CTCFL-216ENST00000608263 CCDC184Q52MB2 194 aa13.82□□□□□ -0.2
CTCFL-216ENST00000608263 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
CTCFL-216ENST00000608263 GGT6Q6P531 493 aa13.82□□□□□ -0.2
CTCFL-216ENST00000608263 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
CTCFL-216ENST00000608263 PKD2Q13563 968 aa13.82□□□□□ -0.2
CTCFL-216ENST00000608263 CC2D1BQ5T0F9 858 aaKnown RBP13.82□□□□□ -0.2
CTCFL-216ENST00000608263 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
CTCFL-216ENST00000608263 PEG3Q9GZU2 1588 aa13.81□□□□□ -0.2
CTCFL-216ENST00000608263 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
CTCFL-216ENST00000608263 NOP58Q9Y2X3 529 aaKnown RBP13.81□□□□□ -0.2
CTCFL-216ENST00000608263 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
CTCFL-216ENST00000608263 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-216ENST00000608263 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
CTCFL-216ENST00000608263 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
CTCFL-216ENST00000608263 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
CTCFL-216ENST00000608263 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
CTCFL-216ENST00000608263 CUX1P39880 1505 aa13.78□□□□□ -0.2
CTCFL-216ENST00000608263 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
CTCFL-216ENST00000608263 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
CTCFL-216ENST00000608263 ARXQ96QS3 562 aa13.77□□□□□ -0.21
CTCFL-216ENST00000608263 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-216ENST00000608263 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
CTCFL-216ENST00000608263 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.213e-6■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms