RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
ARHGEF1-216ENST00000598587 KIAA0586Q9BVV6 1533 aa20.18■□□□□ 0.82
ARHGEF1-216ENST00000598587 ARAP1Q96P48 1450 aa20.16■□□□□ 0.82
ARHGEF1-216ENST00000598587 IQGAP2Q13576 1575 aa20.15■□□□□ 0.82
ARHGEF1-216ENST00000598587 PRXQ9BXM0 1461 aa20.12■□□□□ 0.81
ARHGEF1-216ENST00000598587 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF1-216ENST00000598587 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.81
ARHGEF1-216ENST00000598587 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
ARHGEF1-216ENST00000598587 JPH4Q96JJ6 628 aa20.07■□□□□ 0.8
ARHGEF1-216ENST00000598587 CYB5RLQ6IPT4 315 aa20.05■□□□□ 0.8
ARHGEF1-216ENST00000598587 KIF21BO75037 1637 aa20.05■□□□□ 0.8
ARHGEF1-216ENST00000598587 CARMIL2Q6F5E8 1435 aa20.01■□□□□ 0.79
ARHGEF1-216ENST00000598587 UGGT2Q9NYU1 1516 aa19.99■□□□□ 0.79
ARHGEF1-216ENST00000598587 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF1-216ENST00000598587 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
ARHGEF1-216ENST00000598587 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
ARHGEF1-216ENST00000598587 DISP1Q96F81 1524 aa19.91■□□□□ 0.78
ARHGEF1-216ENST00000598587 TNIKQ9UKE5 1360 aa19.88■□□□□ 0.77
ARHGEF1-216ENST00000598587 PTPRGP23470 1445 aa19.85■□□□□ 0.77
ARHGEF1-216ENST00000598587 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
ARHGEF1-216ENST00000598587 SAMD9Q5K651 1589 aa19.83■□□□□ 0.76
ARHGEF1-216ENST00000598587 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
ARHGEF1-216ENST00000598587 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
ARHGEF1-216ENST00000598587 TTBK1Q5TCY1 1321 aaPredicted RBP19.76■□□□□ 0.75
ARHGEF1-216ENST00000598587 ABCC2Q92887 1545 aa19.75■□□□□ 0.75
ARHGEF1-216ENST00000598587 UHRF1BP1LA0JNW5 1464 aa19.74■□□□□ 0.75
ARHGEF1-216ENST00000598587 NPM1P06748 294 aaKnown RBP eCLIP19.74■□□□□ 0.75
ARHGEF1-216ENST00000598587 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
ARHGEF1-216ENST00000598587 MAPKBP1O60336 1514 aa19.72■□□□□ 0.75
ARHGEF1-216ENST00000598587 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
ARHGEF1-216ENST00000598587 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
ARHGEF1-216ENST00000598587 ABCA8O94911 1581 aa19.68■□□□□ 0.74
ARHGEF1-216ENST00000598587 ZCCHC11Q5TAX3 1644 aaKnown RBP19.67■□□□□ 0.74
ARHGEF1-216ENST00000598587 KIF13AQ9H1H9 1805 aa19.66■□□□□ 0.74
ARHGEF1-216ENST00000598587 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
ARHGEF1-216ENST00000598587 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
ARHGEF1-216ENST00000598587 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
ARHGEF1-216ENST00000598587 KDM5BQ9UGL1 1544 aa19.63■□□□□ 0.73
ARHGEF1-216ENST00000598587 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
ARHGEF1-216ENST00000598587 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
ARHGEF1-216ENST00000598587 DIP2BQ9P265 1576 aa19.59■□□□□ 0.73
ARHGEF1-216ENST00000598587 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
ARHGEF1-216ENST00000598587 ABCC10Q5T3U5 1492 aa19.56■□□□□ 0.72
ARHGEF1-216ENST00000598587 FMN1Q68DA7 1419 aa19.55■□□□□ 0.72
ARHGEF1-216ENST00000598587 ASXL2Q76L83 1435 aa19.55■□□□□ 0.72
ARHGEF1-216ENST00000598587 HECW1Q76N89 1606 aa19.53■□□□□ 0.72
ARHGEF1-216ENST00000598587 WDR7Q9Y4E6 1490 aa19.5■□□□□ 0.71
ARHGEF1-216ENST00000598587 GLI2P10070 1586 aa19.49■□□□□ 0.71
ARHGEF1-216ENST00000598587 CLIP1P30622 1438 aa19.49■□□□□ 0.71
ARHGEF1-216ENST00000598587 TSPOAP1O95153 1857 aa19.48■□□□□ 0.71
ARHGEF1-216ENST00000598587 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
ARHGEF1-216ENST00000598587 FAM69CQ0P6D2 419 aa19.46■□□□□ 0.71
ARHGEF1-216ENST00000598587 ATP10BO94823 1461 aa19.45■□□□□ 0.7
ARHGEF1-216ENST00000598587 EPRSP07814 1512 aaKnown RBP19.45■□□□□ 0.7
ARHGEF1-216ENST00000598587 MAP3K4Q9Y6R4 1608 aa19.44■□□□□ 0.7
ARHGEF1-216ENST00000598587 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
ARHGEF1-216ENST00000598587 PCF11O94913 1555 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-216ENST00000598587 CEP162Q5TB80 1403 aa19.42■□□□□ 0.7
ARHGEF1-216ENST00000598587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-216ENST00000598587 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
ARHGEF1-216ENST00000598587 LRRIQ1Q96JM4 1722 aa19.39■□□□□ 0.7
ARHGEF1-216ENST00000598587 ARID3CA6NKF2 412 aa19.39■□□□□ 0.69
ARHGEF1-216ENST00000598587 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
ARHGEF1-216ENST00000598587 PPRC1Q5VV67 1664 aaKnown RBP19.36■□□□□ 0.69
ARHGEF1-216ENST00000598587 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
ARHGEF1-216ENST00000598587 CCDC18Q5T9S5 1454 aa19.36■□□□□ 0.69
ARHGEF1-216ENST00000598587 CASKIN1Q8WXD9 1431 aa19.36■□□□□ 0.69
ARHGEF1-216ENST00000598587 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF1-216ENST00000598587 ABCA9Q8IUA7 1624 aa19.35■□□□□ 0.69
ARHGEF1-216ENST00000598587 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
ARHGEF1-216ENST00000598587 LOC105371045A0A1W2PR82 267 aa19.31■□□□□ 0.68
ARHGEF1-216ENST00000598587 KDM6BO15054 1643 aa19.3■□□□□ 0.68
ARHGEF1-216ENST00000598587 PLEKHD1A6NEE1 506 aa19.3■□□□□ 0.68
ARHGEF1-216ENST00000598587 KCNH8Q96L42 1107 aa19.3■□□□□ 0.68
ARHGEF1-216ENST00000598587 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF1-216ENST00000598587 KIF14Q15058 1648 aa19.28■□□□□ 0.68
ARHGEF1-216ENST00000598587 CD109Q6YHK3 1445 aa19.27■□□□□ 0.68
ARHGEF1-216ENST00000598587 MAGI3Q5TCQ9 1506 aa19.26■□□□□ 0.67
ARHGEF1-216ENST00000598587 CFAP74Q9C0B2 1584 aa19.25■□□□□ 0.67
ARHGEF1-216ENST00000598587 MYO5CQ9NQX4 1742 aa19.24■□□□□ 0.67
ARHGEF1-216ENST00000598587 TTC37Q6PGP7 1564 aa19.23■□□□□ 0.67
ARHGEF1-216ENST00000598587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.22■□□□□ 0.67
ARHGEF1-216ENST00000598587 TROQ12816 1431 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF1-216ENST00000598587 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
ARHGEF1-216ENST00000598587 NEO1Q92859 1461 aa19.15■□□□□ 0.66
ARHGEF1-216ENST00000598587 PHLDB1Q86UU1 1377 aa19.14■□□□□ 0.65
ARHGEF1-216ENST00000598587 EHBP1L1Q8N3D4 1523 aa19.13■□□□□ 0.65
ARHGEF1-216ENST00000598587 ARAP3Q8WWN8 1544 aa19.13■□□□□ 0.65
ARHGEF1-216ENST00000598587 TIAM1Q13009 1591 aa19.12■□□□□ 0.65
ARHGEF1-216ENST00000598587 PREX2Q70Z35 1606 aa19.11■□□□□ 0.65
ARHGEF1-216ENST00000598587 FANCAO15360 1455 aa19.1■□□□□ 0.65
ARHGEF1-216ENST00000598587 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
ARHGEF1-216ENST00000598587 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
ARHGEF1-216ENST00000598587 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.65
ARHGEF1-216ENST00000598587 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.64
ARHGEF1-216ENST00000598587 PLCH2O75038 1416 aa19.08■□□□□ 0.64
ARHGEF1-216ENST00000598587 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.64
ARHGEF1-216ENST00000598587 ARHGAP5Q13017 1502 aa19.06■□□□□ 0.64
ARHGEF1-216ENST00000598587 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
ARHGEF1-216ENST00000598587 RICTORQ6R327 1708 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms