RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 SMARCA2P51531 1590 aa13.09□□□□□ -0.31
UBE2E3-211ENST00000602837 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
UBE2E3-211ENST00000602837 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
UBE2E3-211ENST00000602837 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
UBE2E3-211ENST00000602837 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
UBE2E3-211ENST00000602837 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
UBE2E3-211ENST00000602837 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
UBE2E3-211ENST00000602837 CREBZFQ9NS37 354 aa13.04□□□□□ -0.32
UBE2E3-211ENST00000602837 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
UBE2E3-211ENST00000602837 WIZO95785 1651 aa13.03□□□□□ -0.32
UBE2E3-211ENST00000602837 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
UBE2E3-211ENST00000602837 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
UBE2E3-211ENST00000602837 RGL2O15211 777 aa12.99□□□□□ -0.33
UBE2E3-211ENST00000602837 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
UBE2E3-211ENST00000602837 NUBP1P53384 320 aa12.96□□□□□ -0.33
UBE2E3-211ENST00000602837 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
UBE2E3-211ENST00000602837 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
UBE2E3-211ENST00000602837 NPM1P06748 294 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBE2E3-211ENST00000602837 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
UBE2E3-211ENST00000602837 GSE1Q14687 1217 aa12.86□□□□□ -0.35
UBE2E3-211ENST00000602837 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
UBE2E3-211ENST00000602837 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
UBE2E3-211ENST00000602837 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
UBE2E3-211ENST00000602837 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
UBE2E3-211ENST00000602837 NESP48681 1621 aa12.8□□□□□ -0.36
UBE2E3-211ENST00000602837 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
UBE2E3-211ENST00000602837 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
UBE2E3-211ENST00000602837 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.37
UBE2E3-211ENST00000602837 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
UBE2E3-211ENST00000602837 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
UBE2E3-211ENST00000602837 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
UBE2E3-211ENST00000602837 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
UBE2E3-211ENST00000602837 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
UBE2E3-211ENST00000602837 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
UBE2E3-211ENST00000602837 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
UBE2E3-211ENST00000602837 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
UBE2E3-211ENST00000602837 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
UBE2E3-211ENST00000602837 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
UBE2E3-211ENST00000602837 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
UBE2E3-211ENST00000602837 PYGBP11216 843 aa12.68□□□□□ -0.38
UBE2E3-211ENST00000602837 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
UBE2E3-211ENST00000602837 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
UBE2E3-211ENST00000602837 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
UBE2E3-211ENST00000602837 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
UBE2E3-211ENST00000602837 CFTRP13569 1480 aa12.65□□□□□ -0.38
UBE2E3-211ENST00000602837 CHRM1P11229 460 aaPredicted RBP12.65□□□□□ -0.38
UBE2E3-211ENST00000602837 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
UBE2E3-211ENST00000602837 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
UBE2E3-211ENST00000602837 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
UBE2E3-211ENST00000602837 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
UBE2E3-211ENST00000602837 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
UBE2E3-211ENST00000602837 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
UBE2E3-211ENST00000602837 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
UBE2E3-211ENST00000602837 CEP164Q9UPV0 1460 aa12.56□□□□□ -0.4
UBE2E3-211ENST00000602837 STK25O00506 426 aa12.54□□□□□ -0.4
UBE2E3-211ENST00000602837 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
UBE2E3-211ENST00000602837 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
UBE2E3-211ENST00000602837 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
UBE2E3-211ENST00000602837 PRDM2Q13029 1718 aa12.52□□□□□ -0.41
UBE2E3-211ENST00000602837 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.52□□□□□ -0.41
UBE2E3-211ENST00000602837 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
UBE2E3-211ENST00000602837 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.41
UBE2E3-211ENST00000602837 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
UBE2E3-211ENST00000602837 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
UBE2E3-211ENST00000602837 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
UBE2E3-211ENST00000602837 CUX2O14529 1486 aa12.5□□□□□ -0.41
UBE2E3-211ENST00000602837 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
UBE2E3-211ENST00000602837 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
UBE2E3-211ENST00000602837 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
UBE2E3-211ENST00000602837 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
UBE2E3-211ENST00000602837 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
UBE2E3-211ENST00000602837 PCDHB8Q9UN66 801 aa12.47□□□□□ -0.41
UBE2E3-211ENST00000602837 PCDHB13Q9Y5F0 798 aa12.47□□□□□ -0.41
UBE2E3-211ENST00000602837 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
UBE2E3-211ENST00000602837 WDR62O43379 1518 aa12.44□□□□□ -0.42
UBE2E3-211ENST00000602837 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
UBE2E3-211ENST00000602837 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
UBE2E3-211ENST00000602837 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
UBE2E3-211ENST00000602837 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
UBE2E3-211ENST00000602837 PDAP1Q13442 181 aaKnown RBP12.38□□□□□ -0.43
UBE2E3-211ENST00000602837 MAP3K13O43283 966 aa12.37□□□□□ -0.43
UBE2E3-211ENST00000602837 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
UBE2E3-211ENST00000602837 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
UBE2E3-211ENST00000602837 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
UBE2E3-211ENST00000602837 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
UBE2E3-211ENST00000602837 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
UBE2E3-211ENST00000602837 IFNL1Q8IU54 200 aa12.36□□□□□ -0.43
UBE2E3-211ENST00000602837 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
UBE2E3-211ENST00000602837 CUX1P39880 1505 aa12.34□□□□□ -0.43
UBE2E3-211ENST00000602837 PSEN1P49768 467 aa12.33□□□□□ -0.44
UBE2E3-211ENST00000602837 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
UBE2E3-211ENST00000602837 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
UBE2E3-211ENST00000602837 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
UBE2E3-211ENST00000602837 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
UBE2E3-211ENST00000602837 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
UBE2E3-211ENST00000602837 SOGA1O94964 1423 aa12.28□□□□□ -0.44
UBE2E3-211ENST00000602837 IFT140Q96RY7 1462 aa12.28□□□□□ -0.44
UBE2E3-211ENST00000602837 ZNF608Q9ULD9 1512 aaPredicted RBP12.26□□□□□ -0.45
UBE2E3-211ENST00000602837 SYNJ1O43426 1573 aa12.25□□□□□ -0.45
UBE2E3-211ENST00000602837 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms