RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
ZNF548-209ENST00000598895 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
ZNF548-209ENST00000598895 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
ZNF548-209ENST00000598895 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.83
ZNF548-209ENST00000598895 JPH4Q96JJ6 628 aa20.26■□□□□ 0.83
ZNF548-209ENST00000598895 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
ZNF548-209ENST00000598895 IQGAP2Q13576 1575 aa20.19■□□□□ 0.82
ZNF548-209ENST00000598895 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
ZNF548-209ENST00000598895 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
ZNF548-209ENST00000598895 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
ZNF548-209ENST00000598895 EEA1Q15075 1411 aa20.13■□□□□ 0.81
ZNF548-209ENST00000598895 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
ZNF548-209ENST00000598895 CARMIL2Q6F5E8 1435 aa20.06■□□□□ 0.8
ZNF548-209ENST00000598895 DISP1Q96F81 1524 aa20.04■□□□□ 0.8
ZNF548-209ENST00000598895 UGGT2Q9NYU1 1516 aa20.04■□□□□ 0.8
ZNF548-209ENST00000598895 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
ZNF548-209ENST00000598895 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
ZNF548-209ENST00000598895 KIAA0556O60303 1618 aa20.02■□□□□ 0.79
ZNF548-209ENST00000598895 PTPRGP23470 1445 aa20■□□□□ 0.79
ZNF548-209ENST00000598895 KIF21BO75037 1637 aa19.99■□□□□ 0.79
ZNF548-209ENST00000598895 ADCY10Q96PN6 1610 aa19.99■□□□□ 0.79
ZNF548-209ENST00000598895 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
ZNF548-209ENST00000598895 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
ZNF548-209ENST00000598895 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
ZNF548-209ENST00000598895 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
ZNF548-209ENST00000598895 NPM1P06748 294 aaKnown RBP eCLIP19.9■□□□□ 0.78
ZNF548-209ENST00000598895 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
ZNF548-209ENST00000598895 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
ZNF548-209ENST00000598895 SAMD9Q5K651 1589 aa19.85■□□□□ 0.77
ZNF548-209ENST00000598895 ABCC2Q92887 1545 aa19.84■□□□□ 0.77
ZNF548-209ENST00000598895 PLB1Q6P1J6 1458 aa19.82■□□□□ 0.76
ZNF548-209ENST00000598895 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
ZNF548-209ENST00000598895 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
ZNF548-209ENST00000598895 KIF13AQ9H1H9 1805 aa19.81■□□□□ 0.76
ZNF548-209ENST00000598895 ZCCHC11Q5TAX3 1644 aaKnown RBP19.77■□□□□ 0.76
ZNF548-209ENST00000598895 ABCA8O94911 1581 aa19.77■□□□□ 0.76
ZNF548-209ENST00000598895 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
ZNF548-209ENST00000598895 DIP2BQ9P265 1576 aa19.74■□□□□ 0.75
ZNF548-209ENST00000598895 KDM5BQ9UGL1 1544 aa19.73■□□□□ 0.75
ZNF548-209ENST00000598895 ARID3CA6NKF2 412 aa19.73■□□□□ 0.75
ZNF548-209ENST00000598895 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
ZNF548-209ENST00000598895 ABCC10Q5T3U5 1492 aa19.73■□□□□ 0.75
ZNF548-209ENST00000598895 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
ZNF548-209ENST00000598895 ASXL2Q76L83 1435 aa19.72■□□□□ 0.75
ZNF548-209ENST00000598895 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
ZNF548-209ENST00000598895 TSPOAP1O95153 1857 aa19.66■□□□□ 0.74
ZNF548-209ENST00000598895 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
ZNF548-209ENST00000598895 ATP10BO94823 1461 aa19.6■□□□□ 0.73
ZNF548-209ENST00000598895 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
ZNF548-209ENST00000598895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
ZNF548-209ENST00000598895 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
ZNF548-209ENST00000598895 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
ZNF548-209ENST00000598895 NUP153P49790 1475 aaKnown RBP19.59■□□□□ 0.73
ZNF548-209ENST00000598895 GLI2P10070 1586 aa19.57■□□□□ 0.72
ZNF548-209ENST00000598895 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
ZNF548-209ENST00000598895 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
ZNF548-209ENST00000598895 FMN1Q68DA7 1419 aa19.53■□□□□ 0.72
ZNF548-209ENST00000598895 MAP3K4Q9Y6R4 1608 aa19.53■□□□□ 0.72
ZNF548-209ENST00000598895 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.72
ZNF548-209ENST00000598895 CLIP1P30622 1438 aa19.52■□□□□ 0.72
ZNF548-209ENST00000598895 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
ZNF548-209ENST00000598895 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
ZNF548-209ENST00000598895 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
ZNF548-209ENST00000598895 PCF11O94913 1555 aaKnown RBP19.47■□□□□ 0.71
ZNF548-209ENST00000598895 CFAP43Q8NDM7 1665 aa19.46■□□□□ 0.71
ZNF548-209ENST00000598895 LRRIQ1Q96JM4 1722 aa19.46■□□□□ 0.71
ZNF548-209ENST00000598895 KDM6BO15054 1643 aa19.46■□□□□ 0.71
ZNF548-209ENST00000598895 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
ZNF548-209ENST00000598895 CD109Q6YHK3 1445 aa19.42■□□□□ 0.7
ZNF548-209ENST00000598895 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
ZNF548-209ENST00000598895 ABCA9Q8IUA7 1624 aa19.4■□□□□ 0.7
ZNF548-209ENST00000598895 TEX14Q8IWB6 1497 aa19.4■□□□□ 0.7
ZNF548-209ENST00000598895 CASKIN1Q8WXD9 1431 aa19.38■□□□□ 0.69
ZNF548-209ENST00000598895 MAGI3Q5TCQ9 1506 aa19.35■□□□□ 0.69
ZNF548-209ENST00000598895 FYCO1Q9BQS8 1478 aa19.35■□□□□ 0.69
ZNF548-209ENST00000598895 TTC37Q6PGP7 1564 aa19.34■□□□□ 0.69
ZNF548-209ENST00000598895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.34■□□□□ 0.69
ZNF548-209ENST00000598895 COL17A1Q9UMD9 1497 aaPredicted RBP19.33■□□□□ 0.68
ZNF548-209ENST00000598895 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
ZNF548-209ENST00000598895 KIF14Q15058 1648 aa19.31■□□□□ 0.68
ZNF548-209ENST00000598895 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
ZNF548-209ENST00000598895 TROQ12816 1431 aaPredicted RBP19.27■□□□□ 0.68
ZNF548-209ENST00000598895 MYO5CQ9NQX4 1742 aa19.24■□□□□ 0.67
ZNF548-209ENST00000598895 FANCAO15360 1455 aa19.21■□□□□ 0.67
ZNF548-209ENST00000598895 NEO1Q92859 1461 aa19.21■□□□□ 0.67
ZNF548-209ENST00000598895 CFAP74Q9C0B2 1584 aa19.19■□□□□ 0.66
ZNF548-209ENST00000598895 ARAP3Q8WWN8 1544 aa19.19■□□□□ 0.66
ZNF548-209ENST00000598895 PLCH2O75038 1416 aa19.17■□□□□ 0.66
ZNF548-209ENST00000598895 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
ZNF548-209ENST00000598895 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
ZNF548-209ENST00000598895 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
ZNF548-209ENST00000598895 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
ZNF548-209ENST00000598895 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
ZNF548-209ENST00000598895 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
ZNF548-209ENST00000598895 FRMPD1Q5SYB0 1578 aa19.14■□□□□ 0.65
ZNF548-209ENST00000598895 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.65
ZNF548-209ENST00000598895 PREX2Q70Z35 1606 aa19.13■□□□□ 0.65
ZNF548-209ENST00000598895 CDC42BPAQ5VT25 1732 aa19.12■□□□□ 0.65
ZNF548-209ENST00000598895 ADGRL1O94910 1474 aa19.11■□□□□ 0.65
ZNF548-209ENST00000598895 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms