RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 KDM6BO15054 1643 aa13.45□□□□□ -0.26
CEACAM1-213ENST00000599389 ADCY10Q96PN6 1610 aa13.38□□□□□ -0.27
CEACAM1-213ENST00000599389 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
CEACAM1-213ENST00000599389 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
CEACAM1-213ENST00000599389 PRG4Q92954 1404 aaPredicted RBP13.35□□□□□ -0.27
CEACAM1-213ENST00000599389 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
CEACAM1-213ENST00000599389 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
CEACAM1-213ENST00000599389 TSPOAP1O95153 1857 aa13.34□□□□□ -0.27
CEACAM1-213ENST00000599389 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
CEACAM1-213ENST00000599389 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
CEACAM1-213ENST00000599389 PPRC1Q5VV67 1664 aaKnown RBP13.29□□□□□ -0.28
CEACAM1-213ENST00000599389 WRNQ14191 1432 aaPredicted RBP eCLIP13.28□□□□□ -0.28
CEACAM1-213ENST00000599389 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.28
CEACAM1-213ENST00000599389 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
CEACAM1-213ENST00000599389 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
CEACAM1-213ENST00000599389 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
CEACAM1-213ENST00000599389 GLI2P10070 1586 aa13.21□□□□□ -0.29
CEACAM1-213ENST00000599389 FOXD1Q16676 465 aa13.19□□□□□ -0.3
CEACAM1-213ENST00000599389 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
CEACAM1-213ENST00000599389 ABCC2Q92887 1545 aa13.14□□□□□ -0.31
CEACAM1-213ENST00000599389 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
CEACAM1-213ENST00000599389 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
CEACAM1-213ENST00000599389 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
CEACAM1-213ENST00000599389 ASXL2Q76L83 1435 aa13.11□□□□□ -0.31
CEACAM1-213ENST00000599389 PLB1Q6P1J6 1458 aa13.11□□□□□ -0.31
CEACAM1-213ENST00000599389 CUL7Q14999 1698 aa13.1□□□□□ -0.31
CEACAM1-213ENST00000599389 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
CEACAM1-213ENST00000599389 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
CEACAM1-213ENST00000599389 EPRSP07814 1512 aaKnown RBP13.06□□□□□ -0.32
CEACAM1-213ENST00000599389 PTPRGP23470 1445 aa13.05□□□□□ -0.32
CEACAM1-213ENST00000599389 TEX14Q8IWB6 1497 aa13.05□□□□□ -0.32
CEACAM1-213ENST00000599389 KDM5BQ9UGL1 1544 aa13.02□□□□□ -0.33
CEACAM1-213ENST00000599389 TNIKQ9UKE5 1360 aa13□□□□□ -0.33
CEACAM1-213ENST00000599389 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
CEACAM1-213ENST00000599389 KIF21BO75037 1637 aa12.98□□□□□ -0.33
CEACAM1-213ENST00000599389 UACAQ9BZF9 1416 aa12.97□□□□□ -0.33
CEACAM1-213ENST00000599389 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.33
CEACAM1-213ENST00000599389 IGF1RP08069 1367 aa12.96□□□□□ -0.34
CEACAM1-213ENST00000599389 CARMIL2Q6F5E8 1435 aa12.95□□□□□ -0.34
CEACAM1-213ENST00000599389 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
CEACAM1-213ENST00000599389 ADAMTSL3P82987 1691 aa12.94□□□□□ -0.34
CEACAM1-213ENST00000599389 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
CEACAM1-213ENST00000599389 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
CEACAM1-213ENST00000599389 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
CEACAM1-213ENST00000599389 WDR7Q9Y4E6 1490 aa12.92□□□□□ -0.34
CEACAM1-213ENST00000599389 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
CEACAM1-213ENST00000599389 PTPRMP28827 1452 aa12.9□□□□□ -0.34
CEACAM1-213ENST00000599389 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
CEACAM1-213ENST00000599389 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
CEACAM1-213ENST00000599389 KIAA0556O60303 1618 aa12.86□□□□□ -0.35
CEACAM1-213ENST00000599389 ARAP3Q8WWN8 1544 aa12.86□□□□□ -0.35
CEACAM1-213ENST00000599389 TTBK1Q5TCY1 1321 aaPredicted RBP12.84□□□□□ -0.35
CEACAM1-213ENST00000599389 BCORL1Q5H9F3 1711 aa12.84□□□□□ -0.35
CEACAM1-213ENST00000599389 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
CEACAM1-213ENST00000599389 CARMIL1Q5VZK9 1371 aa12.82□□□□□ -0.36
CEACAM1-213ENST00000599389 MADDQ8WXG6 1647 aa12.82□□□□□ -0.36
CEACAM1-213ENST00000599389 SOCS7O14512 581 aa12.82□□□□□ -0.36
CEACAM1-213ENST00000599389 ILDR2Q71H61 639 aa12.82□□□□□ -0.36
CEACAM1-213ENST00000599389 ABCA8O94911 1581 aa12.78□□□□□ -0.36
CEACAM1-213ENST00000599389 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.37
CEACAM1-213ENST00000599389 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
CEACAM1-213ENST00000599389 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
CEACAM1-213ENST00000599389 SPATA31D1Q6ZQQ2 1576 aa12.73□□□□□ -0.37
CEACAM1-213ENST00000599389 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
CEACAM1-213ENST00000599389 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
CEACAM1-213ENST00000599389 ARHGEF40Q8TER5 1519 aa12.72□□□□□ -0.37
CEACAM1-213ENST00000599389 PHLDB1Q86UU1 1377 aa12.72□□□□□ -0.37
CEACAM1-213ENST00000599389 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
CEACAM1-213ENST00000599389 NEO1Q92859 1461 aa12.68□□□□□ -0.38
CEACAM1-213ENST00000599389 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
CEACAM1-213ENST00000599389 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
CEACAM1-213ENST00000599389 SIGLEC1Q9BZZ2 1709 aa12.67□□□□□ -0.38
CEACAM1-213ENST00000599389 MSH5O43196 834 aa12.65□□□□□ -0.38
CEACAM1-213ENST00000599389 HSPA2P54652 639 aa12.65□□□□□ -0.38
CEACAM1-213ENST00000599389 KCNH8Q96L42 1107 aa12.65□□□□□ -0.38
CEACAM1-213ENST00000599389 RICTORQ6R327 1708 aa12.65□□□□□ -0.38
CEACAM1-213ENST00000599389 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
CEACAM1-213ENST00000599389 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
CEACAM1-213ENST00000599389 RAPGEF3O95398 923 aa12.62□□□□□ -0.39
CEACAM1-213ENST00000599389 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
CEACAM1-213ENST00000599389 ZMYM4Q5VZL5 1548 aa12.61□□□□□ -0.39
CEACAM1-213ENST00000599389 ATP10BO94823 1461 aa12.61□□□□□ -0.39
CEACAM1-213ENST00000599389 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
CEACAM1-213ENST00000599389 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
CEACAM1-213ENST00000599389 FANCAO15360 1455 aa12.58□□□□□ -0.39
CEACAM1-213ENST00000599389 FHOD3Q2V2M9 1422 aa12.58□□□□□ -0.4
CEACAM1-213ENST00000599389 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
CEACAM1-213ENST00000599389 POGZQ7Z3K3 1410 aa12.54□□□□□ -0.4
CEACAM1-213ENST00000599389 YEATS2Q9ULM3 1422 aa12.54□□□□□ -0.4
CEACAM1-213ENST00000599389 DENND4BO75064 1496 aaPredicted RBP12.54□□□□□ -0.4
CEACAM1-213ENST00000599389 EFCAB5A4FU69 1503 aa12.54□□□□□ -0.4
CEACAM1-213ENST00000599389 ARHGEF12Q9NZN5 1544 aa12.54□□□□□ -0.4
CEACAM1-213ENST00000599389 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
CEACAM1-213ENST00000599389 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
CEACAM1-213ENST00000599389 CFAP74Q9C0B2 1584 aa12.53□□□□□ -0.4
CEACAM1-213ENST00000599389 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
CEACAM1-213ENST00000599389 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
CEACAM1-213ENST00000599389 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
CEACAM1-213ENST00000599389 MAGI2Q86UL8 1455 aa12.51□□□□□ -0.41
CEACAM1-213ENST00000599389 SETD1BQ9UPS6 1966 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms