RNA–Protein interactions for RNA: ENST00000604729.5

ZSWIM8-221, Transcript of zinc finger SWIM-type containing 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ZSWIM8, Length 6,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-221ENST00000604729 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
ZSWIM8-221ENST00000604729 RRP7BPQ9NSQ0 103 aa20.81■□□□□ 0.92
ZSWIM8-221ENST00000604729 NPHP1O15259 732 aa20.79■□□□□ 0.92
ZSWIM8-221ENST00000604729 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.923e-7■■■■□ 25.1
ZSWIM8-221ENST00000604729 ANP32CO43423 234 aa20.76■□□□□ 0.91
ZSWIM8-221ENST00000604729 HDGFP51858 240 aaKnown RBP20.74■□□□□ 0.91
ZSWIM8-221ENST00000604729 RGL3Q3MIN7 710 aa20.74■□□□□ 0.91
ZSWIM8-221ENST00000604729 CARMIL2Q6F5E8 1435 aa20.73■□□□□ 0.91
ZSWIM8-221ENST00000604729 TMC1Q8TDI8 760 aa20.73■□□□□ 0.91
ZSWIM8-221ENST00000604729 GGT6Q6P531 493 aa20.72■□□□□ 0.91
ZSWIM8-221ENST00000604729 CUX2O14529 1486 aa20.72■□□□□ 0.91
ZSWIM8-221ENST00000604729 CCDC9Q9Y3X0 531 aaKnown RBP20.72■□□□□ 0.91
ZSWIM8-221ENST00000604729 TONSLQ96HA7 1378 aa20.72■□□□□ 0.91
ZSWIM8-221ENST00000604729 POGKQ9P215 609 aa20.71■□□□□ 0.91
ZSWIM8-221ENST00000604729 SOGA1O94964 1423 aa20.69■□□□□ 0.9
ZSWIM8-221ENST00000604729 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
ZSWIM8-221ENST00000604729 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
ZSWIM8-221ENST00000604729 KANK1Q14678 1352 aa20.66■□□□□ 0.9
ZSWIM8-221ENST00000604729 CLIP1P30622 1438 aa20.64■□□□□ 0.89
ZSWIM8-221ENST00000604729 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
ZSWIM8-221ENST00000604729 ZNF316A6NFI3 1004 aaPredicted RBP20.6■□□□□ 0.89
ZSWIM8-221ENST00000604729 PPM1GO15355 546 aaPredicted RBP20.59■□□□□ 0.89
ZSWIM8-221ENST00000604729 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
ZSWIM8-221ENST00000604729 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.89
ZSWIM8-221ENST00000604729 MEX3CQ5U5Q3 659 aaKnown RBP20.58■□□□□ 0.88
ZSWIM8-221ENST00000604729 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
ZSWIM8-221ENST00000604729 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
ZSWIM8-221ENST00000604729 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
ZSWIM8-221ENST00000604729 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.87
ZSWIM8-221ENST00000604729 SOX12O15370 315 aa20.5■□□□□ 0.87
ZSWIM8-221ENST00000604729 WIZO95785 1651 aa20.48■□□□□ 0.87
ZSWIM8-221ENST00000604729 EID1Q9Y6B2 187 aa20.48■□□□□ 0.87
ZSWIM8-221ENST00000604729 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
ZSWIM8-221ENST00000604729 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
ZSWIM8-221ENST00000604729 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
ZSWIM8-221ENST00000604729 EEA1Q15075 1411 aa20.47■□□□□ 0.87
ZSWIM8-221ENST00000604729 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
ZSWIM8-221ENST00000604729 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
ZSWIM8-221ENST00000604729 SALL2Q9Y467 1007 aaPredicted RBP20.44■□□□□ 0.86
ZSWIM8-221ENST00000604729 SAFB2Q14151 953 aaKnown RBP eCLIP20.42■□□□□ 0.86
ZSWIM8-221ENST00000604729 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
ZSWIM8-221ENST00000604729 CSB-PGBD3P0DP91 1061 aa20.4■□□□□ 0.86
ZSWIM8-221ENST00000604729 STK26Q9P289 416 aa20.4■□□□□ 0.86
ZSWIM8-221ENST00000604729 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
ZSWIM8-221ENST00000604729 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
ZSWIM8-221ENST00000604729 JPH4Q96JJ6 628 aa20.36■□□□□ 0.85
ZSWIM8-221ENST00000604729 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
ZSWIM8-221ENST00000604729 SRPK2P78362 688 aaKnown RBP20.31■□□□□ 0.84
ZSWIM8-221ENST00000604729 KIF3BO15066 747 aa20.28■□□□□ 0.84
ZSWIM8-221ENST00000604729 WASHC2CQ9Y4E1 1318 aa20.27■□□□□ 0.84
ZSWIM8-221ENST00000604729 NUTM2DQ5VT03 806 aaPredicted RBP20.26■□□□□ 0.83
ZSWIM8-221ENST00000604729 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
ZSWIM8-221ENST00000604729 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
ZSWIM8-221ENST00000604729 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
ZSWIM8-221ENST00000604729 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
ZSWIM8-221ENST00000604729 DCAF8L1A6NGE4 600 aa20.24■□□□□ 0.83
ZSWIM8-221ENST00000604729 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
ZSWIM8-221ENST00000604729 FAM9BQ8IZU0 186 aa20.22■□□□□ 0.83
ZSWIM8-221ENST00000604729 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
ZSWIM8-221ENST00000604729 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
ZSWIM8-221ENST00000604729 SPAG9O60271 1321 aaKnown RBP20.21■□□□□ 0.83
ZSWIM8-221ENST00000604729 FHAD1B1AJZ9 1412 aa20.2■□□□□ 0.82
ZSWIM8-221ENST00000604729 PTPRGP23470 1445 aa20.2■□□□□ 0.82
ZSWIM8-221ENST00000604729 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
ZSWIM8-221ENST00000604729 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
ZSWIM8-221ENST00000604729 TMX4Q9H1E5 349 aaPredicted RBP20.17■□□□□ 0.82
ZSWIM8-221ENST00000604729 MSH5O43196 834 aa20.16■□□□□ 0.82
ZSWIM8-221ENST00000604729 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
ZSWIM8-221ENST00000604729 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
ZSWIM8-221ENST00000604729 KNSTRNQ9Y448 316 aa20.15■□□□□ 0.82
ZSWIM8-221ENST00000604729 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
ZSWIM8-221ENST00000604729 KLHL34Q8N239 644 aa20.14■□□□□ 0.82
ZSWIM8-221ENST00000604729 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
ZSWIM8-221ENST00000604729 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
ZSWIM8-221ENST00000604729 NUTM2FA1L443 756 aa20.13■□□□□ 0.81
ZSWIM8-221ENST00000604729 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
ZSWIM8-221ENST00000604729 EVA1CP58658 441 aa20.11■□□□□ 0.81
ZSWIM8-221ENST00000604729 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
ZSWIM8-221ENST00000604729 MAPK8IP3Q9UPT6 1336 aa20.1■□□□□ 0.81
ZSWIM8-221ENST00000604729 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
ZSWIM8-221ENST00000604729 NGDNQ8NEJ9 315 aaKnown RBP20.08■□□□□ 0.81
ZSWIM8-221ENST00000604729 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
ZSWIM8-221ENST00000604729 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
ZSWIM8-221ENST00000604729 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
ZSWIM8-221ENST00000604729 NUDCQ9Y266 331 aa20.06■□□□□ 0.8
ZSWIM8-221ENST00000604729 GTF3C3Q9Y5Q9 886 aa20.06■□□□□ 0.8
ZSWIM8-221ENST00000604729 HDGFL2Q7Z4V5 671 aaPredicted RBP20.04■□□□□ 0.8
ZSWIM8-221ENST00000604729 PIP4K2BP78356 416 aa20.04■□□□□ 0.8
ZSWIM8-221ENST00000604729 TULP1O00294 542 aaPredicted RBP20.03■□□□□ 0.8
ZSWIM8-221ENST00000604729 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.81e-10■■■■□ 22
ZSWIM8-221ENST00000604729 NEUROD2Q15784 382 aa20.01■□□□□ 0.79
ZSWIM8-221ENST00000604729 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
ZSWIM8-221ENST00000604729 G3V3G9 751 aa19.97■□□□□ 0.79
ZSWIM8-221ENST00000604729 ATF3P18847 181 aa19.97■□□□□ 0.79
ZSWIM8-221ENST00000604729 DCAF8Q5TAQ9 597 aa19.97■□□□□ 0.79
ZSWIM8-221ENST00000604729 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.97■□□□□ 0.79
ZSWIM8-221ENST00000604729 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
ZSWIM8-221ENST00000604729 GAPVD1Q14C86 1478 aa19.97■□□□□ 0.79
ZSWIM8-221ENST00000604729 ARHGAP35Q9NRY4 1499 aa19.96■□□□□ 0.79
ZSWIM8-221ENST00000604729 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms