RNA–Protein interactions for RNA: ENST00000604754.1

ZSWIM8-222, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-222ENST00000604754 NEUROD1Q13562 356 aa16.78■□□□□ 0.28
ZSWIM8-222ENST00000604754 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.27
ZSWIM8-222ENST00000604754 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
ZSWIM8-222ENST00000604754 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
ZSWIM8-222ENST00000604754 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
ZSWIM8-222ENST00000604754 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
ZSWIM8-222ENST00000604754 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
ZSWIM8-222ENST00000604754 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
ZSWIM8-222ENST00000604754 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
ZSWIM8-222ENST00000604754 DIEXFQ68CQ4 756 aaKnown RBP16.68■□□□□ 0.26
ZSWIM8-222ENST00000604754 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
ZSWIM8-222ENST00000604754 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
ZSWIM8-222ENST00000604754 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
ZSWIM8-222ENST00000604754 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
ZSWIM8-222ENST00000604754 RRP7BPQ9NSQ0 103 aa16.63■□□□□ 0.25
ZSWIM8-222ENST00000604754 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
ZSWIM8-222ENST00000604754 SIN3AQ96ST3 1273 aa16.59■□□□□ 0.25
ZSWIM8-222ENST00000604754 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
ZSWIM8-222ENST00000604754 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
ZSWIM8-222ENST00000604754 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
ZSWIM8-222ENST00000604754 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
ZSWIM8-222ENST00000604754 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
ZSWIM8-222ENST00000604754 JPH4Q96JJ6 628 aa16.55■□□□□ 0.24
ZSWIM8-222ENST00000604754 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
ZSWIM8-222ENST00000604754 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
ZSWIM8-222ENST00000604754 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
ZSWIM8-222ENST00000604754 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
ZSWIM8-222ENST00000604754 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
ZSWIM8-222ENST00000604754 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
ZSWIM8-222ENST00000604754 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
ZSWIM8-222ENST00000604754 CUL7Q14999 1698 aa16.46■□□□□ 0.23
ZSWIM8-222ENST00000604754 ZNF644Q9H582 1327 aaPredicted RBP16.46■□□□□ 0.23
ZSWIM8-222ENST00000604754 CDK11AQ9UQ88 783 aaPredicted RBP16.46■□□□□ 0.23
ZSWIM8-222ENST00000604754 CASKIN1Q8WXD9 1431 aa16.46■□□□□ 0.23
ZSWIM8-222ENST00000604754 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
ZSWIM8-222ENST00000604754 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
ZSWIM8-222ENST00000604754 FOXD1Q16676 465 aa16.44■□□□□ 0.22
ZSWIM8-222ENST00000604754 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
ZSWIM8-222ENST00000604754 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
ZSWIM8-222ENST00000604754 SETD5Q9C0A6 1442 aa16.4■□□□□ 0.22
ZSWIM8-222ENST00000604754 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
ZSWIM8-222ENST00000604754 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
ZSWIM8-222ENST00000604754 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
ZSWIM8-222ENST00000604754 MIER1Q8N108 512 aa16.38■□□□□ 0.21
ZSWIM8-222ENST00000604754 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
ZSWIM8-222ENST00000604754 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
ZSWIM8-222ENST00000604754 EFCAB5A4FU69 1503 aa16.37■□□□□ 0.21
ZSWIM8-222ENST00000604754 IQGAP2Q13576 1575 aa16.36■□□□□ 0.21
ZSWIM8-222ENST00000604754 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
ZSWIM8-222ENST00000604754 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
ZSWIM8-222ENST00000604754 WDR62O43379 1518 aa16.35■□□□□ 0.21
ZSWIM8-222ENST00000604754 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
ZSWIM8-222ENST00000604754 ZNF326Q5BKZ1 582 aaKnown RBP16.34■□□□□ 0.21
ZSWIM8-222ENST00000604754 CTTNBP2Q8WZ74 1663 aa16.34■□□□□ 0.21
ZSWIM8-222ENST00000604754 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
ZSWIM8-222ENST00000604754 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
ZSWIM8-222ENST00000604754 PLB1Q6P1J6 1458 aa16.32■□□□□ 0.2
ZSWIM8-222ENST00000604754 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
ZSWIM8-222ENST00000604754 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
ZSWIM8-222ENST00000604754 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
ZSWIM8-222ENST00000604754 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
ZSWIM8-222ENST00000604754 PRG4Q92954 1404 aaPredicted RBP16.3■□□□□ 0.2
ZSWIM8-222ENST00000604754 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
ZSWIM8-222ENST00000604754 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
ZSWIM8-222ENST00000604754 EPRSP07814 1512 aaKnown RBP16.27■□□□□ 0.2
ZSWIM8-222ENST00000604754 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
ZSWIM8-222ENST00000604754 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.19
ZSWIM8-222ENST00000604754 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
ZSWIM8-222ENST00000604754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.196e-7■□□□□ 10.8
ZSWIM8-222ENST00000604754 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
ZSWIM8-222ENST00000604754 PTPRKQ15262 1439 aa16.26■□□□□ 0.19
ZSWIM8-222ENST00000604754 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
ZSWIM8-222ENST00000604754 PTPRGP23470 1445 aa16.24■□□□□ 0.19
ZSWIM8-222ENST00000604754 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
ZSWIM8-222ENST00000604754 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.19
ZSWIM8-222ENST00000604754 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
ZSWIM8-222ENST00000604754 CENPBP07199 599 aaPredicted RBP16.21■□□□□ 0.18
ZSWIM8-222ENST00000604754 TSPY4P0CV99 314 aa16.21■□□□□ 0.18
ZSWIM8-222ENST00000604754 TSPY10P0CW01 314 aa16.21■□□□□ 0.18
ZSWIM8-222ENST00000604754 MAGI3Q5TCQ9 1506 aa16.2■□□□□ 0.18
ZSWIM8-222ENST00000604754 DISP1Q96F81 1524 aa16.2■□□□□ 0.18
ZSWIM8-222ENST00000604754 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
ZSWIM8-222ENST00000604754 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
ZSWIM8-222ENST00000604754 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
ZSWIM8-222ENST00000604754 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
ZSWIM8-222ENST00000604754 MPHOSPH9Q99550 1183 aa16.17■□□□□ 0.18
ZSWIM8-222ENST00000604754 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
ZSWIM8-222ENST00000604754 NUP153P49790 1475 aaKnown RBP16.15■□□□□ 0.18
ZSWIM8-222ENST00000604754 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
ZSWIM8-222ENST00000604754 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
ZSWIM8-222ENST00000604754 CFAP43Q8NDM7 1665 aa16.13■□□□□ 0.17
ZSWIM8-222ENST00000604754 EHBP1L1Q8N3D4 1523 aa16.12■□□□□ 0.17
ZSWIM8-222ENST00000604754 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
ZSWIM8-222ENST00000604754 UGGT2Q9NYU1 1516 aa16.11■□□□□ 0.17
ZSWIM8-222ENST00000604754 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
ZSWIM8-222ENST00000604754 NAIPQ13075 1403 aa16.1■□□□□ 0.17
ZSWIM8-222ENST00000604754 PPP1R15AO75807 674 aaPredicted RBP16.1■□□□□ 0.17
ZSWIM8-222ENST00000604754 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.17
ZSWIM8-222ENST00000604754 RGL3Q3MIN7 710 aa16.08■□□□□ 0.17
ZSWIM8-222ENST00000604754 GTF3C3Q9Y5Q9 886 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms