RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 CUL7Q14999 1698 aa22.96■■□□□ 1.27
AC009961.1-203ENST00000607836 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
AC009961.1-203ENST00000607836 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.26
AC009961.1-203ENST00000607836 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.25
AC009961.1-203ENST00000607836 TIAM1Q13009 1591 aa22.87■■□□□ 1.25
AC009961.1-203ENST00000607836 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
AC009961.1-203ENST00000607836 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
AC009961.1-203ENST00000607836 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
AC009961.1-203ENST00000607836 RRBP1Q9P2E9 1410 aaKnown RBP22.84■■□□□ 1.25
AC009961.1-203ENST00000607836 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
AC009961.1-203ENST00000607836 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
AC009961.1-203ENST00000607836 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
AC009961.1-203ENST00000607836 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
AC009961.1-203ENST00000607836 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
AC009961.1-203ENST00000607836 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
AC009961.1-203ENST00000607836 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
AC009961.1-203ENST00000607836 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
AC009961.1-203ENST00000607836 CASKIN1Q8WXD9 1431 aa22.72■■□□□ 1.23
AC009961.1-203ENST00000607836 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
AC009961.1-203ENST00000607836 FYCO1Q9BQS8 1478 aa22.7■■□□□ 1.22
AC009961.1-203ENST00000607836 DHX57Q6P158 1386 aaKnown RBP22.7■■□□□ 1.22
AC009961.1-203ENST00000607836 FMN1Q68DA7 1419 aa22.69■■□□□ 1.22
AC009961.1-203ENST00000607836 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
AC009961.1-203ENST00000607836 WDR62O43379 1518 aa22.68■■□□□ 1.22
AC009961.1-203ENST00000607836 CFAP43Q8NDM7 1665 aa22.68■■□□□ 1.22
AC009961.1-203ENST00000607836 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
AC009961.1-203ENST00000607836 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
AC009961.1-203ENST00000607836 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
AC009961.1-203ENST00000607836 ADAMTS12P58397 1594 aa22.65■■□□□ 1.22
AC009961.1-203ENST00000607836 SAMD9Q5K651 1589 aa22.65■■□□□ 1.22
AC009961.1-203ENST00000607836 FBLN2P98095 1184 aa22.65■■□□□ 1.22
AC009961.1-203ENST00000607836 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
AC009961.1-203ENST00000607836 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
AC009961.1-203ENST00000607836 LRRIQ1Q96JM4 1722 aa22.6■■□□□ 1.21
AC009961.1-203ENST00000607836 ZNF316A6NFI3 1004 aaPredicted RBP22.59■■□□□ 1.21
AC009961.1-203ENST00000607836 IQGAP2Q13576 1575 aa22.58■■□□□ 1.2
AC009961.1-203ENST00000607836 EIF4G3O43432 1585 aaKnown RBP22.57■■□□□ 1.2
AC009961.1-203ENST00000607836 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
AC009961.1-203ENST00000607836 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
AC009961.1-203ENST00000607836 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
AC009961.1-203ENST00000607836 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
AC009961.1-203ENST00000607836 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
AC009961.1-203ENST00000607836 MAGI3Q5TCQ9 1506 aa22.46■■□□□ 1.19
AC009961.1-203ENST00000607836 NCOA2Q15596 1464 aa22.46■■□□□ 1.19
AC009961.1-203ENST00000607836 CDK13Q14004 1512 aaKnown RBP22.45■■□□□ 1.18
AC009961.1-203ENST00000607836 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
AC009961.1-203ENST00000607836 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
AC009961.1-203ENST00000607836 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
AC009961.1-203ENST00000607836 SIN3AQ96ST3 1273 aa22.4■■□□□ 1.18
AC009961.1-203ENST00000607836 PTPRKQ15262 1439 aa22.39■■□□□ 1.17
AC009961.1-203ENST00000607836 DISP1Q96F81 1524 aa22.39■■□□□ 1.17
AC009961.1-203ENST00000607836 EPRSP07814 1512 aaKnown RBP22.38■■□□□ 1.17
AC009961.1-203ENST00000607836 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
AC009961.1-203ENST00000607836 UGGT2Q9NYU1 1516 aa22.38■■□□□ 1.17
AC009961.1-203ENST00000607836 MYOM3Q5VTT5 1437 aa22.36■■□□□ 1.17
AC009961.1-203ENST00000607836 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
AC009961.1-203ENST00000607836 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
AC009961.1-203ENST00000607836 SUPT6HQ7KZ85 1726 aaKnown RBP22.34■■□□□ 1.17
AC009961.1-203ENST00000607836 EHBP1L1Q8N3D4 1523 aa22.34■■□□□ 1.17
AC009961.1-203ENST00000607836 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
AC009961.1-203ENST00000607836 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
AC009961.1-203ENST00000607836 SYNJ2O15056 1496 aa22.33■■□□□ 1.17
AC009961.1-203ENST00000607836 KIAA0556O60303 1618 aa22.33■■□□□ 1.17
AC009961.1-203ENST00000607836 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.16
AC009961.1-203ENST00000607836 RRP7BPQ9NSQ0 103 aa22.31■■□□□ 1.16
AC009961.1-203ENST00000607836 JPH4Q96JJ6 628 aa22.31■■□□□ 1.16
AC009961.1-203ENST00000607836 MIER1Q8N108 512 aa22.29■■□□□ 1.16
AC009961.1-203ENST00000607836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
AC009961.1-203ENST00000607836 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
AC009961.1-203ENST00000607836 PTPN23Q9H3S7 1636 aa22.25■■□□□ 1.15
AC009961.1-203ENST00000607836 NUP153P49790 1475 aaKnown RBP22.25■■□□□ 1.15
AC009961.1-203ENST00000607836 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
AC009961.1-203ENST00000607836 ZNF644Q9H582 1327 aaPredicted RBP22.22■■□□□ 1.15
AC009961.1-203ENST00000607836 ARHGEF11O15085 1522 aa22.22■■□□□ 1.15
AC009961.1-203ENST00000607836 RAPGEF6Q8TEU7 1601 aa22.19■■□□□ 1.14
AC009961.1-203ENST00000607836 NAIPQ13075 1403 aa22.19■■□□□ 1.14
AC009961.1-203ENST00000607836 NUP160Q12769 1436 aa22.18■■□□□ 1.14
AC009961.1-203ENST00000607836 HFM1A2PYH4 1435 aa22.18■■□□□ 1.14
AC009961.1-203ENST00000607836 PRG4Q92954 1404 aaPredicted RBP22.18■■□□□ 1.14
AC009961.1-203ENST00000607836 TRIM52Q96A61 297 aa22.14■■□□□ 1.13
AC009961.1-203ENST00000607836 CARMIL2Q6F5E8 1435 aa22.13■■□□□ 1.13
AC009961.1-203ENST00000607836 ZNF777Q9ULD5 760 aaPredicted RBP22.13■■□□□ 1.13
AC009961.1-203ENST00000607836 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
AC009961.1-203ENST00000607836 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
AC009961.1-203ENST00000607836 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
AC009961.1-203ENST00000607836 TCOF1Q13428 1488 aaKnown RBP22.09■■□□□ 1.13
AC009961.1-203ENST00000607836 UACAQ9BZF9 1416 aa22.07■■□□□ 1.12
AC009961.1-203ENST00000607836 KDM6BO15054 1643 aa22.07■■□□□ 1.12
AC009961.1-203ENST00000607836 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
AC009961.1-203ENST00000607836 FOXD1Q16676 465 aa22.06■■□□□ 1.12
AC009961.1-203ENST00000607836 CFDP1Q9UEE9 299 aaPredicted RBP22.05■■□□□ 1.12
AC009961.1-203ENST00000607836 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
AC009961.1-203ENST00000607836 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
AC009961.1-203ENST00000607836 KIF14Q15058 1648 aa22.02■■□□□ 1.12
AC009961.1-203ENST00000607836 PPP1R15AO75807 674 aaPredicted RBP22■■□□□ 1.11
AC009961.1-203ENST00000607836 CHD1O14646 1710 aa22■■□□□ 1.11
AC009961.1-203ENST00000607836 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
AC009961.1-203ENST00000607836 DAPK1P53355 1430 aa21.99■■□□□ 1.11
AC009961.1-203ENST00000607836 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
AC009961.1-203ENST00000607836 ABCC5O15440 1437 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms