RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
ARHGEF1-205ENST00000593609 CTTNBP2Q8WZ74 1663 aa30.68■■■□□ 2.5
ARHGEF1-205ENST00000593609 IQGAP2Q13576 1575 aa30.66■■■□□ 2.5
ARHGEF1-205ENST00000593609 EHMT2Q96KQ7 1210 aa30.64■■■□□ 2.5
ARHGEF1-205ENST00000593609 TNIKQ9UKE5 1360 aa30.64■■■□□ 2.5
ARHGEF1-205ENST00000593609 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
ARHGEF1-205ENST00000593609 SHROOM2Q13796 1616 aa30.57■■■□□ 2.48
ARHGEF1-205ENST00000593609 JPH4Q96JJ6 628 aa30.55■■■□□ 2.48
ARHGEF1-205ENST00000593609 UGGT2Q9NYU1 1516 aa30.54■■■□□ 2.48
ARHGEF1-205ENST00000593609 PRG4Q92954 1404 aaPredicted RBP30.44■■■□□ 2.46
ARHGEF1-205ENST00000593609 CARMIL2Q6F5E8 1435 aa30.42■■■□□ 2.46
ARHGEF1-205ENST00000593609 EFCAB5A4FU69 1503 aa30.41■■■□□ 2.46
ARHGEF1-205ENST00000593609 DISP1Q96F81 1524 aa30.39■■■□□ 2.46
ARHGEF1-205ENST00000593609 SAMD9Q5K651 1589 aa30.38■■■□□ 2.45
ARHGEF1-205ENST00000593609 CEP162Q5TB80 1403 aa30.36■■■□□ 2.45
ARHGEF1-205ENST00000593609 CLIP1P30622 1438 aa30.35■■■□□ 2.45
ARHGEF1-205ENST00000593609 KIAA0556O60303 1618 aa30.35■■■□□ 2.45
ARHGEF1-205ENST00000593609 ARHGEF11O15085 1522 aa30.32■■■□□ 2.44
ARHGEF1-205ENST00000593609 ERCC6L2Q5T890 1561 aa30.3■■■□□ 2.44
ARHGEF1-205ENST00000593609 ARHGAP35Q9NRY4 1499 aa30.3■■■□□ 2.44
ARHGEF1-205ENST00000593609 RANGAP1P46060 587 aaPredicted RBP30.29■■■□□ 2.44
ARHGEF1-205ENST00000593609 DNAJC5Q9H3Z4 198 aa30.29■■■□□ 2.44
ARHGEF1-205ENST00000593609 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
ARHGEF1-205ENST00000593609 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
ARHGEF1-205ENST00000593609 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
ARHGEF1-205ENST00000593609 P3H3Q8IVL6 736 aa30.18■■■□□ 2.42
ARHGEF1-205ENST00000593609 PTPRGP23470 1445 aa30.18■■■□□ 2.42
ARHGEF1-205ENST00000593609 FHOD3Q2V2M9 1422 aa30.18■■■□□ 2.42
ARHGEF1-205ENST00000593609 ARAP1Q96P48 1450 aa30.16■■■□□ 2.42
ARHGEF1-205ENST00000593609 FMN1Q68DA7 1419 aa30.12■■■□□ 2.41
ARHGEF1-205ENST00000593609 TTBK1Q5TCY1 1321 aaPredicted RBP30■■■□□ 2.39
ARHGEF1-205ENST00000593609 UACAQ9BZF9 1416 aa30■■■□□ 2.39
ARHGEF1-205ENST00000593609 ABCA8O94911 1581 aa29.99■■■□□ 2.39
ARHGEF1-205ENST00000593609 UHRF1BP1LA0JNW5 1464 aa29.98■■■□□ 2.39
ARHGEF1-205ENST00000593609 PLB1Q6P1J6 1458 aa29.97■■■□□ 2.39
ARHGEF1-205ENST00000593609 VPS8Q8N3P4 1428 aa29.96■■■□□ 2.39
ARHGEF1-205ENST00000593609 CYB5RLQ6IPT4 315 aa29.96■■■□□ 2.39
ARHGEF1-205ENST00000593609 CASKIN1Q8WXD9 1431 aa29.95■■■□□ 2.38
ARHGEF1-205ENST00000593609 ABCC2Q92887 1545 aa29.94■■■□□ 2.38
ARHGEF1-205ENST00000593609 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
ARHGEF1-205ENST00000593609 FYCO1Q9BQS8 1478 aa29.91■■■□□ 2.38
ARHGEF1-205ENST00000593609 PCF11O94913 1555 aaKnown RBP29.88■■■□□ 2.37
ARHGEF1-205ENST00000593609 HECW1Q76N89 1606 aa29.86■■■□□ 2.37
ARHGEF1-205ENST00000593609 ADCY10Q96PN6 1610 aa29.86■■■□□ 2.37
ARHGEF1-205ENST00000593609 NUP153P49790 1475 aaKnown RBP29.86■■■□□ 2.37
ARHGEF1-205ENST00000593609 KDM5BQ9UGL1 1544 aa29.81■■■□□ 2.36
ARHGEF1-205ENST00000593609 EPRSP07814 1512 aaKnown RBP29.76■■■□□ 2.36
ARHGEF1-205ENST00000593609 CCDC18Q5T9S5 1454 aa29.76■■■□□ 2.35
ARHGEF1-205ENST00000593609 ATP1B4Q9UN42 357 aaPredicted RBP29.74■■■□□ 2.35
ARHGEF1-205ENST00000593609 ATP10BO94823 1461 aa29.74■■■□□ 2.35
ARHGEF1-205ENST00000593609 NPM1P06748 294 aaKnown RBP eCLIP29.73■■■□□ 2.35
ARHGEF1-205ENST00000593609 ZCCHC11Q5TAX3 1644 aaKnown RBP29.68■■■□□ 2.34
ARHGEF1-205ENST00000593609 MAP3K1Q13233 1512 aa29.68■■■□□ 2.34
ARHGEF1-205ENST00000593609 CDK13Q14004 1512 aaKnown RBP29.66■■■□□ 2.34
ARHGEF1-205ENST00000593609 LRRIQ1Q96JM4 1722 aa29.64■■■□□ 2.34
ARHGEF1-205ENST00000593609 ARID3CA6NKF2 412 aa29.63■■■□□ 2.33
ARHGEF1-205ENST00000593609 MAPKBP1O60336 1514 aa29.62■■■□□ 2.33
ARHGEF1-205ENST00000593609 CDK11AQ9UQ88 783 aaPredicted RBP29.62■■■□□ 2.33
ARHGEF1-205ENST00000593609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.61■■■□□ 2.33
ARHGEF1-205ENST00000593609 HNRNPUL2Q1KMD3 747 aaKnown RBP29.61■■■□□ 2.33
ARHGEF1-205ENST00000593609 APLP2Q06481 763 aa29.6■■■□□ 2.33
ARHGEF1-205ENST00000593609 TIAM1Q13009 1591 aa29.6■■■□□ 2.33
ARHGEF1-205ENST00000593609 CFAP43Q8NDM7 1665 aa29.6■■■□□ 2.33
ARHGEF1-205ENST00000593609 ASXL2Q76L83 1435 aa29.56■■■□□ 2.32
ARHGEF1-205ENST00000593609 PLEKHD1A6NEE1 506 aa29.54■■■□□ 2.32
ARHGEF1-205ENST00000593609 WDR7Q9Y4E6 1490 aa29.53■■■□□ 2.32
ARHGEF1-205ENST00000593609 TROQ12816 1431 aaPredicted RBP29.51■■■□□ 2.31
ARHGEF1-205ENST00000593609 MTUS2Q5JR59 1369 aa29.48■■■□□ 2.31
ARHGEF1-205ENST00000593609 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
ARHGEF1-205ENST00000593609 EHBP1L1Q8N3D4 1523 aa29.47■■■□□ 2.31
ARHGEF1-205ENST00000593609 MAGI3Q5TCQ9 1506 aa29.46■■■□□ 2.31
ARHGEF1-205ENST00000593609 KANK4Q5T7N3 995 aaPredicted RBP29.39■■■□□ 2.3
ARHGEF1-205ENST00000593609 ABCC10Q5T3U5 1492 aa29.38■■■□□ 2.29
ARHGEF1-205ENST00000593609 KIF14Q15058 1648 aa29.37■■■□□ 2.29
ARHGEF1-205ENST00000593609 GLI2P10070 1586 aa29.35■■■□□ 2.29
ARHGEF1-205ENST00000593609 KCNH8Q96L42 1107 aa29.33■■■□□ 2.29
ARHGEF1-205ENST00000593609 DIP2BQ9P265 1576 aa29.33■■■□□ 2.29
ARHGEF1-205ENST00000593609 SUPT6HQ7KZ85 1726 aaKnown RBP29.3■■■□□ 2.28
ARHGEF1-205ENST00000593609 ABCA9Q8IUA7 1624 aa29.29■■■□□ 2.28
ARHGEF1-205ENST00000593609 NCOA2Q15596 1464 aa29.28■■■□□ 2.28
ARHGEF1-205ENST00000593609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.27■■■□□ 2.28
ARHGEF1-205ENST00000593609 FAM69CQ0P6D2 419 aa29.25■■■□□ 2.27
ARHGEF1-205ENST00000593609 TTC37Q6PGP7 1564 aa29.22■■■□□ 2.27
ARHGEF1-205ENST00000593609 CCNB3Q8WWL7 1395 aa29.19■■■□□ 2.26
ARHGEF1-205ENST00000593609 KIF13AQ9H1H9 1805 aa29.18■■■□□ 2.26
ARHGEF1-205ENST00000593609 MAP3K4Q9Y6R4 1608 aa29.18■■■□□ 2.26
ARHGEF1-205ENST00000593609 CD109Q6YHK3 1445 aa29.18■■■□□ 2.26
ARHGEF1-205ENST00000593609 ARAP3Q8WWN8 1544 aa29.17■■■□□ 2.26
ARHGEF1-205ENST00000593609 PLCH2O75038 1416 aa29.15■■■□□ 2.26
ARHGEF1-205ENST00000593609 GPATCH8Q9UKJ3 1502 aaKnown RBP29.15■■■□□ 2.26
ARHGEF1-205ENST00000593609 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.26
ARHGEF1-205ENST00000593609 MYOM3Q5VTT5 1437 aa29.12■■■□□ 2.25
ARHGEF1-205ENST00000593609 MYO5CQ9NQX4 1742 aa29.12■■■□□ 2.25
ARHGEF1-205ENST00000593609 TRHP20396 242 aaPredicted RBP29.12■■■□□ 2.25
ARHGEF1-205ENST00000593609 PREX2Q70Z35 1606 aa29.11■■■□□ 2.25
ARHGEF1-205ENST00000593609 ITSN2Q9NZM3 1697 aa29.11■■■□□ 2.25
ARHGEF1-205ENST00000593609 PHLDB1Q86UU1 1377 aa29.11■■■□□ 2.25
ARHGEF1-205ENST00000593609 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
ARHGEF1-205ENST00000593609 MIA2Q96PC5 1412 aa29.07■■■□□ 2.24
ARHGEF1-205ENST00000593609 TEX14Q8IWB6 1497 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms