RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
SNRPA-208ENST00000600456 KIAA0586Q9BVV6 1533 aa23.05■■□□□ 1.28
SNRPA-208ENST00000600456 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
SNRPA-208ENST00000600456 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
SNRPA-208ENST00000600456 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
SNRPA-208ENST00000600456 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
SNRPA-208ENST00000600456 PRG4Q92954 1404 aaPredicted RBP22.91■■□□□ 1.26
SNRPA-208ENST00000600456 IQGAP2Q13576 1575 aa22.91■■□□□ 1.26
SNRPA-208ENST00000600456 ERCC6L2Q5T890 1561 aa22.88■■□□□ 1.25
SNRPA-208ENST00000600456 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
SNRPA-208ENST00000600456 KIF21BO75037 1637 aa22.86■■□□□ 1.25
SNRPA-208ENST00000600456 CTTNBP2Q8WZ74 1663 aa22.83■■□□□ 1.24
SNRPA-208ENST00000600456 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
SNRPA-208ENST00000600456 CARMIL2Q6F5E8 1435 aa22.81■■□□□ 1.24
SNRPA-208ENST00000600456 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
SNRPA-208ENST00000600456 DISP1Q96F81 1524 aa22.74■■□□□ 1.23
SNRPA-208ENST00000600456 TNIKQ9UKE5 1360 aa22.7■■□□□ 1.22
SNRPA-208ENST00000600456 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
SNRPA-208ENST00000600456 PTPRGP23470 1445 aa22.67■■□□□ 1.22
SNRPA-208ENST00000600456 UBTFP17480 764 aaKnown RBP22.64■■□□□ 1.21
SNRPA-208ENST00000600456 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
SNRPA-208ENST00000600456 EHMT2Q96KQ7 1210 aa22.58■■□□□ 1.21
SNRPA-208ENST00000600456 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
SNRPA-208ENST00000600456 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
SNRPA-208ENST00000600456 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
SNRPA-208ENST00000600456 UACAQ9BZF9 1416 aa22.53■■□□□ 1.2
SNRPA-208ENST00000600456 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
SNRPA-208ENST00000600456 NPM1P06748 294 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNRPA-208ENST00000600456 RANGAP1P46060 587 aaPredicted RBP22.49■■□□□ 1.19
SNRPA-208ENST00000600456 ABCC2Q92887 1545 aa22.48■■□□□ 1.19
SNRPA-208ENST00000600456 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
SNRPA-208ENST00000600456 PLB1Q6P1J6 1458 aa22.44■■□□□ 1.18
SNRPA-208ENST00000600456 ABCA8O94911 1581 aa22.43■■□□□ 1.18
SNRPA-208ENST00000600456 FHOD3Q2V2M9 1422 aa22.43■■□□□ 1.18
SNRPA-208ENST00000600456 MAPKBP1O60336 1514 aa22.41■■□□□ 1.18
SNRPA-208ENST00000600456 KDM5BQ9UGL1 1544 aa22.4■■□□□ 1.18
SNRPA-208ENST00000600456 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
SNRPA-208ENST00000600456 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
SNRPA-208ENST00000600456 FMN1Q68DA7 1419 aa22.33■■□□□ 1.17
SNRPA-208ENST00000600456 CLIP1P30622 1438 aa22.32■■□□□ 1.16
SNRPA-208ENST00000600456 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
SNRPA-208ENST00000600456 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
SNRPA-208ENST00000600456 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
SNRPA-208ENST00000600456 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
SNRPA-208ENST00000600456 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
SNRPA-208ENST00000600456 NUP153P49790 1475 aaKnown RBP22.26■■□□□ 1.15
SNRPA-208ENST00000600456 CEP162Q5TB80 1403 aa22.25■■□□□ 1.15
SNRPA-208ENST00000600456 ATP10BO94823 1461 aa22.24■■□□□ 1.15
SNRPA-208ENST00000600456 DIP2BQ9P265 1576 aa22.23■■□□□ 1.15
SNRPA-208ENST00000600456 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
SNRPA-208ENST00000600456 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
SNRPA-208ENST00000600456 KIF13AQ9H1H9 1805 aa22.18■■□□□ 1.14
SNRPA-208ENST00000600456 HECW1Q76N89 1606 aa22.18■■□□□ 1.14
SNRPA-208ENST00000600456 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
SNRPA-208ENST00000600456 GLI2P10070 1586 aa22.16■■□□□ 1.14
SNRPA-208ENST00000600456 EPRSP07814 1512 aaKnown RBP22.16■■□□□ 1.14
SNRPA-208ENST00000600456 CASKIN1Q8WXD9 1431 aa22.15■■□□□ 1.14
SNRPA-208ENST00000600456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
SNRPA-208ENST00000600456 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.13
SNRPA-208ENST00000600456 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
SNRPA-208ENST00000600456 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
SNRPA-208ENST00000600456 PCF11O94913 1555 aaKnown RBP22.11■■□□□ 1.13
SNRPA-208ENST00000600456 CDK13Q14004 1512 aaKnown RBP22.08■■□□□ 1.13
SNRPA-208ENST00000600456 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
SNRPA-208ENST00000600456 CCDC18Q5T9S5 1454 aa22.07■■□□□ 1.12
SNRPA-208ENST00000600456 KCNH8Q96L42 1107 aa22.06■■□□□ 1.12
SNRPA-208ENST00000600456 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
SNRPA-208ENST00000600456 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
SNRPA-208ENST00000600456 CFAP43Q8NDM7 1665 aa22■■□□□ 1.11
SNRPA-208ENST00000600456 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
SNRPA-208ENST00000600456 CD109Q6YHK3 1445 aa21.98■■□□□ 1.11
SNRPA-208ENST00000600456 LRRIQ1Q96JM4 1722 aa21.98■■□□□ 1.11
SNRPA-208ENST00000600456 ABCA9Q8IUA7 1624 aa21.98■■□□□ 1.11
SNRPA-208ENST00000600456 TEX14Q8IWB6 1497 aa21.97■■□□□ 1.11
SNRPA-208ENST00000600456 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
SNRPA-208ENST00000600456 TROQ12816 1431 aaPredicted RBP21.96■■□□□ 1.11
SNRPA-208ENST00000600456 PPRC1Q5VV67 1664 aaKnown RBP21.95■■□□□ 1.1
SNRPA-208ENST00000600456 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
SNRPA-208ENST00000600456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.9■■□□□ 1.1
SNRPA-208ENST00000600456 KIF14Q15058 1648 aa21.89■■□□□ 1.09
SNRPA-208ENST00000600456 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
SNRPA-208ENST00000600456 PHLDB1Q86UU1 1377 aa21.85■■□□□ 1.09
SNRPA-208ENST00000600456 KDM6BO15054 1643 aa21.84■■□□□ 1.09
SNRPA-208ENST00000600456 MTUS2Q5JR59 1369 aa21.83■■□□□ 1.08
SNRPA-208ENST00000600456 NEO1Q92859 1461 aa21.83■■□□□ 1.08
SNRPA-208ENST00000600456 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
SNRPA-208ENST00000600456 TIAM1Q13009 1591 aa21.81■■□□□ 1.08
SNRPA-208ENST00000600456 PLCH2O75038 1416 aa21.8■■□□□ 1.08
SNRPA-208ENST00000600456 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
SNRPA-208ENST00000600456 EHBP1L1Q8N3D4 1523 aa21.8■■□□□ 1.08
SNRPA-208ENST00000600456 CFAP74Q9C0B2 1584 aa21.77■■□□□ 1.08
SNRPA-208ENST00000600456 FANCAO15360 1455 aa21.77■■□□□ 1.07
SNRPA-208ENST00000600456 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
SNRPA-208ENST00000600456 MYO5CQ9NQX4 1742 aa21.75■■□□□ 1.07
SNRPA-208ENST00000600456 APLP2Q06481 763 aa21.73■■□□□ 1.07
SNRPA-208ENST00000600456 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
SNRPA-208ENST00000600456 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
SNRPA-208ENST00000600456 LRRC9Q6ZRR7 1453 aa21.72■■□□□ 1.07
SNRPA-208ENST00000600456 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.06
SNRPA-208ENST00000600456 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms