RNA–Protein interactions for RNA: ENST00000597288.1

AC009955.2-201, humanhuman

BASIC

Gene AC009955.2, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009955.2-201ENST00000597288 ARHGEF11O15085 1522 aa11.33□□□□□ -0.6
AC009955.2-201ENST00000597288 CTTNBP2Q8WZ74 1663 aa11.33□□□□□ -0.6
AC009955.2-201ENST00000597288 ZNF608Q9ULD9 1512 aaPredicted RBP11.31□□□□□ -0.6
AC009955.2-201ENST00000597288 HRCP23327 699 aa11.31□□□□□ -0.6
AC009955.2-201ENST00000597288 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
AC009955.2-201ENST00000597288 EHMT2Q96KQ7 1210 aa11.3□□□□□ -0.6
AC009955.2-201ENST00000597288 FHAD1B1AJZ9 1412 aa11.29□□□□□ -0.6
AC009955.2-201ENST00000597288 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
AC009955.2-201ENST00000597288 GRIN2BQ13224 1484 aa11.29□□□□□ -0.6
AC009955.2-201ENST00000597288 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
AC009955.2-201ENST00000597288 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
AC009955.2-201ENST00000597288 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
AC009955.2-201ENST00000597288 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
AC009955.2-201ENST00000597288 CYB5RLQ6IPT4 315 aa11.22□□□□□ -0.61
AC009955.2-201ENST00000597288 MAGI1Q96QZ7 1491 aaPredicted RBP11.22□□□□□ -0.61
AC009955.2-201ENST00000597288 CHD1O14646 1710 aa11.21□□□□□ -0.61
AC009955.2-201ENST00000597288 FYCO1Q9BQS8 1478 aa11.2□□□□□ -0.62
AC009955.2-201ENST00000597288 CASKIN1Q8WXD9 1431 aa11.19□□□□□ -0.62
AC009955.2-201ENST00000597288 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
AC009955.2-201ENST00000597288 TIAM1Q13009 1591 aa11.19□□□□□ -0.62
AC009955.2-201ENST00000597288 UGGT2Q9NYU1 1516 aa11.19□□□□□ -0.62
AC009955.2-201ENST00000597288 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
AC009955.2-201ENST00000597288 ZEB1P37275 1124 aaPredicted RBP11.18□□□□□ -0.62
AC009955.2-201ENST00000597288 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
AC009955.2-201ENST00000597288 RRBP1Q9P2E9 1410 aaKnown RBP11.17□□□□□ -0.62
AC009955.2-201ENST00000597288 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
AC009955.2-201ENST00000597288 KIAA0586Q9BVV6 1533 aa11.16□□□□□ -0.62
AC009955.2-201ENST00000597288 SNAPC4Q5SXM2 1469 aa11.16□□□□□ -0.62
AC009955.2-201ENST00000597288 APLP2Q06481 763 aa11.15□□□□□ -0.62
AC009955.2-201ENST00000597288 SYNJ2O15056 1496 aa11.14□□□□□ -0.63
AC009955.2-201ENST00000597288 GRIN2AQ12879 1464 aa11.14□□□□□ -0.63
AC009955.2-201ENST00000597288 PCF11O94913 1555 aaKnown RBP11.14□□□□□ -0.63
AC009955.2-201ENST00000597288 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
AC009955.2-201ENST00000597288 NUP160Q12769 1436 aa11.12□□□□□ -0.63
AC009955.2-201ENST00000597288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.11□□□□□ -0.63
AC009955.2-201ENST00000597288 FHOD3Q2V2M9 1422 aa11.1□□□□□ -0.63
AC009955.2-201ENST00000597288 FBLN2P98095 1184 aa11.1□□□□□ -0.63
AC009955.2-201ENST00000597288 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
AC009955.2-201ENST00000597288 PPARGC1BQ86YN6 1023 aaKnown RBP11.07□□□□□ -0.64
AC009955.2-201ENST00000597288 CLASP1Q7Z460 1538 aa11.07□□□□□ -0.64
AC009955.2-201ENST00000597288 CCDC18Q5T9S5 1454 aa11.06□□□□□ -0.64
AC009955.2-201ENST00000597288 KIAA0556O60303 1618 aa11.06□□□□□ -0.64
AC009955.2-201ENST00000597288 DISP1Q96F81 1524 aa11.06□□□□□ -0.64
AC009955.2-201ENST00000597288 CEP170Q5SW79 1584 aa11.05□□□□□ -0.64
AC009955.2-201ENST00000597288 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
AC009955.2-201ENST00000597288 HECW1Q76N89 1606 aa11.04□□□□□ -0.64
AC009955.2-201ENST00000597288 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
AC009955.2-201ENST00000597288 EHBP1L1Q8N3D4 1523 aa11.02□□□□□ -0.65
AC009955.2-201ENST00000597288 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
AC009955.2-201ENST00000597288 CLSPNQ9HAW4 1339 aa11.01□□□□□ -0.65
AC009955.2-201ENST00000597288 EPRSP07814 1512 aaKnown RBP10.99□□□□□ -0.65
AC009955.2-201ENST00000597288 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
AC009955.2-201ENST00000597288 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
AC009955.2-201ENST00000597288 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
AC009955.2-201ENST00000597288 SUPT6HQ7KZ85 1726 aaKnown RBP10.97□□□□□ -0.65
AC009955.2-201ENST00000597288 CARMIL2Q6F5E8 1435 aa10.96□□□□□ -0.65
AC009955.2-201ENST00000597288 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
AC009955.2-201ENST00000597288 TCOF1Q13428 1488 aaKnown RBP10.94□□□□□ -0.66
AC009955.2-201ENST00000597288 P3H3Q8IVL6 736 aa10.94□□□□□ -0.66
AC009955.2-201ENST00000597288 MAGI3Q5TCQ9 1506 aa10.94□□□□□ -0.66
AC009955.2-201ENST00000597288 NUP153P49790 1475 aaKnown RBP10.93□□□□□ -0.66
AC009955.2-201ENST00000597288 NCOA2Q15596 1464 aa10.93□□□□□ -0.66
AC009955.2-201ENST00000597288 FGD6Q6ZV73 1430 aa10.93□□□□□ -0.66
AC009955.2-201ENST00000597288 ABCA8O94911 1581 aa10.93□□□□□ -0.66
AC009955.2-201ENST00000597288 MYOM3Q5VTT5 1437 aa10.92□□□□□ -0.66
AC009955.2-201ENST00000597288 MIA2Q96PC5 1412 aa10.92□□□□□ -0.66
AC009955.2-201ENST00000597288 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
AC009955.2-201ENST00000597288 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
AC009955.2-201ENST00000597288 ADCY10Q96PN6 1610 aa10.91□□□□□ -0.66
AC009955.2-201ENST00000597288 AKNAQ7Z591 1439 aa10.9□□□□□ -0.66
AC009955.2-201ENST00000597288 ERCC6L2Q5T890 1561 aa10.9□□□□□ -0.67
AC009955.2-201ENST00000597288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
AC009955.2-201ENST00000597288 CCER1Q8TC90 406 aaPredicted RBP10.89□□□□□ -0.67
AC009955.2-201ENST00000597288 TTBK1Q5TCY1 1321 aaPredicted RBP10.88□□□□□ -0.67
AC009955.2-201ENST00000597288 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
AC009955.2-201ENST00000597288 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
AC009955.2-201ENST00000597288 TROQ12816 1431 aaPredicted RBP10.85□□□□□ -0.67
AC009955.2-201ENST00000597288 SETD5Q9C0A6 1442 aa10.85□□□□□ -0.67
AC009955.2-201ENST00000597288 CDK13Q14004 1512 aaKnown RBP10.85□□□□□ -0.67
AC009955.2-201ENST00000597288 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
AC009955.2-201ENST00000597288 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
AC009955.2-201ENST00000597288 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
AC009955.2-201ENST00000597288 CDK11AQ9UQ88 783 aaPredicted RBP10.84□□□□□ -0.67
AC009955.2-201ENST00000597288 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
AC009955.2-201ENST00000597288 PRG4Q92954 1404 aaPredicted RBP10.83□□□□□ -0.68
AC009955.2-201ENST00000597288 PLB1Q6P1J6 1458 aa10.82□□□□□ -0.68
AC009955.2-201ENST00000597288 FOXD1Q16676 465 aa10.82□□□□□ -0.68
AC009955.2-201ENST00000597288 KIF13AQ9H1H9 1805 aa10.81□□□□□ -0.68
AC009955.2-201ENST00000597288 UHRF1BP1LA0JNW5 1464 aa10.81□□□□□ -0.68
AC009955.2-201ENST00000597288 ITSN2Q9NZM3 1697 aa10.81□□□□□ -0.68
AC009955.2-201ENST00000597288 ATP10BO94823 1461 aa10.81□□□□□ -0.68
AC009955.2-201ENST00000597288 RAB3GAP2Q9H2M9 1393 aa10.8□□□□□ -0.68
AC009955.2-201ENST00000597288 ABCC10Q5T3U5 1492 aa10.8□□□□□ -0.68
AC009955.2-201ENST00000597288 GCC2Q8IWJ2 1684 aa10.79□□□□□ -0.68
AC009955.2-201ENST00000597288 PTPRGP23470 1445 aa10.79□□□□□ -0.68
AC009955.2-201ENST00000597288 PTPRKQ15262 1439 aa10.79□□□□□ -0.68
AC009955.2-201ENST00000597288 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
AC009955.2-201ENST00000597288 DNMT1P26358 1616 aaKnown RBP10.78□□□□□ -0.68
AC009955.2-201ENST00000597288 ATP1B4Q9UN42 357 aaPredicted RBP10.78□□□□□ -0.68
AC009955.2-201ENST00000597288 NAIPQ13075 1403 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms