RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 TSHZ2Q9NRE2 1034 aa8.92□□□□□ -0.98
PAF1-208ENST00000598594 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
PAF1-208ENST00000598594 PKD2Q13563 968 aa8.89□□□□□ -0.99
PAF1-208ENST00000598594 HAX1O00165 279 aa8.88□□□□□ -0.99
PAF1-208ENST00000598594 HRCP23327 699 aa8.86□□□□□ -0.99
PAF1-208ENST00000598594 NPM1P06748 294 aaKnown RBP eCLIP8.85□□□□□ -0.99
PAF1-208ENST00000598594 SPRYD3Q8NCJ5 442 aa8.82□□□□□ -1
PAF1-208ENST00000598594 SPDYE1Q8NFV5 336 aaPredicted RBP8.81□□□□□ -1
PAF1-208ENST00000598594 EIF5BO60841 1220 aaKnown RBP8.78□□□□□ -1
PAF1-208ENST00000598594 IFNLR1Q8IU57 520 aaPredicted RBP8.77□□□□□ -1.01
PAF1-208ENST00000598594 SSUH2Q9Y2M2 353 aa8.77□□□□□ -1.01
PAF1-208ENST00000598594 VASPP50552 380 aaPredicted RBP8.76□□□□□ -1.01
PAF1-208ENST00000598594 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
PAF1-208ENST00000598594 MKRN4PQ13434 485 aaPredicted RBP8.74□□□□□ -1.01
PAF1-208ENST00000598594 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
PAF1-208ENST00000598594 ZNF692Q9BU19 519 aaPredicted RBP8.73□□□□□ -1.01
PAF1-208ENST00000598594 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
PAF1-208ENST00000598594 EVX2Q03828 476 aa8.69□□□□□ -1.02
PAF1-208ENST00000598594 C19orf67A6NJJ6 358 aa8.67□□□□□ -1.02
PAF1-208ENST00000598594 LOC105371045A0A1W2PR82 267 aa8.66□□□□□ -1.02
PAF1-208ENST00000598594 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
PAF1-208ENST00000598594 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
PAF1-208ENST00000598594 PRR29P0C7W0 189 aa8.59□□□□□ -1.03
PAF1-208ENST00000598594 BRPF1P55201 1214 aaPredicted RBP8.59□□□□□ -1.03
PAF1-208ENST00000598594 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
PAF1-208ENST00000598594 SHROOM4Q9ULL8 1493 aa8.57□□□□□ -1.04
PAF1-208ENST00000598594 GABBR2O75899 941 aa8.56□□□□□ -1.04
PAF1-208ENST00000598594 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
PAF1-208ENST00000598594 CHADLQ6NUI6 762 aa8.55□□□□□ -1.04
PAF1-208ENST00000598594 ARID3AQ99856 593 aa8.54□□□□□ -1.04
PAF1-208ENST00000598594 RGL2O15211 777 aa8.53□□□□□ -1.04
PAF1-208ENST00000598594 ZMYND15Q9H091 742 aa8.52□□□□□ -1.05
PAF1-208ENST00000598594 SPDYE4A6NLX3 237 aa8.5□□□□□ -1.05
PAF1-208ENST00000598594 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
PAF1-208ENST00000598594 CHGAP10645 457 aaKnown RBP8.49□□□□□ -1.05
PAF1-208ENST00000598594 CLCN6P51797 869 aa8.49□□□□□ -1.05
PAF1-208ENST00000598594 NEUROD2Q15784 382 aa8.47□□□□□ -1.05
PAF1-208ENST00000598594 PROM2Q8N271 834 aa8.47□□□□□ -1.05
PAF1-208ENST00000598594 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
PAF1-208ENST00000598594 LHX8Q68G74 356 aa8.46□□□□□ -1.06
PAF1-208ENST00000598594 FARP1Q9Y4F1 1045 aaPredicted RBP8.46□□□□□ -1.06
PAF1-208ENST00000598594 PDIA4P13667 645 aaKnown RBP8.45□□□□□ -1.06
PAF1-208ENST00000598594 SPOCK2Q92563 424 aa8.44□□□□□ -1.06
PAF1-208ENST00000598594 IGSF3O75054 1194 aa8.41□□□□□ -1.06
PAF1-208ENST00000598594 HMGB1P09429 215 aaKnown RBP8.41□□□□□ -1.06
PAF1-208ENST00000598594 CDK11BP21127 795 aaKnown RBP8.41□□□□□ -1.06
PAF1-208ENST00000598594 LMOD2Q6P5Q4 547 aa8.41□□□□□ -1.06
PAF1-208ENST00000598594 CDK11AQ9UQ88 783 aaPredicted RBP8.41□□□□□ -1.06
PAF1-208ENST00000598594 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
PAF1-208ENST00000598594 STAG3Q9UJ98 1225 aa8.39□□□□□ -1.07
PAF1-208ENST00000598594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.38□□□□□ -1.07
PAF1-208ENST00000598594 C1orf115Q9H7X2 142 aa8.38□□□□□ -1.07
PAF1-208ENST00000598594 ZNF579Q8NAF0 562 aaKnown RBP8.36□□□□□ -1.07
PAF1-208ENST00000598594 HSP90B1P14625 803 aaKnown RBP8.35□□□□□ -1.07
PAF1-208ENST00000598594 PLEKHG5O94827 1062 aa8.34□□□□□ -1.07
PAF1-208ENST00000598594 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
PAF1-208ENST00000598594 DCBLD2Q96PD2 775 aa8.32□□□□□ -1.08
PAF1-208ENST00000598594 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
PAF1-208ENST00000598594 ZRANB1Q9UGI0 708 aa8.3□□□□□ -1.08
PAF1-208ENST00000598594 ARID3CA6NKF2 412 aa8.29□□□□□ -1.08
PAF1-208ENST00000598594 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
PAF1-208ENST00000598594 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
PAF1-208ENST00000598594 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
PAF1-208ENST00000598594 APBB1O00213 710 aa8.27□□□□□ -1.09
PAF1-208ENST00000598594 RAD21O60216 631 aa8.27□□□□□ -1.09
PAF1-208ENST00000598594 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
PAF1-208ENST00000598594 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
PAF1-208ENST00000598594 P3H3Q8IVL6 736 aa8.26□□□□□ -1.09
PAF1-208ENST00000598594 ZC3H15Q8WU90 426 aaKnown RBP8.25□□□□□ -1.09
PAF1-208ENST00000598594 PUS7Q96PZ0 661 aaKnown RBP8.25□□□□□ -1.09
PAF1-208ENST00000598594 RGS22Q8NE09 1264 aa8.22□□□□□ -1.09
PAF1-208ENST00000598594 GTPBP6O43824 516 aaPredicted RBP8.21□□□□□ -1.1
PAF1-208ENST00000598594 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
PAF1-208ENST00000598594 NKX1-1Q15270 411 aaPredicted RBP8.2□□□□□ -1.1
PAF1-208ENST00000598594 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
PAF1-208ENST00000598594 RBM25P49756 843 aaKnown RBP8.16□□□□□ -1.1
PAF1-208ENST00000598594 CIZ1Q9ULV3 898 aaPredicted RBP8.16□□□□□ -1.1
PAF1-208ENST00000598594 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.1
PAF1-208ENST00000598594 IL27Q8NEV9 243 aa8.14□□□□□ -1.11
PAF1-208ENST00000598594 KCNV2Q8TDN2 545 aa8.14□□□□□ -1.11
PAF1-208ENST00000598594 PHF12Q96QT6 1004 aa8.14□□□□□ -1.11
PAF1-208ENST00000598594 AEBP1Q8IUX7 1158 aa8.13□□□□□ -1.11
PAF1-208ENST00000598594 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
PAF1-208ENST00000598594 TRAIPQ9BWF2 469 aa8.13□□□□□ -1.11
PAF1-208ENST00000598594 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
PAF1-208ENST00000598594 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
PAF1-208ENST00000598594 CCDC82Q8N4S0 544 aa8.12□□□□□ -1.11
PAF1-208ENST00000598594 FOXD4L4Q8WXT5 416 aaPredicted RBP8.12□□□□□ -1.11
PAF1-208ENST00000598594 MKRN3Q13064 507 aaKnown RBP8.11□□□□□ -1.11
PAF1-208ENST00000598594 MFAP1P55081 439 aaKnown RBP8.09□□□□□ -1.11
PAF1-208ENST00000598594 OTUD5Q96G74 571 aa8.09□□□□□ -1.11
PAF1-208ENST00000598594 WDR70Q9NW82 654 aa8.09□□□□□ -1.11
PAF1-208ENST00000598594 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
PAF1-208ENST00000598594 ASTLQ6HA08 431 aaPredicted RBP8.07□□□□□ -1.12
PAF1-208ENST00000598594 PLCD3Q8N3E9 789 aa8.07□□□□□ -1.12
PAF1-208ENST00000598594 ZMYND10O75800 440 aa8.06□□□□□ -1.12
PAF1-208ENST00000598594 MS4A3Q96HJ5 214 aa8.06□□□□□ -1.12
PAF1-208ENST00000598594 E9PSI1 815 aa8.05□□□□□ -1.12
PAF1-208ENST00000598594 POTEB2H3BUK9 544 aa8.05□□□□□ -1.12
PAF1-208ENST00000598594 BRD2P25440 801 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms