RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 KIAA0586Q9BVV6 1533 aa26.77■■□□□ 1.88
RPS28-203ENST00000600659 RAPGEF2Q9Y4G8 1499 aa26.75■■□□□ 1.87
RPS28-203ENST00000600659 PRXQ9BXM0 1461 aa26.71■■□□□ 1.87
RPS28-203ENST00000600659 PRG4Q92954 1404 aaPredicted RBP26.71■■□□□ 1.87
RPS28-203ENST00000600659 JPH4Q96JJ6 628 aa26.69■■□□□ 1.86
RPS28-203ENST00000600659 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
RPS28-203ENST00000600659 IQGAP2Q13576 1575 aa26.66■■□□□ 1.86
RPS28-203ENST00000600659 CTTNBP2Q8WZ74 1663 aa26.6■■□□□ 1.85
RPS28-203ENST00000600659 EEA1Q15075 1411 aa26.6■■□□□ 1.85
RPS28-203ENST00000600659 CSRNP3Q8WYN3 585 aa26.53■■□□□ 1.84
RPS28-203ENST00000600659 UGGT2Q9NYU1 1516 aa26.52■■□□□ 1.84
RPS28-203ENST00000600659 DISP1Q96F81 1524 aa26.51■■□□□ 1.83
RPS28-203ENST00000600659 KIAA0556O60303 1618 aa26.44■■□□□ 1.82
RPS28-203ENST00000600659 KIF21BO75037 1637 aa26.43■■□□□ 1.82
RPS28-203ENST00000600659 ADCY10Q96PN6 1610 aa26.42■■□□□ 1.82
RPS28-203ENST00000600659 CARMIL2Q6F5E8 1435 aa26.41■■□□□ 1.82
RPS28-203ENST00000600659 FAM9AQ8IZU1 332 aaPredicted RBP26.39■■□□□ 1.81
RPS28-203ENST00000600659 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
RPS28-203ENST00000600659 PTPRGP23470 1445 aa26.34■■□□□ 1.81
RPS28-203ENST00000600659 SAMD9Q5K651 1589 aa26.27■■□□□ 1.8
RPS28-203ENST00000600659 GOLGA3Q08378 1498 aa26.26■■□□□ 1.79
RPS28-203ENST00000600659 MAPKBP1O60336 1514 aa26.23■■□□□ 1.79
RPS28-203ENST00000600659 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
RPS28-203ENST00000600659 KIF13AQ9H1H9 1805 aa26.21■■□□□ 1.79
RPS28-203ENST00000600659 ABCC2Q92887 1545 aa26.21■■□□□ 1.79
RPS28-203ENST00000600659 UACAQ9BZF9 1416 aa26.2■■□□□ 1.78
RPS28-203ENST00000600659 TTBK1Q5TCY1 1321 aaPredicted RBP26.19■■□□□ 1.78
RPS28-203ENST00000600659 TRHP20396 242 aaPredicted RBP26.18■■□□□ 1.78
RPS28-203ENST00000600659 ABCA8O94911 1581 aa26.16■■□□□ 1.78
RPS28-203ENST00000600659 PLB1Q6P1J6 1458 aa26.14■■□□□ 1.78
RPS28-203ENST00000600659 KDM5BQ9UGL1 1544 aa26.12■■□□□ 1.77
RPS28-203ENST00000600659 DIP2BQ9P265 1576 aa26.11■■□□□ 1.77
RPS28-203ENST00000600659 ZCCHC11Q5TAX3 1644 aaKnown RBP26.1■■□□□ 1.77
RPS28-203ENST00000600659 ABCC10Q5T3U5 1492 aa26.08■■□□□ 1.77
RPS28-203ENST00000600659 EFCAB5A4FU69 1503 aa26.07■■□□□ 1.76
RPS28-203ENST00000600659 NPM1P06748 294 aaKnown RBP eCLIP26.05■■□□□ 1.76
RPS28-203ENST00000600659 P3H3Q8IVL6 736 aa26.04■■□□□ 1.76
RPS28-203ENST00000600659 EHMT2Q96KQ7 1210 aa26.03■■□□□ 1.76
RPS28-203ENST00000600659 FHOD3Q2V2M9 1422 aa26.03■■□□□ 1.76
RPS28-203ENST00000600659 ASXL2Q76L83 1435 aa26■■□□□ 1.75
RPS28-203ENST00000600659 UBTFP17480 764 aaKnown RBP25.98■■□□□ 1.75
RPS28-203ENST00000600659 RAPGEF6Q8TEU7 1601 aa25.98■■□□□ 1.75
RPS28-203ENST00000600659 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
RPS28-203ENST00000600659 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.75
RPS28-203ENST00000600659 GLI2P10070 1586 aa25.92■■□□□ 1.74
RPS28-203ENST00000600659 FAM69CQ0P6D2 419 aa25.9■■□□□ 1.74
RPS28-203ENST00000600659 EPRSP07814 1512 aaKnown RBP25.89■■□□□ 1.73
RPS28-203ENST00000600659 ATP10BO94823 1461 aa25.89■■□□□ 1.73
RPS28-203ENST00000600659 NUP153P49790 1475 aaKnown RBP25.89■■□□□ 1.73
RPS28-203ENST00000600659 WDR7Q9Y4E6 1490 aa25.88■■□□□ 1.73
RPS28-203ENST00000600659 PPRC1Q5VV67 1664 aaKnown RBP25.87■■□□□ 1.73
RPS28-203ENST00000600659 TSPOAP1O95153 1857 aa25.87■■□□□ 1.73
RPS28-203ENST00000600659 MAP3K4Q9Y6R4 1608 aa25.84■■□□□ 1.73
RPS28-203ENST00000600659 ARID3CA6NKF2 412 aa25.77■■□□□ 1.72
RPS28-203ENST00000600659 FMN1Q68DA7 1419 aa25.74■■□□□ 1.71
RPS28-203ENST00000600659 LRRIQ1Q96JM4 1722 aa25.73■■□□□ 1.71
RPS28-203ENST00000600659 CFAP43Q8NDM7 1665 aa25.72■■□□□ 1.71
RPS28-203ENST00000600659 HECW1Q76N89 1606 aa25.71■■□□□ 1.71
RPS28-203ENST00000600659 CDK13Q14004 1512 aaKnown RBP25.7■■□□□ 1.71
RPS28-203ENST00000600659 CLIP1P30622 1438 aa25.69■■□□□ 1.7
RPS28-203ENST00000600659 PCF11O94913 1555 aaKnown RBP25.68■■□□□ 1.7
RPS28-203ENST00000600659 ABCA9Q8IUA7 1624 aa25.67■■□□□ 1.7
RPS28-203ENST00000600659 KDM6BO15054 1643 aa25.63■■□□□ 1.69
RPS28-203ENST00000600659 MAGI3Q5TCQ9 1506 aa25.62■■□□□ 1.69
RPS28-203ENST00000600659 KCNH8Q96L42 1107 aa25.62■■□□□ 1.69
RPS28-203ENST00000600659 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
RPS28-203ENST00000600659 CD109Q6YHK3 1445 aa25.6■■□□□ 1.69
RPS28-203ENST00000600659 CASKIN1Q8WXD9 1431 aa25.59■■□□□ 1.69
RPS28-203ENST00000600659 TEX14Q8IWB6 1497 aa25.59■■□□□ 1.69
RPS28-203ENST00000600659 COL17A1Q9UMD9 1497 aaPredicted RBP25.56■■□□□ 1.68
RPS28-203ENST00000600659 LOC105371045A0A1W2PR82 267 aa25.56■■□□□ 1.68
RPS28-203ENST00000600659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
RPS28-203ENST00000600659 HNRNPUL2Q1KMD3 747 aaKnown RBP25.55■■□□□ 1.68
RPS28-203ENST00000600659 FYCO1Q9BQS8 1478 aa25.54■■□□□ 1.68
RPS28-203ENST00000600659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.53■■□□□ 1.683e-7■□□□□ 9.3
RPS28-203ENST00000600659 TTC37Q6PGP7 1564 aa25.53■■□□□ 1.68
RPS28-203ENST00000600659 PLEKHD1A6NEE1 506 aa25.5■■□□□ 1.67
RPS28-203ENST00000600659 CCDC18Q5T9S5 1454 aa25.48■■□□□ 1.67
RPS28-203ENST00000600659 KIF14Q15058 1648 aa25.47■■□□□ 1.67
RPS28-203ENST00000600659 ATP1B4Q9UN42 357 aaPredicted RBP25.46■■□□□ 1.67
RPS28-203ENST00000600659 TROQ12816 1431 aaPredicted RBP25.44■■□□□ 1.66
RPS28-203ENST00000600659 ARAP3Q8WWN8 1544 aa25.39■■□□□ 1.66
RPS28-203ENST00000600659 NEO1Q92859 1461 aa25.39■■□□□ 1.65
RPS28-203ENST00000600659 MYO5CQ9NQX4 1742 aa25.36■■□□□ 1.65
RPS28-203ENST00000600659 FRMPD1Q5SYB0 1578 aa25.34■■□□□ 1.65
RPS28-203ENST00000600659 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
RPS28-203ENST00000600659 CFAP74Q9C0B2 1584 aa25.33■■□□□ 1.65
RPS28-203ENST00000600659 PHLDB1Q86UU1 1377 aa25.32■■□□□ 1.64
RPS28-203ENST00000600659 PLCH2O75038 1416 aa25.31■■□□□ 1.64
RPS28-203ENST00000600659 FANCAO15360 1455 aa25.31■■□□□ 1.64
RPS28-203ENST00000600659 VPS8Q8N3P4 1428 aa25.3■■□□□ 1.64
RPS28-203ENST00000600659 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
RPS28-203ENST00000600659 RICTORQ6R327 1708 aa25.28■■□□□ 1.64
RPS28-203ENST00000600659 PREX2Q70Z35 1606 aa25.27■■□□□ 1.64
RPS28-203ENST00000600659 CDC42BPAQ5VT25 1732 aa25.26■■□□□ 1.63
RPS28-203ENST00000600659 AKNAQ7Z591 1439 aa25.26■■□□□ 1.63
RPS28-203ENST00000600659 TIAM1Q13009 1591 aa25.21■■□□□ 1.63
RPS28-203ENST00000600659 EHBP1L1Q8N3D4 1523 aa25.21■■□□□ 1.63
RPS28-203ENST00000600659 RAPGEF3O95398 923 aa25.18■■□□□ 1.62
RPS28-203ENST00000600659 ARHGAP5Q13017 1502 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms