RNA–Protein interactions for RNA: ENST00000597716.1

CAPN12-207, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 2,198 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-207ENST00000597716 TDRD9Q8NDG6 1382 aaKnown RBP29.6■■■□□ 2.33
CAPN12-207ENST00000597716 KANK4Q5T7N3 995 aaPredicted RBP29.6■■■□□ 2.33
CAPN12-207ENST00000597716 RRBP1Q9P2E9 1410 aaKnown RBP29.59■■■□□ 2.33
CAPN12-207ENST00000597716 CFAP43Q8NDM7 1665 aa29.55■■■□□ 2.32
CAPN12-207ENST00000597716 PBRM1Q86U86 1689 aa29.54■■■□□ 2.32
CAPN12-207ENST00000597716 PCF11O94913 1555 aaKnown RBP29.53■■■□□ 2.32
CAPN12-207ENST00000597716 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.327e-8■■■■■ 28.1
CAPN12-207ENST00000597716 WDR62O43379 1518 aa29.51■■■□□ 2.31
CAPN12-207ENST00000597716 HNRNPUL2Q1KMD3 747 aaKnown RBP29.5■■■□□ 2.31
CAPN12-207ENST00000597716 FYCO1Q9BQS8 1478 aa29.49■■■□□ 2.31
CAPN12-207ENST00000597716 SAMD9Q5K651 1589 aa29.48■■■□□ 2.31
CAPN12-207ENST00000597716 LRRC9Q6ZRR7 1453 aa29.45■■■□□ 2.31
CAPN12-207ENST00000597716 FHOD3Q2V2M9 1422 aa29.44■■■□□ 2.3
CAPN12-207ENST00000597716 CASKIN1Q8WXD9 1431 aa29.43■■■□□ 2.3
CAPN12-207ENST00000597716 IFT140Q96RY7 1462 aa29.42■■■□□ 2.3
CAPN12-207ENST00000597716 ADAMTS12P58397 1594 aa29.41■■■□□ 2.3
CAPN12-207ENST00000597716 FMN1Q68DA7 1419 aa29.4■■■□□ 2.3
CAPN12-207ENST00000597716 CCNB3Q8WWL7 1395 aa29.39■■■□□ 2.3
CAPN12-207ENST00000597716 GRIN2BQ13224 1484 aa29.35■■■□□ 2.29
CAPN12-207ENST00000597716 SNAPC4Q5SXM2 1469 aa29.33■■■□□ 2.29
CAPN12-207ENST00000597716 ERCC6Q03468 1493 aa29.32■■■□□ 2.28
CAPN12-207ENST00000597716 P3H3Q8IVL6 736 aa29.29■■■□□ 2.28
CAPN12-207ENST00000597716 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
CAPN12-207ENST00000597716 IQGAP2Q13576 1575 aa29.23■■■□□ 2.27
CAPN12-207ENST00000597716 CLSPNQ9HAW4 1339 aa29.23■■■□□ 2.27
CAPN12-207ENST00000597716 ZNF608Q9ULD9 1512 aaPredicted RBP29.2■■■□□ 2.27
CAPN12-207ENST00000597716 PHLDB1Q86UU1 1377 aa29.2■■■□□ 2.26
CAPN12-207ENST00000597716 EIF4G3O43432 1585 aaKnown RBP29.17■■■□□ 2.26
CAPN12-207ENST00000597716 LRRIQ1Q96JM4 1722 aa29.15■■■□□ 2.26
CAPN12-207ENST00000597716 DHX57Q6P158 1386 aaKnown RBP29.14■■■□□ 2.26
CAPN12-207ENST00000597716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.12■■■□□ 2.255e-6■■■□□ 14.6
CAPN12-207ENST00000597716 UGGT2Q9NYU1 1516 aa29.11■■■□□ 2.25
CAPN12-207ENST00000597716 ATP1B4Q9UN42 357 aaPredicted RBP29.07■■■□□ 2.24
CAPN12-207ENST00000597716 CCDC18Q5T9S5 1454 aa29.06■■■□□ 2.24
CAPN12-207ENST00000597716 HECW1Q76N89 1606 aa29.05■■■□□ 2.24
CAPN12-207ENST00000597716 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
CAPN12-207ENST00000597716 EHBP1L1Q8N3D4 1523 aa29.04■■■□□ 2.24
CAPN12-207ENST00000597716 KIAA0586Q9BVV6 1533 aa29.03■■■□□ 2.24
CAPN12-207ENST00000597716 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
CAPN12-207ENST00000597716 MTUS2Q5JR59 1369 aa28.99■■■□□ 2.23
CAPN12-207ENST00000597716 SUPT6HQ7KZ85 1726 aaKnown RBP28.99■■■□□ 2.23
CAPN12-207ENST00000597716 FGD6Q6ZV73 1430 aa28.96■■■□□ 2.23
CAPN12-207ENST00000597716 SETD5Q9C0A6 1442 aa28.94■■■□□ 2.22
CAPN12-207ENST00000597716 KIAA0556O60303 1618 aa28.94■■■□□ 2.22
CAPN12-207ENST00000597716 RAB3GAP2Q9H2M9 1393 aa28.94■■■□□ 2.22
CAPN12-207ENST00000597716 ARHGEF11O15085 1522 aa28.93■■■□□ 2.22
CAPN12-207ENST00000597716 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
CAPN12-207ENST00000597716 NCOA2Q15596 1464 aa28.91■■■□□ 2.22
CAPN12-207ENST00000597716 ZNF316A6NFI3 1004 aaPredicted RBP28.9■■■□□ 2.22
CAPN12-207ENST00000597716 ITGAEP38570 1179 aa28.89■■■□□ 2.22
CAPN12-207ENST00000597716 FAM50AQ14320 339 aaKnown RBP28.89■■■□□ 2.22
CAPN12-207ENST00000597716 DISP1Q96F81 1524 aa28.89■■■□□ 2.21
CAPN12-207ENST00000597716 EPRSP07814 1512 aaKnown RBP28.88■■■□□ 2.21
CAPN12-207ENST00000597716 MYOM3Q5VTT5 1437 aa28.87■■■□□ 2.21
CAPN12-207ENST00000597716 MAGI3Q5TCQ9 1506 aa28.86■■■□□ 2.21
CAPN12-207ENST00000597716 DIEXFQ68CQ4 756 aaKnown RBP28.83■■■□□ 2.21
CAPN12-207ENST00000597716 CEP170Q5SW79 1584 aa28.82■■■□□ 2.2
CAPN12-207ENST00000597716 MAPKBP1O60336 1514 aa28.8■■■□□ 2.2
CAPN12-207ENST00000597716 NUP160Q12769 1436 aa28.78■■■□□ 2.2
CAPN12-207ENST00000597716 PTPN23Q9H3S7 1636 aa28.76■■■□□ 2.19
CAPN12-207ENST00000597716 RAPGEF6Q8TEU7 1601 aa28.75■■■□□ 2.19
CAPN12-207ENST00000597716 TCOF1Q13428 1488 aaKnown RBP28.74■■■□□ 2.19
CAPN12-207ENST00000597716 CDK13Q14004 1512 aaKnown RBP28.74■■■□□ 2.19
CAPN12-207ENST00000597716 CHMP7Q8WUX9 453 aaPredicted RBP28.72■■■□□ 2.19
CAPN12-207ENST00000597716 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
CAPN12-207ENST00000597716 NUP153P49790 1475 aaKnown RBP28.68■■■□□ 2.18
CAPN12-207ENST00000597716 MIA2Q96PC5 1412 aa28.67■■■□□ 2.18
CAPN12-207ENST00000597716 PTPRKQ15262 1439 aa28.64■■■□□ 2.18
CAPN12-207ENST00000597716 CARMIL2Q6F5E8 1435 aa28.61■■■□□ 2.17
CAPN12-207ENST00000597716 AKNAQ7Z591 1439 aa28.57■■■□□ 2.16
CAPN12-207ENST00000597716 NAIPQ13075 1403 aa28.56■■■□□ 2.16
CAPN12-207ENST00000597716 GCC2Q8IWJ2 1684 aa28.56■■■□□ 2.16
CAPN12-207ENST00000597716 UACAQ9BZF9 1416 aa28.52■■■□□ 2.16
CAPN12-207ENST00000597716 FBLN2P98095 1184 aa28.51■■■□□ 2.15
CAPN12-207ENST00000597716 JPH4Q96JJ6 628 aa28.51■■■□□ 2.15
CAPN12-207ENST00000597716 CDK11AQ9UQ88 783 aaPredicted RBP28.5■■■□□ 2.15
CAPN12-207ENST00000597716 TIMELESSQ9UNS1 1208 aa28.5■■■□□ 2.15
CAPN12-207ENST00000597716 ADCY10Q96PN6 1610 aa28.49■■■□□ 2.15
CAPN12-207ENST00000597716 PLB1Q6P1J6 1458 aa28.47■■■□□ 2.15
CAPN12-207ENST00000597716 TROQ12816 1431 aaPredicted RBP28.47■■■□□ 2.15
CAPN12-207ENST00000597716 ABCA8O94911 1581 aa28.46■■■□□ 2.15
CAPN12-207ENST00000597716 ITSN2Q9NZM3 1697 aa28.43■■■□□ 2.14
CAPN12-207ENST00000597716 DNMT1P26358 1616 aaKnown RBP28.42■■■□□ 2.14
CAPN12-207ENST00000597716 CHD1O14646 1710 aa28.4■■■□□ 2.14
CAPN12-207ENST00000597716 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
CAPN12-207ENST00000597716 ARID3CA6NKF2 412 aa28.38■■■□□ 2.13
CAPN12-207ENST00000597716 ROCK1Q13464 1354 aa28.35■■■□□ 2.13
CAPN12-207ENST00000597716 DAPK1P53355 1430 aa28.34■■■□□ 2.13
CAPN12-207ENST00000597716 PRG4Q92954 1404 aaPredicted RBP28.34■■■□□ 2.13
CAPN12-207ENST00000597716 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
CAPN12-207ENST00000597716 ACIN1Q9UKV3 1341 aaKnown RBP28.32■■■□□ 2.12
CAPN12-207ENST00000597716 SIN3AQ96ST3 1273 aa28.32■■■□□ 2.12
CAPN12-207ENST00000597716 KIF14Q15058 1648 aa28.31■■■□□ 2.12
CAPN12-207ENST00000597716 ABCC5O15440 1437 aa28.28■■■□□ 2.12
CAPN12-207ENST00000597716 GPATCH8Q9UKJ3 1502 aaKnown RBP28.27■■■□□ 2.12
CAPN12-207ENST00000597716 KDM6BO15054 1643 aa28.25■■■□□ 2.11
CAPN12-207ENST00000597716 ATP10BO94823 1461 aa28.25■■■□□ 2.11
CAPN12-207ENST00000597716 CAMSAP2Q08AD1 1489 aa28.25■■■□□ 2.11
CAPN12-207ENST00000597716 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
CAPN12-207ENST00000597716 RRP7BPQ9NSQ0 103 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms