RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
FARP1-220ENST00000596613 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
FARP1-220ENST00000596613 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
FARP1-220ENST00000596613 SMARCA2P51531 1590 aa15.33■□□□□ 0.05
FARP1-220ENST00000596613 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
FARP1-220ENST00000596613 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
FARP1-220ENST00000596613 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
FARP1-220ENST00000596613 GABBR2O75899 941 aa15.29■□□□□ 0.04
FARP1-220ENST00000596613 CLCN6P51797 869 aa15.29■□□□□ 0.04
FARP1-220ENST00000596613 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
FARP1-220ENST00000596613 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
FARP1-220ENST00000596613 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
FARP1-220ENST00000596613 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
FARP1-220ENST00000596613 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
FARP1-220ENST00000596613 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
FARP1-220ENST00000596613 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
FARP1-220ENST00000596613 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
FARP1-220ENST00000596613 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
FARP1-220ENST00000596613 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
FARP1-220ENST00000596613 MNX1P50219 401 aaPredicted RBP15.08■□□□□ 0
FARP1-220ENST00000596613 PLEKHG5O94827 1062 aa15.07■□□□□ 0
FARP1-220ENST00000596613 WIZO95785 1651 aa15□□□□□ -0.01
FARP1-220ENST00000596613 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
FARP1-220ENST00000596613 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
FARP1-220ENST00000596613 NESP48681 1621 aa14.97□□□□□ -0.01
FARP1-220ENST00000596613 MIER1Q8N108 512 aa14.97□□□□□ -0.01
FARP1-220ENST00000596613 PLCD3Q8N3E9 789 aa14.97□□□□□ -0.01
FARP1-220ENST00000596613 DCBLD2Q96PD2 775 aa14.97□□□□□ -0.01
FARP1-220ENST00000596613 LAMC3Q9Y6N6 1575 aa14.97□□□□□ -0.01
FARP1-220ENST00000596613 CUX2O14529 1486 aa14.96□□□□□ -0.01
FARP1-220ENST00000596613 CADPSQ9ULU8 1353 aa14.95□□□□□ -0.02
FARP1-220ENST00000596613 KLHL34Q8N239 644 aa14.94□□□□□ -0.02
FARP1-220ENST00000596613 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
FARP1-220ENST00000596613 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
FARP1-220ENST00000596613 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
FARP1-220ENST00000596613 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
FARP1-220ENST00000596613 LHX8Q68G74 356 aa14.86□□□□□ -0.03
FARP1-220ENST00000596613 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
FARP1-220ENST00000596613 TOP2AP11388 1531 aaKnown RBP14.86□□□□□ -0.03
FARP1-220ENST00000596613 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
FARP1-220ENST00000596613 PKD2Q13563 968 aa14.81□□□□□ -0.04
FARP1-220ENST00000596613 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
FARP1-220ENST00000596613 CFTRP13569 1480 aa14.76□□□□□ -0.05
FARP1-220ENST00000596613 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
FARP1-220ENST00000596613 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
FARP1-220ENST00000596613 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
FARP1-220ENST00000596613 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
FARP1-220ENST00000596613 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
FARP1-220ENST00000596613 THOC2Q8NI27 1593 aaKnown RBP14.72□□□□□ -0.05
FARP1-220ENST00000596613 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.05
FARP1-220ENST00000596613 MS4A3Q96HJ5 214 aa14.7□□□□□ -0.06
FARP1-220ENST00000596613 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
FARP1-220ENST00000596613 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
FARP1-220ENST00000596613 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
FARP1-220ENST00000596613 KIF12Q96FN5 646 aa14.66□□□□□ -0.06
FARP1-220ENST00000596613 WDR62O43379 1518 aa14.63□□□□□ -0.07
FARP1-220ENST00000596613 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
FARP1-220ENST00000596613 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
FARP1-220ENST00000596613 NUBP1P53384 320 aa14.6□□□□□ -0.07
FARP1-220ENST00000596613 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
FARP1-220ENST00000596613 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
FARP1-220ENST00000596613 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
FARP1-220ENST00000596613 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
FARP1-220ENST00000596613 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
FARP1-220ENST00000596613 MAP3K13O43283 966 aa14.56□□□□□ -0.08
FARP1-220ENST00000596613 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
FARP1-220ENST00000596613 SLC39A7Q92504 469 aa14.55□□□□□ -0.08
FARP1-220ENST00000596613 C7P10643 843 aa14.54□□□□□ -0.08
FARP1-220ENST00000596613 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
FARP1-220ENST00000596613 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.08
FARP1-220ENST00000596613 TIE1P35590 1138 aa14.5□□□□□ -0.09
FARP1-220ENST00000596613 METRNQ9UJH8 293 aa14.49□□□□□ -0.09
FARP1-220ENST00000596613 RGL2O15211 777 aa14.48□□□□□ -0.09
FARP1-220ENST00000596613 GSE1Q14687 1217 aa14.47□□□□□ -0.09
FARP1-220ENST00000596613 PCDHB13Q9Y5F0 798 aa14.47□□□□□ -0.09
FARP1-220ENST00000596613 IFT140Q96RY7 1462 aa14.46□□□□□ -0.09
FARP1-220ENST00000596613 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
FARP1-220ENST00000596613 ATN1P54259 1190 aaPredicted RBP14.45□□□□□ -0.1
FARP1-220ENST00000596613 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
FARP1-220ENST00000596613 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
FARP1-220ENST00000596613 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
FARP1-220ENST00000596613 DNMBPQ6XZF7 1577 aa14.42□□□□□ -0.1
FARP1-220ENST00000596613 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
FARP1-220ENST00000596613 TRPC6Q9Y210 931 aa14.39□□□□□ -0.11
FARP1-220ENST00000596613 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
FARP1-220ENST00000596613 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
FARP1-220ENST00000596613 SOGA1O94964 1423 aa14.36□□□□□ -0.11
FARP1-220ENST00000596613 PLCB2Q00722 1185 aa14.36□□□□□ -0.11
FARP1-220ENST00000596613 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
FARP1-220ENST00000596613 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
FARP1-220ENST00000596613 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
FARP1-220ENST00000596613 IER5LQ5T953 404 aa14.31□□□□□ -0.12
FARP1-220ENST00000596613 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
FARP1-220ENST00000596613 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
FARP1-220ENST00000596613 PYGBP11216 843 aa14.29□□□□□ -0.12
FARP1-220ENST00000596613 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.122e-8■■□□□ 13.4
FARP1-220ENST00000596613 SEC24BO95487 1268 aa14.28□□□□□ -0.12
FARP1-220ENST00000596613 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
FARP1-220ENST00000596613 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.12
FARP1-220ENST00000596613 BBXQ8WY36 941 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms