RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
CAPN12-202ENST00000593700 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
CAPN12-202ENST00000593700 IGF1RP08069 1367 aa23.72■■□□□ 1.39
CAPN12-202ENST00000593700 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
CAPN12-202ENST00000593700 FBLN2P98095 1184 aa23.71■■□□□ 1.39
CAPN12-202ENST00000593700 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
CAPN12-202ENST00000593700 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
CAPN12-202ENST00000593700 CTTNBP2Q8WZ74 1663 aa23.65■■□□□ 1.38
CAPN12-202ENST00000593700 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
CAPN12-202ENST00000593700 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
CAPN12-202ENST00000593700 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
CAPN12-202ENST00000593700 UBTFP17480 764 aaKnown RBP23.58■■□□□ 1.37
CAPN12-202ENST00000593700 NUP160Q12769 1436 aa23.52■■□□□ 1.36
CAPN12-202ENST00000593700 CLASP1Q7Z460 1538 aa23.52■■□□□ 1.36
CAPN12-202ENST00000593700 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
CAPN12-202ENST00000593700 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
CAPN12-202ENST00000593700 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
CAPN12-202ENST00000593700 IQGAP2Q13576 1575 aa23.37■■□□□ 1.33
CAPN12-202ENST00000593700 KIAA0586Q9BVV6 1533 aa23.37■■□□□ 1.33
CAPN12-202ENST00000593700 CLIP1P30622 1438 aa23.36■■□□□ 1.33
CAPN12-202ENST00000593700 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
CAPN12-202ENST00000593700 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
CAPN12-202ENST00000593700 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
CAPN12-202ENST00000593700 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
CAPN12-202ENST00000593700 EFCAB5A4FU69 1503 aa23.33■■□□□ 1.33
CAPN12-202ENST00000593700 SHROOM2Q13796 1616 aa23.33■■□□□ 1.32
CAPN12-202ENST00000593700 SLC4A1APQ9BWU0 796 aaKnown RBP23.29■■□□□ 1.32
CAPN12-202ENST00000593700 JPH4Q96JJ6 628 aa23.27■■□□□ 1.32
CAPN12-202ENST00000593700 SAMD9Q5K651 1589 aa23.24■■□□□ 1.31
CAPN12-202ENST00000593700 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.3
CAPN12-202ENST00000593700 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
CAPN12-202ENST00000593700 UGGT2Q9NYU1 1516 aa23.19■■□□□ 1.3
CAPN12-202ENST00000593700 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
CAPN12-202ENST00000593700 RANGAP1P46060 587 aaPredicted RBP23.17■■□□□ 1.3
CAPN12-202ENST00000593700 CARMIL2Q6F5E8 1435 aa23.16■■□□□ 1.3
CAPN12-202ENST00000593700 VPS8Q8N3P4 1428 aa23.15■■□□□ 1.3
CAPN12-202ENST00000593700 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
CAPN12-202ENST00000593700 CYB5RLQ6IPT4 315 aa23.1■■□□□ 1.29
CAPN12-202ENST00000593700 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
CAPN12-202ENST00000593700 NPM3O75607 178 aaKnown RBP23.06■■□□□ 1.28
CAPN12-202ENST00000593700 FHOD3Q2V2M9 1422 aa23.04■■□□□ 1.28
CAPN12-202ENST00000593700 FMN1Q68DA7 1419 aa23.04■■□□□ 1.28
CAPN12-202ENST00000593700 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
CAPN12-202ENST00000593700 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
CAPN12-202ENST00000593700 PTPRGP23470 1445 aa22.98■■□□□ 1.27
CAPN12-202ENST00000593700 FYCO1Q9BQS8 1478 aa22.97■■□□□ 1.27
CAPN12-202ENST00000593700 CFAP43Q8NDM7 1665 aa22.94■■□□□ 1.26
CAPN12-202ENST00000593700 HECW1Q76N89 1606 aa22.94■■□□□ 1.26
CAPN12-202ENST00000593700 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
CAPN12-202ENST00000593700 APLP2Q06481 763 aa22.92■■□□□ 1.26
CAPN12-202ENST00000593700 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
CAPN12-202ENST00000593700 RAPGEF6Q8TEU7 1601 aa22.88■■□□□ 1.25
CAPN12-202ENST00000593700 MSH5O43196 834 aa22.87■■□□□ 1.25
CAPN12-202ENST00000593700 MAP3K1Q13233 1512 aa22.87■■□□□ 1.25
CAPN12-202ENST00000593700 UHRF1BP1LA0JNW5 1464 aa22.85■■□□□ 1.25
CAPN12-202ENST00000593700 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
CAPN12-202ENST00000593700 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
CAPN12-202ENST00000593700 UACAQ9BZF9 1416 aa22.83■■□□□ 1.25
CAPN12-202ENST00000593700 LRRIQ1Q96JM4 1722 aa22.83■■□□□ 1.25
CAPN12-202ENST00000593700 NPM1P06748 294 aaKnown RBP eCLIP22.83■■□□□ 1.25
CAPN12-202ENST00000593700 CNKSR2Q8WXI2 1034 aa22.83■■□□□ 1.25
CAPN12-202ENST00000593700 CCDC18Q5T9S5 1454 aa22.83■■□□□ 1.25
CAPN12-202ENST00000593700 ADCY10Q96PN6 1610 aa22.8■■□□□ 1.24
CAPN12-202ENST00000593700 ABCC2Q92887 1545 aa22.79■■□□□ 1.24
CAPN12-202ENST00000593700 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
CAPN12-202ENST00000593700 ABCA8O94911 1581 aa22.76■■□□□ 1.23
CAPN12-202ENST00000593700 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
CAPN12-202ENST00000593700 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
CAPN12-202ENST00000593700 EPRSP07814 1512 aaKnown RBP22.7■■□□□ 1.22
CAPN12-202ENST00000593700 KDM5BQ9UGL1 1544 aa22.69■■□□□ 1.22
CAPN12-202ENST00000593700 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
CAPN12-202ENST00000593700 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
CAPN12-202ENST00000593700 NUP153P49790 1475 aaKnown RBP22.67■■□□□ 1.22
CAPN12-202ENST00000593700 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
CAPN12-202ENST00000593700 SUPT6HQ7KZ85 1726 aaKnown RBP22.65■■□□□ 1.22
CAPN12-202ENST00000593700 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
CAPN12-202ENST00000593700 TRHP20396 242 aaPredicted RBP22.61■■□□□ 1.21
CAPN12-202ENST00000593700 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
CAPN12-202ENST00000593700 MTUS2Q5JR59 1369 aa22.6■■□□□ 1.21
CAPN12-202ENST00000593700 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
CAPN12-202ENST00000593700 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
CAPN12-202ENST00000593700 ABCC10Q5T3U5 1492 aa22.56■■□□□ 1.2
CAPN12-202ENST00000593700 CDK11AQ9UQ88 783 aaPredicted RBP22.55■■□□□ 1.2
CAPN12-202ENST00000593700 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
CAPN12-202ENST00000593700 ATP10BO94823 1461 aa22.52■■□□□ 1.2
CAPN12-202ENST00000593700 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
CAPN12-202ENST00000593700 KANK4Q5T7N3 995 aaPredicted RBP22.51■■□□□ 1.19
CAPN12-202ENST00000593700 DIP2BQ9P265 1576 aa22.5■■□□□ 1.19
CAPN12-202ENST00000593700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
CAPN12-202ENST00000593700 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
CAPN12-202ENST00000593700 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
CAPN12-202ENST00000593700 KIF14Q15058 1648 aa22.49■■□□□ 1.19
CAPN12-202ENST00000593700 ITSN2Q9NZM3 1697 aa22.48■■□□□ 1.19
CAPN12-202ENST00000593700 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
CAPN12-202ENST00000593700 GLI2P10070 1586 aa22.47■■□□□ 1.19
CAPN12-202ENST00000593700 MAPK8IP2Q13387 824 aaPredicted RBP22.47■■□□□ 1.19
CAPN12-202ENST00000593700 TROQ12816 1431 aaPredicted RBP22.47■■□□□ 1.19
CAPN12-202ENST00000593700 FAM69CQ0P6D2 419 aa22.46■■□□□ 1.19
CAPN12-202ENST00000593700 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
CAPN12-202ENST00000593700 NCOA2Q15596 1464 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms