RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
TMEM38A-203ENST00000599479 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
TMEM38A-203ENST00000599479 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
TMEM38A-203ENST00000599479 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
TMEM38A-203ENST00000599479 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
TMEM38A-203ENST00000599479 EEA1Q15075 1411 aa20.47■□□□□ 0.87
TMEM38A-203ENST00000599479 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
TMEM38A-203ENST00000599479 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
TMEM38A-203ENST00000599479 IQGAP2Q13576 1575 aa20.34■□□□□ 0.85
TMEM38A-203ENST00000599479 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
TMEM38A-203ENST00000599479 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
TMEM38A-203ENST00000599479 CARMIL2Q6F5E8 1435 aa20.29■□□□□ 0.84
TMEM38A-203ENST00000599479 DISP1Q96F81 1524 aa20.28■□□□□ 0.84
TMEM38A-203ENST00000599479 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
TMEM38A-203ENST00000599479 PTPRGP23470 1445 aa20.25■□□□□ 0.83
TMEM38A-203ENST00000599479 KIF21BO75037 1637 aa20.19■□□□□ 0.82
TMEM38A-203ENST00000599479 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
TMEM38A-203ENST00000599479 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
TMEM38A-203ENST00000599479 KIAA0556O60303 1618 aa20.15■□□□□ 0.82
TMEM38A-203ENST00000599479 UHRF1BP1LA0JNW5 1464 aa20.11■□□□□ 0.81
TMEM38A-203ENST00000599479 ADCY10Q96PN6 1610 aa20.11■□□□□ 0.81
TMEM38A-203ENST00000599479 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
TMEM38A-203ENST00000599479 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
TMEM38A-203ENST00000599479 NPM1P06748 294 aaKnown RBP eCLIP20.09■□□□□ 0.81
TMEM38A-203ENST00000599479 TTBK1Q5TCY1 1321 aaPredicted RBP20.07■□□□□ 0.8
TMEM38A-203ENST00000599479 ABCC2Q92887 1545 aa20.05■□□□□ 0.8
TMEM38A-203ENST00000599479 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
TMEM38A-203ENST00000599479 SAMD9Q5K651 1589 aa20.04■□□□□ 0.8
TMEM38A-203ENST00000599479 MAPKBP1O60336 1514 aa20.03■□□□□ 0.8
TMEM38A-203ENST00000599479 P3H3Q8IVL6 736 aa20.02■□□□□ 0.8
TMEM38A-203ENST00000599479 KDM5BQ9UGL1 1544 aa20.02■□□□□ 0.79
TMEM38A-203ENST00000599479 PLB1Q6P1J6 1458 aa20■□□□□ 0.79
TMEM38A-203ENST00000599479 ABCA8O94911 1581 aa19.98■□□□□ 0.79
TMEM38A-203ENST00000599479 ABCC10Q5T3U5 1492 aa19.97■□□□□ 0.79
TMEM38A-203ENST00000599479 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
TMEM38A-203ENST00000599479 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
TMEM38A-203ENST00000599479 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
TMEM38A-203ENST00000599479 ASXL2Q76L83 1435 aa19.92■□□□□ 0.78
TMEM38A-203ENST00000599479 FAM69CQ0P6D2 419 aa19.91■□□□□ 0.78
TMEM38A-203ENST00000599479 FHOD3Q2V2M9 1422 aa19.91■□□□□ 0.78
TMEM38A-203ENST00000599479 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
TMEM38A-203ENST00000599479 DIP2BQ9P265 1576 aa19.87■□□□□ 0.77
TMEM38A-203ENST00000599479 ATP10BO94823 1461 aa19.86■□□□□ 0.77
TMEM38A-203ENST00000599479 ZCCHC11Q5TAX3 1644 aaKnown RBP19.85■□□□□ 0.77
TMEM38A-203ENST00000599479 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
TMEM38A-203ENST00000599479 NUP153P49790 1475 aaKnown RBP19.81■□□□□ 0.76
TMEM38A-203ENST00000599479 GLI2P10070 1586 aa19.81■□□□□ 0.76
TMEM38A-203ENST00000599479 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
TMEM38A-203ENST00000599479 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
TMEM38A-203ENST00000599479 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
TMEM38A-203ENST00000599479 FMN1Q68DA7 1419 aa19.79■□□□□ 0.76
TMEM38A-203ENST00000599479 ARID3CA6NKF2 412 aa19.74■□□□□ 0.75
TMEM38A-203ENST00000599479 CLIP1P30622 1438 aa19.74■□□□□ 0.75
TMEM38A-203ENST00000599479 LOC105371045A0A1W2PR82 267 aa19.73■□□□□ 0.75
TMEM38A-203ENST00000599479 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
TMEM38A-203ENST00000599479 PLEKHD1A6NEE1 506 aa19.68■□□□□ 0.74
TMEM38A-203ENST00000599479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.67■□□□□ 0.74
TMEM38A-203ENST00000599479 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
TMEM38A-203ENST00000599479 MAP3K4Q9Y6R4 1608 aa19.66■□□□□ 0.74
TMEM38A-203ENST00000599479 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
TMEM38A-203ENST00000599479 CEP162Q5TB80 1403 aa19.64■□□□□ 0.73
TMEM38A-203ENST00000599479 CD109Q6YHK3 1445 aa19.64■□□□□ 0.73
TMEM38A-203ENST00000599479 MAGI3Q5TCQ9 1506 aa19.63■□□□□ 0.73
TMEM38A-203ENST00000599479 PPRC1Q5VV67 1664 aaKnown RBP19.62■□□□□ 0.73
TMEM38A-203ENST00000599479 HECW1Q76N89 1606 aa19.61■□□□□ 0.73
TMEM38A-203ENST00000599479 CDK13Q14004 1512 aaKnown RBP19.61■□□□□ 0.73
TMEM38A-203ENST00000599479 ATP1B4Q9UN42 357 aaPredicted RBP19.6■□□□□ 0.73
TMEM38A-203ENST00000599479 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
TMEM38A-203ENST00000599479 TEX14Q8IWB6 1497 aa19.59■□□□□ 0.73
TMEM38A-203ENST00000599479 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.72
TMEM38A-203ENST00000599479 ABCA9Q8IUA7 1624 aa19.58■□□□□ 0.72
TMEM38A-203ENST00000599479 TSPOAP1O95153 1857 aa19.57■□□□□ 0.72
TMEM38A-203ENST00000599479 FYCO1Q9BQS8 1478 aa19.56■□□□□ 0.72
TMEM38A-203ENST00000599479 COL17A1Q9UMD9 1497 aaPredicted RBP19.56■□□□□ 0.72
TMEM38A-203ENST00000599479 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
TMEM38A-203ENST00000599479 PHLDB1Q86UU1 1377 aa19.53■□□□□ 0.72
TMEM38A-203ENST00000599479 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
TMEM38A-203ENST00000599479 TROQ12816 1431 aaPredicted RBP19.52■□□□□ 0.72
TMEM38A-203ENST00000599479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.51■□□□□ 0.71
TMEM38A-203ENST00000599479 KDM6BO15054 1643 aa19.5■□□□□ 0.71
TMEM38A-203ENST00000599479 LRRIQ1Q96JM4 1722 aa19.49■□□□□ 0.71
TMEM38A-203ENST00000599479 NEO1Q92859 1461 aa19.47■□□□□ 0.71
TMEM38A-203ENST00000599479 ARAP3Q8WWN8 1544 aa19.46■□□□□ 0.71
TMEM38A-203ENST00000599479 PLCH2O75038 1416 aa19.45■□□□□ 0.7
TMEM38A-203ENST00000599479 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
TMEM38A-203ENST00000599479 TTC37Q6PGP7 1564 aa19.42■□□□□ 0.7
TMEM38A-203ENST00000599479 FANCAO15360 1455 aa19.39■□□□□ 0.69
TMEM38A-203ENST00000599479 KIF14Q15058 1648 aa19.38■□□□□ 0.69
TMEM38A-203ENST00000599479 EFCAB2Q5VUJ9 269 aa19.38■□□□□ 0.69
TMEM38A-203ENST00000599479 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
TMEM38A-203ENST00000599479 RAPGEF3O95398 923 aa19.35■□□□□ 0.69
TMEM38A-203ENST00000599479 MTUS2Q5JR59 1369 aa19.32■□□□□ 0.68
TMEM38A-203ENST00000599479 MAP3K1Q13233 1512 aa19.31■□□□□ 0.68
TMEM38A-203ENST00000599479 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
TMEM38A-203ENST00000599479 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
TMEM38A-203ENST00000599479 CFAP74Q9C0B2 1584 aa19.29■□□□□ 0.68
TMEM38A-203ENST00000599479 SCAPERQ9BY12 1400 aa19.28■□□□□ 0.68
TMEM38A-203ENST00000599479 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.68
TMEM38A-203ENST00000599479 ADGRL1O94910 1474 aa19.27■□□□□ 0.67
TMEM38A-203ENST00000599479 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms