RNA–Protein interactions for RNA: ENST00000596228.5

LRMDA-212, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 4

Gene LRMDA, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-212ENST00000596228 MNX1P50219 401 aaPredicted RBP8.3□□□□□ -1.08
LRMDA-212ENST00000596228 FAM212AQ96EL1 285 aa8.29□□□□□ -1.08
LRMDA-212ENST00000596228 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
LRMDA-212ENST00000596228 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
LRMDA-212ENST00000596228 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
LRMDA-212ENST00000596228 BCANQ96GW7 911 aa8.27□□□□□ -1.09
LRMDA-212ENST00000596228 KDM2AQ9Y2K7 1162 aa8.27□□□□□ -1.09
LRMDA-212ENST00000596228 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
LRMDA-212ENST00000596228 RIOK3O14730 519 aaKnown RBP8.26□□□□□ -1.09
LRMDA-212ENST00000596228 CHRM1P11229 460 aaPredicted RBP8.25□□□□□ -1.09
LRMDA-212ENST00000596228 RASEFQ8IZ41 740 aa8.24□□□□□ -1.09
LRMDA-212ENST00000596228 TSHZ2Q9NRE2 1034 aa8.24□□□□□ -1.09
LRMDA-212ENST00000596228 DNAJC5Q9H3Z4 198 aa8.23□□□□□ -1.09
LRMDA-212ENST00000596228 VGFO15240 615 aaPredicted RBP8.2□□□□□ -1.1
LRMDA-212ENST00000596228 STK25O00506 426 aa8.17□□□□□ -1.1
LRMDA-212ENST00000596228 PYGBP11216 843 aa8.17□□□□□ -1.1
LRMDA-212ENST00000596228 SGIP1Q9BQI5 828 aa8.16□□□□□ -1.1
LRMDA-212ENST00000596228 NKX1-1Q15270 411 aaPredicted RBP8.15□□□□□ -1.1
LRMDA-212ENST00000596228 CHADLQ6NUI6 762 aa8.15□□□□□ -1.1
LRMDA-212ENST00000596228 GTPBP6O43824 516 aaPredicted RBP8.13□□□□□ -1.11
LRMDA-212ENST00000596228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
LRMDA-212ENST00000596228 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
LRMDA-212ENST00000596228 FARP1Q9Y4F1 1045 aaPredicted RBP8.12□□□□□ -1.11
LRMDA-212ENST00000596228 STK24Q9Y6E0 443 aa8.12□□□□□ -1.11
LRMDA-212ENST00000596228 BCL11BQ9C0K0 894 aaPredicted RBP8.11□□□□□ -1.11
LRMDA-212ENST00000596228 TSPYL2Q9H2G4 693 aaPredicted RBP8.11□□□□□ -1.11
LRMDA-212ENST00000596228 RYDENQ9NUL5 291 aaKnown RBP8.08□□□□□ -1.12
LRMDA-212ENST00000596228 PRKAR2AP13861 404 aaKnown RBP8.07□□□□□ -1.12
LRMDA-212ENST00000596228 ZNF467Q7Z7K2 595 aaPredicted RBP8.07□□□□□ -1.12
LRMDA-212ENST00000596228 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
LRMDA-212ENST00000596228 FXR2P51116 673 aaKnown RBP eCLIP8.05□□□□□ -1.12
LRMDA-212ENST00000596228 PDAP1Q13442 181 aaKnown RBP8.02□□□□□ -1.13
LRMDA-212ENST00000596228 CCDC61Q9Y6R9 512 aa8.02□□□□□ -1.13
LRMDA-212ENST00000596228 NBR1Q14596 966 aa8.01□□□□□ -1.13
LRMDA-212ENST00000596228 TPRNQ4KMQ1 711 aa8.01□□□□□ -1.13
LRMDA-212ENST00000596228 PCDHB8Q9UN66 801 aa8.01□□□□□ -1.13
LRMDA-212ENST00000596228 PCDHB13Q9Y5F0 798 aa8.01□□□□□ -1.13
LRMDA-212ENST00000596228 PAK3O75914 559 aaPredicted RBP8□□□□□ -1.13
LRMDA-212ENST00000596228 ZNF579Q8NAF0 562 aaKnown RBP7.99□□□□□ -1.13
LRMDA-212ENST00000596228 PSEN1P49768 467 aa7.97□□□□□ -1.13
LRMDA-212ENST00000596228 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
LRMDA-212ENST00000596228 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
LRMDA-212ENST00000596228 KIF12Q96FN5 646 aa7.93□□□□□ -1.14
LRMDA-212ENST00000596228 MAP3K13O43283 966 aa7.92□□□□□ -1.14
LRMDA-212ENST00000596228 IFNL1Q8IU54 200 aa7.92□□□□□ -1.14
LRMDA-212ENST00000596228 MFRPQ9BY79 579 aa7.9□□□□□ -1.14
LRMDA-212ENST00000596228 WDR70Q9NW82 654 aa7.89□□□□□ -1.15
LRMDA-212ENST00000596228 ZRANB1Q9UGI0 708 aa7.89□□□□□ -1.15
LRMDA-212ENST00000596228 SOX12O15370 315 aa7.87□□□□□ -1.15
LRMDA-212ENST00000596228 NLRP6P59044 892 aa7.87□□□□□ -1.15
LRMDA-212ENST00000596228 CADPS2Q86UW7 1296 aa7.87□□□□□ -1.15
LRMDA-212ENST00000596228 EFCAB3Q8N7B9 438 aa7.87□□□□□ -1.15
LRMDA-212ENST00000596228 CABP2Q9NPB3 220 aa7.87□□□□□ -1.15
LRMDA-212ENST00000596228 CD44P16070 742 aaKnown RBP7.86□□□□□ -1.15
LRMDA-212ENST00000596228 P3H3Q8IVL6 736 aa7.86□□□□□ -1.15
LRMDA-212ENST00000596228 PPP1R37O75864 691 aa7.83□□□□□ -1.16
LRMDA-212ENST00000596228 FBXO22Q8NEZ5 403 aa7.83□□□□□ -1.16
LRMDA-212ENST00000596228 PHF12Q96QT6 1004 aa7.83□□□□□ -1.16
LRMDA-212ENST00000596228 PHF8Q9UPP1 1060 aa7.83□□□□□ -1.16
LRMDA-212ENST00000596228 GOLGA2Q08379 1002 aa7.79□□□□□ -1.16
LRMDA-212ENST00000596228 KCNV2Q8TDN2 545 aa7.79□□□□□ -1.16
LRMDA-212ENST00000596228 TMEM106CQ9BVX2 250 aa7.77□□□□□ -1.17
LRMDA-212ENST00000596228 C19orf67A6NJJ6 358 aa7.76□□□□□ -1.17
LRMDA-212ENST00000596228 MKRN3Q13064 507 aaKnown RBP7.74□□□□□ -1.17
LRMDA-212ENST00000596228 E2F4Q16254 413 aa7.74□□□□□ -1.17
LRMDA-212ENST00000596228 ARHGEF1Q92888 912 aaKnown RBP7.74□□□□□ -1.17
LRMDA-212ENST00000596228 MS4A3Q96HJ5 214 aa7.74□□□□□ -1.17
LRMDA-212ENST00000596228 PDE4AP27815 886 aa7.73□□□□□ -1.17
LRMDA-212ENST00000596228 MS4A4AQ96JQ5 239 aa7.73□□□□□ -1.17
LRMDA-212ENST00000596228 TRPC6Q9Y210 931 aa7.73□□□□□ -1.17
LRMDA-212ENST00000596228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.71□□□□□ -1.18
LRMDA-212ENST00000596228 LARP6Q9BRS8 491 aaKnown RBP7.71□□□□□ -1.18
LRMDA-212ENST00000596228 TULP1O00294 542 aaPredicted RBP7.7□□□□□ -1.18
LRMDA-212ENST00000596228 TIE1P35590 1138 aa7.7□□□□□ -1.18
LRMDA-212ENST00000596228 NCKAP5LQ9HCH0 1330 aa7.7□□□□□ -1.18
LRMDA-212ENST00000596228 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
LRMDA-212ENST00000596228 TTLL13PA6NNM8 815 aa7.67□□□□□ -1.18
LRMDA-212ENST00000596228 MFSD10Q14728 455 aa7.67□□□□□ -1.18
LRMDA-212ENST00000596228 DDX27Q96GQ7 796 aaKnown RBP7.66□□□□□ -1.18
LRMDA-212ENST00000596228 CRISPLD2Q9H0B8 497 aa7.66□□□□□ -1.18
LRMDA-212ENST00000596228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.66□□□□□ -1.18
LRMDA-212ENST00000596228 BMP2KQ9NSY1 1161 aaPredicted RBP7.64□□□□□ -1.19
LRMDA-212ENST00000596228 SEMA3EO15041 775 aa7.63□□□□□ -1.19
LRMDA-212ENST00000596228 CLCN6P51797 869 aa7.63□□□□□ -1.19
LRMDA-212ENST00000596228 ILDR1Q86SU0 546 aaPredicted RBP7.63□□□□□ -1.19
LRMDA-212ENST00000596228 TESPA1A2RU30 521 aaPredicted RBP7.62□□□□□ -1.19
LRMDA-212ENST00000596228 HAX1O00165 279 aa7.62□□□□□ -1.19
LRMDA-212ENST00000596228 GALR2O43603 387 aaPredicted RBP7.62□□□□□ -1.19
LRMDA-212ENST00000596228 TRIM35Q9UPQ4 493 aa7.62□□□□□ -1.19
LRMDA-212ENST00000596228 CAMK2BQ13554 666 aa7.61□□□□□ -1.19
LRMDA-212ENST00000596228 SMYD5Q6GMV2 418 aa7.61□□□□□ -1.19
LRMDA-212ENST00000596228 ARIH1Q9Y4X5 557 aaPredicted RBP7.61□□□□□ -1.19
LRMDA-212ENST00000596228 GPHNQ9NQX3 736 aaPredicted RBP7.59□□□□□ -1.19
LRMDA-212ENST00000596228 DPY19L2Q6NUT2 758 aa7.58□□□□□ -1.2
LRMDA-212ENST00000596228 PPP1R15BQ5SWA1 713 aa7.57□□□□□ -1.2
LRMDA-212ENST00000596228 ZC3H15Q8WU90 426 aaKnown RBP7.57□□□□□ -1.2
LRMDA-212ENST00000596228 EVX2Q03828 476 aa7.56□□□□□ -1.2
LRMDA-212ENST00000596228 ATN1P54259 1190 aaPredicted RBP7.55□□□□□ -1.2
LRMDA-212ENST00000596228 MICALL2Q8IY33 904 aa7.54□□□□□ -1.2
LRMDA-212ENST00000596228 OCEL1Q9H607 264 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms