RNA–Protein interactions for RNA: ENST00000600740.5

SMIM7-219, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-219ENST00000600740 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
SMIM7-219ENST00000600740 NUP160Q12769 1436 aa15.41■□□□□ 0.06
SMIM7-219ENST00000600740 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMIM7-219ENST00000600740 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
SMIM7-219ENST00000600740 DISP3Q9P2K9 1392 aa15.35■□□□□ 0.05
SMIM7-219ENST00000600740 ADCY10Q96PN6 1610 aa15.34■□□□□ 0.05
SMIM7-219ENST00000600740 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
SMIM7-219ENST00000600740 CUX1P39880 1505 aa15.33■□□□□ 0.05
SMIM7-219ENST00000600740 PPRC1Q5VV67 1664 aaKnown RBP15.31■□□□□ 0.04
SMIM7-219ENST00000600740 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
SMIM7-219ENST00000600740 COL17A1Q9UMD9 1497 aaPredicted RBP15.27■□□□□ 0.04
SMIM7-219ENST00000600740 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
SMIM7-219ENST00000600740 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
SMIM7-219ENST00000600740 JPH4Q96JJ6 628 aa15.22■□□□□ 0.03
SMIM7-219ENST00000600740 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
SMIM7-219ENST00000600740 GLI2P10070 1586 aa15.16■□□□□ 0.02
SMIM7-219ENST00000600740 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
SMIM7-219ENST00000600740 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
SMIM7-219ENST00000600740 CERKQ8TCT0 537 aa15.08■□□□□ 0
SMIM7-219ENST00000600740 ASXL2Q76L83 1435 aa15.08■□□□□ 0
SMIM7-219ENST00000600740 MAP3K4Q9Y6R4 1608 aa15.07■□□□□ 0
SMIM7-219ENST00000600740 PLB1Q6P1J6 1458 aa15.05■□□□□ -0
SMIM7-219ENST00000600740 PCF11O94913 1555 aaKnown RBP15.05■□□□□ -0
SMIM7-219ENST00000600740 KIF21BO75037 1637 aa15.04■□□□□ -0
SMIM7-219ENST00000600740 TEX14Q8IWB6 1497 aa15.04■□□□□ -0
SMIM7-219ENST00000600740 PTPRMP28827 1452 aa15.03■□□□□ -0
SMIM7-219ENST00000600740 ERICH3Q5RHP9 1530 aa15.02■□□□□ -0
SMIM7-219ENST00000600740 ABCC2Q92887 1545 aa15.02□□□□□ -0.01
SMIM7-219ENST00000600740 CUL7Q14999 1698 aa15□□□□□ -0.01
SMIM7-219ENST00000600740 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
SMIM7-219ENST00000600740 ADAMTSL3P82987 1691 aa14.98□□□□□ -0.01
SMIM7-219ENST00000600740 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
SMIM7-219ENST00000600740 PTPRGP23470 1445 aa14.94□□□□□ -0.02
SMIM7-219ENST00000600740 KIAA0586Q9BVV6 1533 aa14.92□□□□□ -0.02
SMIM7-219ENST00000600740 HSPA2P54652 639 aa14.9□□□□□ -0.02
SMIM7-219ENST00000600740 TTBK1Q5TCY1 1321 aaPredicted RBP14.9□□□□□ -0.02
SMIM7-219ENST00000600740 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
SMIM7-219ENST00000600740 MADDQ8WXG6 1647 aa14.85□□□□□ -0.03
SMIM7-219ENST00000600740 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
SMIM7-219ENST00000600740 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
SMIM7-219ENST00000600740 TNIKQ9UKE5 1360 aa14.82□□□□□ -0.04
SMIM7-219ENST00000600740 ZCCHC11Q5TAX3 1644 aaKnown RBP14.81□□□□□ -0.04
SMIM7-219ENST00000600740 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
SMIM7-219ENST00000600740 MAGI3Q5TCQ9 1506 aa14.81□□□□□ -0.04
SMIM7-219ENST00000600740 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
SMIM7-219ENST00000600740 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
SMIM7-219ENST00000600740 RIMS1Q86UR5 1692 aaKnown RBP14.77□□□□□ -0.04
SMIM7-219ENST00000600740 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
SMIM7-219ENST00000600740 CD109Q6YHK3 1445 aa14.76□□□□□ -0.05
SMIM7-219ENST00000600740 WDR7Q9Y4E6 1490 aa14.75□□□□□ -0.05
SMIM7-219ENST00000600740 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
SMIM7-219ENST00000600740 ARAP3Q8WWN8 1544 aa14.74□□□□□ -0.05
SMIM7-219ENST00000600740 ARID4BQ4LE39 1312 aaPredicted RBP14.67□□□□□ -0.06
SMIM7-219ENST00000600740 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
SMIM7-219ENST00000600740 STRCQ7RTU9 1775 aa14.67□□□□□ -0.06
SMIM7-219ENST00000600740 KCNH8Q96L42 1107 aa14.64□□□□□ -0.07
SMIM7-219ENST00000600740 DISP1Q96F81 1524 aa14.64□□□□□ -0.07
SMIM7-219ENST00000600740 YEATS2Q9ULM3 1422 aa14.62□□□□□ -0.07
SMIM7-219ENST00000600740 RAPGEF3O95398 923 aa14.61□□□□□ -0.07
SMIM7-219ENST00000600740 IQGAP2Q13576 1575 aa14.6□□□□□ -0.07
SMIM7-219ENST00000600740 LTBP4Q8N2S1 1624 aa14.6□□□□□ -0.07
SMIM7-219ENST00000600740 DMRT2Q9Y5R5 561 aa14.6□□□□□ -0.07
SMIM7-219ENST00000600740 IGF1RP08069 1367 aa14.6□□□□□ -0.07
SMIM7-219ENST00000600740 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
SMIM7-219ENST00000600740 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.07
SMIM7-219ENST00000600740 FRMPD1Q5SYB0 1578 aa14.58□□□□□ -0.08
SMIM7-219ENST00000600740 MED1Q15648 1581 aaPredicted RBP14.57□□□□□ -0.08
SMIM7-219ENST00000600740 PHLDB1Q86UU1 1377 aa14.54□□□□□ -0.08
SMIM7-219ENST00000600740 ARHGEF40Q8TER5 1519 aa14.54□□□□□ -0.08
SMIM7-219ENST00000600740 FER1L4A9Z1Z3 1794 aa14.52□□□□□ -0.08
SMIM7-219ENST00000600740 SIGLEC1Q9BZZ2 1709 aa14.52□□□□□ -0.08
SMIM7-219ENST00000600740 TTC37Q6PGP7 1564 aa14.52□□□□□ -0.08
SMIM7-219ENST00000600740 PTPRTO14522 1441 aa14.51□□□□□ -0.09
SMIM7-219ENST00000600740 KIAA0556O60303 1618 aa14.5□□□□□ -0.09
SMIM7-219ENST00000600740 UGGT2Q9NYU1 1516 aa14.48□□□□□ -0.09
SMIM7-219ENST00000600740 POGZQ7Z3K3 1410 aa14.48□□□□□ -0.09
SMIM7-219ENST00000600740 FANCAO15360 1455 aa14.47□□□□□ -0.09
SMIM7-219ENST00000600740 NEO1Q92859 1461 aa14.47□□□□□ -0.09
SMIM7-219ENST00000600740 ABCA9Q8IUA7 1624 aa14.47□□□□□ -0.09
SMIM7-219ENST00000600740 UBAP1LF5GYI3 381 aa14.46□□□□□ -0.09
SMIM7-219ENST00000600740 CARMIL1Q5VZK9 1371 aa14.45□□□□□ -0.1
SMIM7-219ENST00000600740 ABCA8O94911 1581 aa14.44□□□□□ -0.1
SMIM7-219ENST00000600740 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
SMIM7-219ENST00000600740 RICTORQ6R327 1708 aa14.44□□□□□ -0.1
SMIM7-219ENST00000600740 MLECQ14165 292 aa14.43□□□□□ -0.1
SMIM7-219ENST00000600740 CEBPAP49715 358 aaPredicted RBP14.41□□□□□ -0.1
SMIM7-219ENST00000600740 UHRF1BP1Q6BDS2 1440 aa14.41□□□□□ -0.1
SMIM7-219ENST00000600740 AKNAQ7Z591 1439 aa14.4□□□□□ -0.1
SMIM7-219ENST00000600740 SETD1BQ9UPS6 1966 aaKnown RBP14.4□□□□□ -0.1
SMIM7-219ENST00000600740 HSPA1LP34931 641 aa14.39□□□□□ -0.11
SMIM7-219ENST00000600740 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
SMIM7-219ENST00000600740 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
SMIM7-219ENST00000600740 DENND4BO75064 1496 aaPredicted RBP14.36□□□□□ -0.11
SMIM7-219ENST00000600740 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
SMIM7-219ENST00000600740 FHOD3Q2V2M9 1422 aa14.35□□□□□ -0.11
SMIM7-219ENST00000600740 ZMYM4Q5VZL5 1548 aa14.35□□□□□ -0.11
SMIM7-219ENST00000600740 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
SMIM7-219ENST00000600740 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
SMIM7-219ENST00000600740 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
SMIM7-219ENST00000600740 ZNF335Q9H4Z2 1342 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 273.1 ms