RNA–Protein interactions for RNA: ENST00000602591.1

HCG18-246, Transcript of HLA complex group 18, humanhuman

Gene HCG18, Length 1,976 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-246ENST00000602591 CHD1O14646 1710 aa19.08■□□□□ 0.65
HCG18-246ENST00000602591 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
HCG18-246ENST00000602591 CTTNBP2Q8WZ74 1663 aa19.07■□□□□ 0.64
HCG18-246ENST00000602591 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
HCG18-246ENST00000602591 CLIP1P30622 1438 aa19■□□□□ 0.63
HCG18-246ENST00000602591 NUP160Q12769 1436 aa18.99■□□□□ 0.63
HCG18-246ENST00000602591 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
HCG18-246ENST00000602591 IQGAP2Q13576 1575 aa18.95■□□□□ 0.62
HCG18-246ENST00000602591 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
HCG18-246ENST00000602591 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
HCG18-246ENST00000602591 P3H3Q8IVL6 736 aa18.9■□□□□ 0.62
HCG18-246ENST00000602591 SAMD9Q5K651 1589 aa18.87■□□□□ 0.61
HCG18-246ENST00000602591 FHOD3Q2V2M9 1422 aa18.85■□□□□ 0.61
HCG18-246ENST00000602591 UGGT2Q9NYU1 1516 aa18.85■□□□□ 0.61
HCG18-246ENST00000602591 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
HCG18-246ENST00000602591 DISP1Q96F81 1524 aa18.84■□□□□ 0.61
HCG18-246ENST00000602591 EFCAB5A4FU69 1503 aa18.82■□□□□ 0.6
HCG18-246ENST00000602591 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
HCG18-246ENST00000602591 ERCC6L2Q5T890 1561 aa18.79■□□□□ 0.6
HCG18-246ENST00000602591 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
HCG18-246ENST00000602591 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
HCG18-246ENST00000602591 VPS8Q8N3P4 1428 aa18.78■□□□□ 0.6
HCG18-246ENST00000602591 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
HCG18-246ENST00000602591 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
HCG18-246ENST00000602591 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
HCG18-246ENST00000602591 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
HCG18-246ENST00000602591 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
HCG18-246ENST00000602591 LRRIQ1Q96JM4 1722 aa18.64■□□□□ 0.57
HCG18-246ENST00000602591 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.57
HCG18-246ENST00000602591 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
HCG18-246ENST00000602591 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
HCG18-246ENST00000602591 PLB1Q6P1J6 1458 aa18.6■□□□□ 0.57
HCG18-246ENST00000602591 ATP1B4Q9UN42 357 aaPredicted RBP18.59■□□□□ 0.57
HCG18-246ENST00000602591 FYCO1Q9BQS8 1478 aa18.58■□□□□ 0.57
HCG18-246ENST00000602591 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
HCG18-246ENST00000602591 KANK4Q5T7N3 995 aaPredicted RBP18.56■□□□□ 0.56
HCG18-246ENST00000602591 PTPRGP23470 1445 aa18.55■□□□□ 0.56
HCG18-246ENST00000602591 RAPGEF6Q8TEU7 1601 aa18.54■□□□□ 0.56
HCG18-246ENST00000602591 NUP153P49790 1475 aaKnown RBP18.54■□□□□ 0.56
HCG18-246ENST00000602591 ABCA8O94911 1581 aa18.54■□□□□ 0.56
HCG18-246ENST00000602591 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
HCG18-246ENST00000602591 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
HCG18-246ENST00000602591 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
HCG18-246ENST00000602591 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
HCG18-246ENST00000602591 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
HCG18-246ENST00000602591 EPRSP07814 1512 aaKnown RBP18.49■□□□□ 0.55
HCG18-246ENST00000602591 MAGI3Q5TCQ9 1506 aa18.48■□□□□ 0.55
HCG18-246ENST00000602591 APLP2Q06481 763 aa18.45■□□□□ 0.54
HCG18-246ENST00000602591 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
HCG18-246ENST00000602591 UACAQ9BZF9 1416 aa18.44■□□□□ 0.54
HCG18-246ENST00000602591 RIMBP3CA6NJZ7 1639 aa18.44■□□□□ 0.54
HCG18-246ENST00000602591 RIMBP3BA6NNM3 1639 aa18.44■□□□□ 0.54
HCG18-246ENST00000602591 RIMBP3Q9UFD9 1639 aa18.44■□□□□ 0.54
HCG18-246ENST00000602591 LRRC9Q6ZRR7 1453 aa18.44■□□□□ 0.54
HCG18-246ENST00000602591 ABCC2Q92887 1545 aa18.42■□□□□ 0.54
HCG18-246ENST00000602591 ATP10BO94823 1461 aa18.42■□□□□ 0.54
HCG18-246ENST00000602591 ADCY10Q96PN6 1610 aa18.41■□□□□ 0.54
HCG18-246ENST00000602591 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
HCG18-246ENST00000602591 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
HCG18-246ENST00000602591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
HCG18-246ENST00000602591 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
HCG18-246ENST00000602591 ZCCHC11Q5TAX3 1644 aaKnown RBP18.33■□□□□ 0.53
HCG18-246ENST00000602591 MTUS2Q5JR59 1369 aa18.33■□□□□ 0.52
HCG18-246ENST00000602591 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
HCG18-246ENST00000602591 KDM5BQ9UGL1 1544 aa18.31■□□□□ 0.52
HCG18-246ENST00000602591 EHBP1L1Q8N3D4 1523 aa18.31■□□□□ 0.52
HCG18-246ENST00000602591 PHLDB1Q86UU1 1377 aa18.31■□□□□ 0.52
HCG18-246ENST00000602591 KIF14Q15058 1648 aa18.29■□□□□ 0.52
HCG18-246ENST00000602591 NCOA2Q15596 1464 aa18.28■□□□□ 0.52
HCG18-246ENST00000602591 TROQ12816 1431 aaPredicted RBP18.26■□□□□ 0.51
HCG18-246ENST00000602591 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
HCG18-246ENST00000602591 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
HCG18-246ENST00000602591 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
HCG18-246ENST00000602591 SUPT6HQ7KZ85 1726 aaKnown RBP18.25■□□□□ 0.51
HCG18-246ENST00000602591 PLEKHD1A6NEE1 506 aa18.21■□□□□ 0.51
HCG18-246ENST00000602591 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.5
HCG18-246ENST00000602591 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
HCG18-246ENST00000602591 MYT1Q01538 1121 aa18.18■□□□□ 0.5
HCG18-246ENST00000602591 ABCC10Q5T3U5 1492 aa18.18■□□□□ 0.5
HCG18-246ENST00000602591 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
HCG18-246ENST00000602591 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
HCG18-246ENST00000602591 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
HCG18-246ENST00000602591 TTC37Q6PGP7 1564 aa18.16■□□□□ 0.5
HCG18-246ENST00000602591 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
HCG18-246ENST00000602591 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.49
HCG18-246ENST00000602591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.14■□□□□ 0.49
HCG18-246ENST00000602591 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
HCG18-246ENST00000602591 CDC42BPAQ5VT25 1732 aa18.13■□□□□ 0.49
HCG18-246ENST00000602591 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
HCG18-246ENST00000602591 GPATCH8Q9UKJ3 1502 aaKnown RBP18.12■□□□□ 0.49
HCG18-246ENST00000602591 ZNF644Q9H582 1327 aaPredicted RBP18.1■□□□□ 0.49
HCG18-246ENST00000602591 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
HCG18-246ENST00000602591 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.48
HCG18-246ENST00000602591 CDC42BPBQ9Y5S2 1711 aa18.07■□□□□ 0.48
HCG18-246ENST00000602591 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
HCG18-246ENST00000602591 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
HCG18-246ENST00000602591 ITSN2Q9NZM3 1697 aa18.04■□□□□ 0.48
HCG18-246ENST00000602591 PREX2Q70Z35 1606 aa18.04■□□□□ 0.48
HCG18-246ENST00000602591 ITGAEP38570 1179 aa18.04■□□□□ 0.48
HCG18-246ENST00000602591 TCOF1Q13428 1488 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms