RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 ERCC6L2Q5T890 1561 aa32.56■■■□□ 2.8
LTBP4-208ENST00000593738 KIAA0586Q9BVV6 1533 aa32.51■■■□□ 2.79
LTBP4-208ENST00000593738 PRG4Q92954 1404 aaPredicted RBP32.5■■■□□ 2.79
LTBP4-208ENST00000593738 RAPGEF2Q9Y4G8 1499 aa32.35■■■□□ 2.77
LTBP4-208ENST00000593738 TRHP20396 242 aaPredicted RBP32.34■■■□□ 2.77
LTBP4-208ENST00000593738 IQGAP2Q13576 1575 aa32.25■■■□□ 2.75
LTBP4-208ENST00000593738 CARMIL2Q6F5E8 1435 aa32.18■■■□□ 2.74
LTBP4-208ENST00000593738 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
LTBP4-208ENST00000593738 PTPRGP23470 1445 aa32.09■■■□□ 2.73
LTBP4-208ENST00000593738 TNIKQ9UKE5 1360 aa32.08■■■□□ 2.73
LTBP4-208ENST00000593738 UGGT2Q9NYU1 1516 aa32.08■■■□□ 2.73
LTBP4-208ENST00000593738 CTTNBP2Q8WZ74 1663 aa32.08■■■□□ 2.73
LTBP4-208ENST00000593738 CSRNP3Q8WYN3 585 aa32.07■■■□□ 2.72
LTBP4-208ENST00000593738 EEA1Q15075 1411 aa32.07■■■□□ 2.72
LTBP4-208ENST00000593738 NPM1P06748 294 aaKnown RBP eCLIP32.06■■■□□ 2.72
LTBP4-208ENST00000593738 DISP1Q96F81 1524 aa32.03■■■□□ 2.72
LTBP4-208ENST00000593738 ADCY10Q96PN6 1610 aa32.03■■■□□ 2.72
LTBP4-208ENST00000593738 KIAA0556O60303 1618 aa31.93■■■□□ 2.7
LTBP4-208ENST00000593738 CHIC1Q5VXU3 224 aa31.93■■■□□ 2.7
LTBP4-208ENST00000593738 MAPKBP1O60336 1514 aa31.93■■■□□ 2.7
LTBP4-208ENST00000593738 TTBK1Q5TCY1 1321 aaPredicted RBP31.93■■■□□ 2.7
LTBP4-208ENST00000593738 GOLGA3Q08378 1498 aa31.91■■■□□ 2.7
LTBP4-208ENST00000593738 UHRF1BP1LA0JNW5 1464 aa31.87■■■□□ 2.69
LTBP4-208ENST00000593738 KIF13AQ9H1H9 1805 aa31.86■■■□□ 2.69
LTBP4-208ENST00000593738 UACAQ9BZF9 1416 aa31.85■■■□□ 2.69
LTBP4-208ENST00000593738 ABCC2Q92887 1545 aa31.84■■■□□ 2.69
LTBP4-208ENST00000593738 ABCC10Q5T3U5 1492 aa31.82■■■□□ 2.68
LTBP4-208ENST00000593738 FAM9AQ8IZU1 332 aaPredicted RBP31.8■■■□□ 2.68
LTBP4-208ENST00000593738 FAM69CQ0P6D2 419 aa31.76■■■□□ 2.67
LTBP4-208ENST00000593738 DIP2BQ9P265 1576 aa31.73■■■□□ 2.67
LTBP4-208ENST00000593738 KIF21BO75037 1637 aa31.73■■■□□ 2.67
LTBP4-208ENST00000593738 KDM5BQ9UGL1 1544 aa31.7■■■□□ 2.67
LTBP4-208ENST00000593738 PLB1Q6P1J6 1458 aa31.68■■■□□ 2.66
LTBP4-208ENST00000593738 ASXL2Q76L83 1435 aa31.65■■■□□ 2.66
LTBP4-208ENST00000593738 SAMD9Q5K651 1589 aa31.63■■■□□ 2.65
LTBP4-208ENST00000593738 ABCA8O94911 1581 aa31.62■■■□□ 2.65
LTBP4-208ENST00000593738 ZCCHC11Q5TAX3 1644 aaKnown RBP31.62■■■□□ 2.65
LTBP4-208ENST00000593738 P3H3Q8IVL6 736 aa31.58■■■□□ 2.65
LTBP4-208ENST00000593738 GLI2P10070 1586 aa31.56■■■□□ 2.64
LTBP4-208ENST00000593738 TSPOAP1O95153 1857 aa31.48■■■□□ 2.63
LTBP4-208ENST00000593738 EPRSP07814 1512 aaKnown RBP31.47■■■□□ 2.63
LTBP4-208ENST00000593738 UBTFP17480 764 aaKnown RBP31.46■■■□□ 2.63
LTBP4-208ENST00000593738 EFCAB5A4FU69 1503 aa31.45■■■□□ 2.63
LTBP4-208ENST00000593738 RANGAP1P46060 587 aaPredicted RBP31.45■■■□□ 2.63
LTBP4-208ENST00000593738 WDR7Q9Y4E6 1490 aa31.45■■■□□ 2.62
LTBP4-208ENST00000593738 RAPGEF6Q8TEU7 1601 aa31.4■■■□□ 2.62
LTBP4-208ENST00000593738 FHOD3Q2V2M9 1422 aa31.38■■■□□ 2.61
LTBP4-208ENST00000593738 MAP3K4Q9Y6R4 1608 aa31.37■■■□□ 2.61
LTBP4-208ENST00000593738 ATP10BO94823 1461 aa31.36■■■□□ 2.61
LTBP4-208ENST00000593738 EHMT2Q96KQ7 1210 aa31.36■■■□□ 2.61
LTBP4-208ENST00000593738 PPRC1Q5VV67 1664 aaKnown RBP31.34■■■□□ 2.61
LTBP4-208ENST00000593738 KDM6BO15054 1643 aa31.33■■■□□ 2.61
LTBP4-208ENST00000593738 KCNH8Q96L42 1107 aa31.28■■■□□ 2.6
LTBP4-208ENST00000593738 TEX14Q8IWB6 1497 aa31.27■■■□□ 2.6
LTBP4-208ENST00000593738 ARID3CA6NKF2 412 aa31.26■■■□□ 2.59
LTBP4-208ENST00000593738 NUP153P49790 1475 aaKnown RBP31.26■■■□□ 2.59
LTBP4-208ENST00000593738 CFAP43Q8NDM7 1665 aa31.25■■■□□ 2.59
LTBP4-208ENST00000593738 CD109Q6YHK3 1445 aa31.21■■■□□ 2.59
LTBP4-208ENST00000593738 ARHGAP35Q9NRY4 1499 aa31.21■■■□□ 2.59
LTBP4-208ENST00000593738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.2■■■□□ 2.59
LTBP4-208ENST00000593738 HNRNPUL2Q1KMD3 747 aaKnown RBP31.2■■■□□ 2.59
LTBP4-208ENST00000593738 MAGI3Q5TCQ9 1506 aa31.18■■■□□ 2.58
LTBP4-208ENST00000593738 FMN1Q68DA7 1419 aa31.17■■■□□ 2.58
LTBP4-208ENST00000593738 ABCA9Q8IUA7 1624 aa31.1■■■□□ 2.57
LTBP4-208ENST00000593738 PLEKHD1A6NEE1 506 aa31.1■■■□□ 2.57
LTBP4-208ENST00000593738 COL17A1Q9UMD9 1497 aaPredicted RBP31.06■■■□□ 2.56
LTBP4-208ENST00000593738 HECW1Q76N89 1606 aa31.04■■■□□ 2.56
LTBP4-208ENST00000593738 ATP1B4Q9UN42 357 aaPredicted RBP30.99■■■□□ 2.55
LTBP4-208ENST00000593738 PHLDB1Q86UU1 1377 aa30.98■■■□□ 2.55
LTBP4-208ENST00000593738 AEBP2Q6ZN18 517 aaPredicted RBP30.98■■■□□ 2.55
LTBP4-208ENST00000593738 CDK13Q14004 1512 aaKnown RBP30.98■■■□□ 2.55
LTBP4-208ENST00000593738 CDK11AQ9UQ88 783 aaPredicted RBP30.93■■■□□ 2.54
LTBP4-208ENST00000593738 ARAP3Q8WWN8 1544 aa30.93■■■□□ 2.54
LTBP4-208ENST00000593738 CLIP1P30622 1438 aa30.91■■■□□ 2.54
LTBP4-208ENST00000593738 NEO1Q92859 1461 aa30.9■■■□□ 2.54
LTBP4-208ENST00000593738 CASKIN1Q8WXD9 1431 aa30.88■■■□□ 2.53
LTBP4-208ENST00000593738 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.88■■■□□ 2.536e-7■■■■□ 19.9
LTBP4-208ENST00000593738 LRRIQ1Q96JM4 1722 aa30.83■■■□□ 2.53
LTBP4-208ENST00000593738 PCF11O94913 1555 aaKnown RBP30.82■■■□□ 2.52
LTBP4-208ENST00000593738 CCDC18Q5T9S5 1454 aa30.81■■■□□ 2.52
LTBP4-208ENST00000593738 TTC37Q6PGP7 1564 aa30.8■■■□□ 2.52
LTBP4-208ENST00000593738 CFAP74Q9C0B2 1584 aa30.79■■■□□ 2.52
LTBP4-208ENST00000593738 FYCO1Q9BQS8 1478 aa30.78■■■□□ 2.52
LTBP4-208ENST00000593738 TROQ12816 1431 aaPredicted RBP30.78■■■□□ 2.52
LTBP4-208ENST00000593738 FANCAO15360 1455 aa30.75■■■□□ 2.51
LTBP4-208ENST00000593738 KDM4FA0A1W2PPD8 638 aa30.74■■■□□ 2.51
LTBP4-208ENST00000593738 KIF14Q15058 1648 aa30.73■■■□□ 2.51
LTBP4-208ENST00000593738 PLCH2O75038 1416 aa30.73■■■□□ 2.51
LTBP4-208ENST00000593738 AKNAQ7Z591 1439 aa30.73■■■□□ 2.51
LTBP4-208ENST00000593738 RAPGEF3O95398 923 aa30.69■■■□□ 2.5
LTBP4-208ENST00000593738 MYO5CQ9NQX4 1742 aa30.68■■■□□ 2.5
LTBP4-208ENST00000593738 CEP162Q5TB80 1403 aa30.68■■■□□ 2.5
LTBP4-208ENST00000593738 DENND4BO75064 1496 aaPredicted RBP30.66■■■□□ 2.5
LTBP4-208ENST00000593738 ADGRL1O94910 1474 aa30.63■■■□□ 2.49
LTBP4-208ENST00000593738 FRMPD1Q5SYB0 1578 aa30.63■■■□□ 2.49
LTBP4-208ENST00000593738 EFCAB2Q5VUJ9 269 aa30.63■■■□□ 2.49
LTBP4-208ENST00000593738 RICTORQ6R327 1708 aa30.61■■■□□ 2.49
LTBP4-208ENST00000593738 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
LTBP4-208ENST00000593738 SCAPERQ9BY12 1400 aa30.54■■■□□ 2.48
LTBP4-208ENST00000593738 ARHGAP5Q13017 1502 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms