RNA–Protein interactions for RNA: ENST00000602725.5

PTP4A2-218, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A2, Length 3,353 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-218ENST00000602725 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
PTP4A2-218ENST00000602725 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
PTP4A2-218ENST00000602725 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
PTP4A2-218ENST00000602725 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
PTP4A2-218ENST00000602725 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
PTP4A2-218ENST00000602725 DEKP35659 375 aaKnown RBP11.72□□□□□ -0.53
PTP4A2-218ENST00000602725 SIN3AQ96ST3 1273 aa11.72□□□□□ -0.53
PTP4A2-218ENST00000602725 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
PTP4A2-218ENST00000602725 ARHGAP35Q9NRY4 1499 aa11.69□□□□□ -0.54
PTP4A2-218ENST00000602725 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
PTP4A2-218ENST00000602725 MAP3K1Q13233 1512 aa11.68□□□□□ -0.54
PTP4A2-218ENST00000602725 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
PTP4A2-218ENST00000602725 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
PTP4A2-218ENST00000602725 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTP4A2-218ENST00000602725 TIAM1Q13009 1591 aa11.66□□□□□ -0.54
PTP4A2-218ENST00000602725 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
PTP4A2-218ENST00000602725 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
PTP4A2-218ENST00000602725 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
PTP4A2-218ENST00000602725 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
PTP4A2-218ENST00000602725 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
PTP4A2-218ENST00000602725 TONSLQ96HA7 1378 aa11.6□□□□□ -0.55
PTP4A2-218ENST00000602725 FAM50AQ14320 339 aaKnown RBP11.59□□□□□ -0.55
PTP4A2-218ENST00000602725 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.56
PTP4A2-218ENST00000602725 NBR1Q14596 966 aa11.56□□□□□ -0.56
PTP4A2-218ENST00000602725 FHAD1B1AJZ9 1412 aa11.56□□□□□ -0.56
PTP4A2-218ENST00000602725 B4GALNT3Q6L9W6 998 aa11.55□□□□□ -0.56
PTP4A2-218ENST00000602725 CFAP43Q8NDM7 1665 aa11.55□□□□□ -0.56
PTP4A2-218ENST00000602725 CUX1P39880 1505 aa11.54□□□□□ -0.56
PTP4A2-218ENST00000602725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTP4A2-218ENST00000602725 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTP4A2-218ENST00000602725 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
PTP4A2-218ENST00000602725 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
PTP4A2-218ENST00000602725 RTL5Q5HYW3 569 aaPredicted RBP11.51□□□□□ -0.57
PTP4A2-218ENST00000602725 ZBED9Q6R2W3 1325 aa11.5□□□□□ -0.57
PTP4A2-218ENST00000602725 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
PTP4A2-218ENST00000602725 ANP32AP39687 249 aaKnown RBP11.49□□□□□ -0.57
PTP4A2-218ENST00000602725 IPO9Q96P70 1041 aaKnown RBP11.49□□□□□ -0.57
PTP4A2-218ENST00000602725 WASHC2AQ641Q2 1341 aa11.49□□□□□ -0.57
PTP4A2-218ENST00000602725 CCDC18Q5T9S5 1454 aa11.48□□□□□ -0.57
PTP4A2-218ENST00000602725 NCOA2Q15596 1464 aa11.48□□□□□ -0.57
PTP4A2-218ENST00000602725 CNTLNQ9NXG0 1405 aa11.47□□□□□ -0.57
PTP4A2-218ENST00000602725 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
PTP4A2-218ENST00000602725 PCF11O94913 1555 aaKnown RBP11.47□□□□□ -0.57
PTP4A2-218ENST00000602725 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.58
PTP4A2-218ENST00000602725 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
PTP4A2-218ENST00000602725 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
PTP4A2-218ENST00000602725 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
PTP4A2-218ENST00000602725 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
PTP4A2-218ENST00000602725 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
PTP4A2-218ENST00000602725 IGF1RP08069 1367 aa11.44□□□□□ -0.58
PTP4A2-218ENST00000602725 PTPN23Q9H3S7 1636 aa11.44□□□□□ -0.58
PTP4A2-218ENST00000602725 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
PTP4A2-218ENST00000602725 MRS2Q9HD23 443 aa11.43□□□□□ -0.58
PTP4A2-218ENST00000602725 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.582e-54■■■■■ 66.5
PTP4A2-218ENST00000602725 FGD6Q6ZV73 1430 aa11.42□□□□□ -0.58
PTP4A2-218ENST00000602725 NCAPD3P42695 1498 aa11.42□□□□□ -0.58
PTP4A2-218ENST00000602725 FYCO1Q9BQS8 1478 aa11.42□□□□□ -0.58
PTP4A2-218ENST00000602725 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
PTP4A2-218ENST00000602725 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
PTP4A2-218ENST00000602725 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
PTP4A2-218ENST00000602725 CCDC136Q96JN2 1154 aa11.4□□□□□ -0.58
PTP4A2-218ENST00000602725 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
PTP4A2-218ENST00000602725 NAIPQ13075 1403 aa11.38□□□□□ -0.59
PTP4A2-218ENST00000602725 RNF123Q5XPI4 1314 aa11.38□□□□□ -0.59
PTP4A2-218ENST00000602725 NCOA1Q15788 1441 aa11.38□□□□□ -0.59
PTP4A2-218ENST00000602725 CASKIN1Q8WXD9 1431 aa11.38□□□□□ -0.59
PTP4A2-218ENST00000602725 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.596e-8■■■■□ 23.2
PTP4A2-218ENST00000602725 CCDC7Q96M83 1385 aa11.38□□□□□ -0.59
PTP4A2-218ENST00000602725 PTPRKQ15262 1439 aa11.38□□□□□ -0.59
PTP4A2-218ENST00000602725 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
PTP4A2-218ENST00000602725 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
PTP4A2-218ENST00000602725 AKNAQ7Z591 1439 aa11.37□□□□□ -0.59
PTP4A2-218ENST00000602725 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
PTP4A2-218ENST00000602725 CFTRP13569 1480 aa11.36□□□□□ -0.59
PTP4A2-218ENST00000602725 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
PTP4A2-218ENST00000602725 P3H3Q8IVL6 736 aa11.36□□□□□ -0.59
PTP4A2-218ENST00000602725 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
PTP4A2-218ENST00000602725 HMGXB3Q12766 1538 aa11.35□□□□□ -0.59
PTP4A2-218ENST00000602725 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
PTP4A2-218ENST00000602725 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
PTP4A2-218ENST00000602725 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
PTP4A2-218ENST00000602725 HECW1Q76N89 1606 aa11.33□□□□□ -0.6
PTP4A2-218ENST00000602725 ABCA5Q8WWZ7 1642 aa11.33□□□□□ -0.6
PTP4A2-218ENST00000602725 POLR1AO95602 1720 aaPredicted RBP11.32□□□□□ -0.6
PTP4A2-218ENST00000602725 WASHC2CQ9Y4E1 1318 aa11.32□□□□□ -0.6
PTP4A2-218ENST00000602725 NEFMP07197 916 aa11.31□□□□□ -0.6
PTP4A2-218ENST00000602725 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
PTP4A2-218ENST00000602725 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
PTP4A2-218ENST00000602725 MYOM3Q5VTT5 1437 aa11.3□□□□□ -0.6
PTP4A2-218ENST00000602725 PPM1GO15355 546 aaPredicted RBP11.3□□□□□ -0.6
PTP4A2-218ENST00000602725 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
PTP4A2-218ENST00000602725 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
PTP4A2-218ENST00000602725 DENND4BO75064 1496 aaPredicted RBP11.29□□□□□ -0.6
PTP4A2-218ENST00000602725 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
PTP4A2-218ENST00000602725 L3MBTL2Q969R5 705 aa11.28□□□□□ -0.6
PTP4A2-218ENST00000602725 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
PTP4A2-218ENST00000602725 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
PTP4A2-218ENST00000602725 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
PTP4A2-218ENST00000602725 NPM2Q86SE8 214 aaKnown RBP11.27□□□□□ -0.6
PTP4A2-218ENST00000602725 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms