RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 RUSC2Q8N2Y8 1516 aa38.04■■■■□ 3.68
PTPN2-215ENST00000592776 CUL7Q14999 1698 aa37.99■■■■□ 3.67
PTPN2-215ENST00000592776 CARMIL1Q5VZK9 1371 aa37.94■■■■□ 3.66
PTPN2-215ENST00000592776 KIAA0586Q9BVV6 1533 aa37.89■■■■□ 3.66
PTPN2-215ENST00000592776 TTBK1Q5TCY1 1321 aaPredicted RBP37.61■■■■□ 3.61
PTPN2-215ENST00000592776 RAPGEF2Q9Y4G8 1499 aa37.59■■■■□ 3.61
PTPN2-215ENST00000592776 ADCY10Q96PN6 1610 aa37.58■■■■□ 3.61
PTPN2-215ENST00000592776 IQGAP2Q13576 1575 aa37.56■■■■□ 3.6
PTPN2-215ENST00000592776 NPM1P06748 294 aaKnown RBP eCLIP37.54■■■■□ 3.6
PTPN2-215ENST00000592776 PTPRGP23470 1445 aa37.52■■■■□ 3.6
PTPN2-215ENST00000592776 CARMIL2Q6F5E8 1435 aa37.49■■■■□ 3.59
PTPN2-215ENST00000592776 KIF13AQ9H1H9 1805 aa37.48■■■■□ 3.59
PTPN2-215ENST00000592776 TNIKQ9UKE5 1360 aa37.45■■■■□ 3.59
PTPN2-215ENST00000592776 DISP1Q96F81 1524 aa37.41■■■■□ 3.58
PTPN2-215ENST00000592776 FAM69CQ0P6D2 419 aa37.41■■■■□ 3.58
PTPN2-215ENST00000592776 MAPKBP1O60336 1514 aa37.39■■■■□ 3.58
PTPN2-215ENST00000592776 ABCC10Q5T3U5 1492 aa37.37■■■■□ 3.57
PTPN2-215ENST00000592776 UGGT2Q9NYU1 1516 aa37.35■■■■□ 3.57
PTPN2-215ENST00000592776 PRXQ9BXM0 1461 aa37.31■■■■□ 3.56
PTPN2-215ENST00000592776 DIP2BQ9P265 1576 aa37.29■■■■□ 3.56
PTPN2-215ENST00000592776 KIAA0556O60303 1618 aa37.24■■■■□ 3.55
PTPN2-215ENST00000592776 CTTNBP2Q8WZ74 1663 aa37.23■■■■□ 3.55
PTPN2-215ENST00000592776 ABCC2Q92887 1545 aa37.23■■■■□ 3.55
PTPN2-215ENST00000592776 UACAQ9BZF9 1416 aa37.23■■■■□ 3.55
PTPN2-215ENST00000592776 UHRF1BP1LA0JNW5 1464 aa37.19■■■■□ 3.54
PTPN2-215ENST00000592776 CSRNP3Q8WYN3 585 aa37.15■■■■□ 3.54
PTPN2-215ENST00000592776 ASXL2Q76L83 1435 aa37.11■■■■□ 3.53
PTPN2-215ENST00000592776 TSPOAP1O95153 1857 aa37.06■■■■□ 3.52
PTPN2-215ENST00000592776 GOLGA3Q08378 1498 aa37.03■■■■□ 3.52
PTPN2-215ENST00000592776 PLB1Q6P1J6 1458 aa37.03■■■■□ 3.52
PTPN2-215ENST00000592776 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
PTPN2-215ENST00000592776 KDM5BQ9UGL1 1544 aa37.03■■■■□ 3.52
PTPN2-215ENST00000592776 ZCCHC11Q5TAX3 1644 aaKnown RBP36.99■■■■□ 3.51
PTPN2-215ENST00000592776 P3H3Q8IVL6 736 aa36.98■■■■□ 3.51
PTPN2-215ENST00000592776 EEA1Q15075 1411 aa36.92■■■■□ 3.5
PTPN2-215ENST00000592776 GLI2P10070 1586 aa36.91■■■■□ 3.5
PTPN2-215ENST00000592776 ABCA8O94911 1581 aa36.89■■■■□ 3.5
PTPN2-215ENST00000592776 AEBP2Q6ZN18 517 aaPredicted RBP36.89■■■■□ 3.5
PTPN2-215ENST00000592776 EPRSP07814 1512 aaKnown RBP36.88■■■■□ 3.49
PTPN2-215ENST00000592776 KDM6BO15054 1643 aa36.87■■■■□ 3.49
PTPN2-215ENST00000592776 PPRC1Q5VV67 1664 aaKnown RBP36.83■■■■□ 3.49
PTPN2-215ENST00000592776 CHIC1Q5VXU3 224 aa36.83■■■■□ 3.49
PTPN2-215ENST00000592776 RANGAP1P46060 587 aaPredicted RBP36.82■■■■□ 3.48
PTPN2-215ENST00000592776 ARID3CA6NKF2 412 aa36.78■■■■□ 3.48
PTPN2-215ENST00000592776 WDR7Q9Y4E6 1490 aa36.77■■■■□ 3.48
PTPN2-215ENST00000592776 SAMD9Q5K651 1589 aa36.74■■■■□ 3.47
PTPN2-215ENST00000592776 MAP3K4Q9Y6R4 1608 aa36.73■■■■□ 3.47
PTPN2-215ENST00000592776 KCNH8Q96L42 1107 aa36.72■■■■□ 3.47
PTPN2-215ENST00000592776 EHMT2Q96KQ7 1210 aa36.7■■■■□ 3.47
PTPN2-215ENST00000592776 KIF21BO75037 1637 aa36.64■■■■□ 3.46
PTPN2-215ENST00000592776 ATP10BO94823 1461 aa36.63■■■■□ 3.45
PTPN2-215ENST00000592776 COL17A1Q9UMD9 1497 aaPredicted RBP36.63■■■■□ 3.45
PTPN2-215ENST00000592776 FHOD3Q2V2M9 1422 aa36.59■■■■□ 3.45
PTPN2-215ENST00000592776 TEX14Q8IWB6 1497 aa36.56■■■■□ 3.44
PTPN2-215ENST00000592776 RAPGEF6Q8TEU7 1601 aa36.55■■■■□ 3.44
PTPN2-215ENST00000592776 CD109Q6YHK3 1445 aa36.54■■■■□ 3.44
PTPN2-215ENST00000592776 KDM4FA0A1W2PPD8 638 aa36.48■■■■□ 3.43
PTPN2-215ENST00000592776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.48■■■■□ 3.43
PTPN2-215ENST00000592776 UBTFP17480 764 aaKnown RBP36.48■■■■□ 3.43
PTPN2-215ENST00000592776 HNRNPUL2Q1KMD3 747 aaKnown RBP36.48■■■■□ 3.43
PTPN2-215ENST00000592776 CFAP43Q8NDM7 1665 aa36.48■■■■□ 3.43
PTPN2-215ENST00000592776 MAGI3Q5TCQ9 1506 aa36.45■■■■□ 3.43
PTPN2-215ENST00000592776 NUP153P49790 1475 aaKnown RBP36.45■■■■□ 3.43
PTPN2-215ENST00000592776 EFCAB5A4FU69 1503 aa36.39■■■■□ 3.42
PTPN2-215ENST00000592776 ABCA9Q8IUA7 1624 aa36.3■■■■□ 3.4
PTPN2-215ENST00000592776 ARHGAP35Q9NRY4 1499 aa36.24■■■■□ 3.39
PTPN2-215ENST00000592776 PLEKHD1A6NEE1 506 aa36.22■■■■□ 3.39
PTPN2-215ENST00000592776 ADGRL1O94910 1474 aa36.19■■■■□ 3.38
PTPN2-215ENST00000592776 ATP1B4Q9UN42 357 aaPredicted RBP36.18■■■■□ 3.38
PTPN2-215ENST00000592776 CDK13Q14004 1512 aaKnown RBP36.17■■■■□ 3.38
PTPN2-215ENST00000592776 ARAP3Q8WWN8 1544 aa36.15■■■■□ 3.38
PTPN2-215ENST00000592776 RAPGEF3O95398 923 aa36.09■■■■□ 3.37
PTPN2-215ENST00000592776 FMN1Q68DA7 1419 aa36.08■■■■□ 3.37
PTPN2-215ENST00000592776 PHLDB1Q86UU1 1377 aa36.06■■■■□ 3.36
PTPN2-215ENST00000592776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.06■■■■□ 3.36
PTPN2-215ENST00000592776 NEO1Q92859 1461 aa36.05■■■■□ 3.36
PTPN2-215ENST00000592776 TTC37Q6PGP7 1564 aa36■■■■□ 3.35
PTPN2-215ENST00000592776 HECW1Q76N89 1606 aa36■■■■□ 3.35
PTPN2-215ENST00000592776 FRMPD1Q5SYB0 1578 aa35.93■■■■□ 3.34
PTPN2-215ENST00000592776 AKNAQ7Z591 1439 aa35.92■■■■□ 3.34
PTPN2-215ENST00000592776 FANCAO15360 1455 aa35.92■■■■□ 3.34
PTPN2-215ENST00000592776 LRRIQ1Q96JM4 1722 aa35.88■■■■□ 3.33
PTPN2-215ENST00000592776 CDK11AQ9UQ88 783 aaPredicted RBP35.85■■■■□ 3.33
PTPN2-215ENST00000592776 DENND4BO75064 1496 aaPredicted RBP35.85■■■■□ 3.33
PTPN2-215ENST00000592776 KIF14Q15058 1648 aa35.82■■■■□ 3.32
PTPN2-215ENST00000592776 PLCH2O75038 1416 aa35.82■■■■□ 3.32
PTPN2-215ENST00000592776 PCF11O94913 1555 aaKnown RBP35.81■■■■□ 3.32
PTPN2-215ENST00000592776 CFAP74Q9C0B2 1584 aa35.8■■■■□ 3.32
PTPN2-215ENST00000592776 TROQ12816 1431 aaPredicted RBP35.79■■■■□ 3.32
PTPN2-215ENST00000592776 RICTORQ6R327 1708 aa35.79■■■■□ 3.32
PTPN2-215ENST00000592776 CASKIN1Q8WXD9 1431 aa35.78■■■■□ 3.32
PTPN2-215ENST00000592776 CLIP1P30622 1438 aa35.76■■■■□ 3.32
PTPN2-215ENST00000592776 SCAPERQ9BY12 1400 aa35.72■■■■□ 3.31
PTPN2-215ENST00000592776 ARID4BQ4LE39 1312 aaPredicted RBP35.7■■■■□ 3.31
PTPN2-215ENST00000592776 MYO5CQ9NQX4 1742 aa35.69■■■■□ 3.3
PTPN2-215ENST00000592776 EFCAB2Q5VUJ9 269 aa35.69■■■■□ 3.3
PTPN2-215ENST00000592776 ARHGEF40Q8TER5 1519 aa35.66■■■■□ 3.3
PTPN2-215ENST00000592776 YEATS2Q9ULM3 1422 aa35.66■■■■□ 3.3
PTPN2-215ENST00000592776 CCDC18Q5T9S5 1454 aa35.64■■■■□ 3.3
PTPN2-215ENST00000592776 ADAMTSL3P82987 1691 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms