RNA–Protein interactions for RNA: ENST00000604860.3

UBE3A-206, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-206ENST00000604860 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
UBE3A-206ENST00000604860 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
UBE3A-206ENST00000604860 GSE1Q14687 1217 aa12.7□□□□□ -0.38
UBE3A-206ENST00000604860 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
UBE3A-206ENST00000604860 PKD2Q13563 968 aa12.69□□□□□ -0.38
UBE3A-206ENST00000604860 PYGBP11216 843 aa12.68□□□□□ -0.38
UBE3A-206ENST00000604860 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
UBE3A-206ENST00000604860 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
UBE3A-206ENST00000604860 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
UBE3A-206ENST00000604860 MAP3K13O43283 966 aa12.62□□□□□ -0.39
UBE3A-206ENST00000604860 GABBR2O75899 941 aa12.59□□□□□ -0.39
UBE3A-206ENST00000604860 MS4A3Q96HJ5 214 aa12.58□□□□□ -0.4
UBE3A-206ENST00000604860 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
UBE3A-206ENST00000604860 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
UBE3A-206ENST00000604860 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
UBE3A-206ENST00000604860 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
UBE3A-206ENST00000604860 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
UBE3A-206ENST00000604860 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
UBE3A-206ENST00000604860 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
UBE3A-206ENST00000604860 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
UBE3A-206ENST00000604860 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
UBE3A-206ENST00000604860 RGL2O15211 777 aa12.51□□□□□ -0.41
UBE3A-206ENST00000604860 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
UBE3A-206ENST00000604860 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
UBE3A-206ENST00000604860 CLCN6P51797 869 aa12.42□□□□□ -0.42
UBE3A-206ENST00000604860 ZNF467Q7Z7K2 595 aaPredicted RBP12.41□□□□□ -0.42
UBE3A-206ENST00000604860 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
UBE3A-206ENST00000604860 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
UBE3A-206ENST00000604860 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
UBE3A-206ENST00000604860 PSEN1P49768 467 aa12.34□□□□□ -0.43
UBE3A-206ENST00000604860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
UBE3A-206ENST00000604860 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
UBE3A-206ENST00000604860 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
UBE3A-206ENST00000604860 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
UBE3A-206ENST00000604860 TIE1P35590 1138 aa12.32□□□□□ -0.44
UBE3A-206ENST00000604860 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
UBE3A-206ENST00000604860 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
UBE3A-206ENST00000604860 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
UBE3A-206ENST00000604860 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
UBE3A-206ENST00000604860 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
UBE3A-206ENST00000604860 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
UBE3A-206ENST00000604860 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
UBE3A-206ENST00000604860 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
UBE3A-206ENST00000604860 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
UBE3A-206ENST00000604860 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
UBE3A-206ENST00000604860 STK25O00506 426 aa12.22□□□□□ -0.45
UBE3A-206ENST00000604860 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
UBE3A-206ENST00000604860 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
UBE3A-206ENST00000604860 STK24Q9Y6E0 443 aa12.21□□□□□ -0.45
UBE3A-206ENST00000604860 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
UBE3A-206ENST00000604860 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
UBE3A-206ENST00000604860 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
UBE3A-206ENST00000604860 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
UBE3A-206ENST00000604860 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
UBE3A-206ENST00000604860 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-206ENST00000604860 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
UBE3A-206ENST00000604860 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
UBE3A-206ENST00000604860 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
UBE3A-206ENST00000604860 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
UBE3A-206ENST00000604860 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
UBE3A-206ENST00000604860 C7P10643 843 aa12.06□□□□□ -0.48
UBE3A-206ENST00000604860 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
UBE3A-206ENST00000604860 IER5LQ5T953 404 aa12.05□□□□□ -0.48
UBE3A-206ENST00000604860 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
UBE3A-206ENST00000604860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■■■□ 19.4
UBE3A-206ENST00000604860 POTEB2H3BUK9 544 aa12.02□□□□□ -0.49
UBE3A-206ENST00000604860 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
UBE3A-206ENST00000604860 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
UBE3A-206ENST00000604860 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
UBE3A-206ENST00000604860 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
UBE3A-206ENST00000604860 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
UBE3A-206ENST00000604860 SOX12O15370 315 aa12□□□□□ -0.49
UBE3A-206ENST00000604860 SEC24BO95487 1268 aa12□□□□□ -0.49
UBE3A-206ENST00000604860 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
UBE3A-206ENST00000604860 PLCG2P16885 1265 aa11.99□□□□□ -0.49
UBE3A-206ENST00000604860 OCEL1Q9H607 264 aa11.98□□□□□ -0.49
UBE3A-206ENST00000604860 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
UBE3A-206ENST00000604860 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
UBE3A-206ENST00000604860 NLRP6P59044 892 aa11.94□□□□□ -0.5
UBE3A-206ENST00000604860 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
UBE3A-206ENST00000604860 PPP1R37O75864 691 aa11.92□□□□□ -0.5
UBE3A-206ENST00000604860 LHX8Q68G74 356 aa11.87□□□□□ -0.51
UBE3A-206ENST00000604860 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
UBE3A-206ENST00000604860 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
UBE3A-206ENST00000604860 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
UBE3A-206ENST00000604860 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
UBE3A-206ENST00000604860 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
UBE3A-206ENST00000604860 SPRYD3Q8NCJ5 442 aa11.8□□□□□ -0.52
UBE3A-206ENST00000604860 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
UBE3A-206ENST00000604860 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
UBE3A-206ENST00000604860 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
UBE3A-206ENST00000604860 RYDENQ9NUL5 291 aaKnown RBP11.75□□□□□ -0.53
UBE3A-206ENST00000604860 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
UBE3A-206ENST00000604860 G3V3G9 751 aa11.72□□□□□ -0.53
UBE3A-206ENST00000604860 PLCB2Q00722 1185 aa11.71□□□□□ -0.53
UBE3A-206ENST00000604860 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
UBE3A-206ENST00000604860 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
UBE3A-206ENST00000604860 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
UBE3A-206ENST00000604860 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
UBE3A-206ENST00000604860 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms