RNA–Protein interactions for RNA: ENST00000592262.1

GPATCH1-204, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 1,978 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-204ENST00000592262 ARHGAP35Q9NRY4 1499 aa17.41■□□□□ 0.38
GPATCH1-204ENST00000592262 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
GPATCH1-204ENST00000592262 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
GPATCH1-204ENST00000592262 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
GPATCH1-204ENST00000592262 WDR62O43379 1518 aa17.33■□□□□ 0.36
GPATCH1-204ENST00000592262 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
GPATCH1-204ENST00000592262 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
GPATCH1-204ENST00000592262 EFCAB5A4FU69 1503 aa17.3■□□□□ 0.36
GPATCH1-204ENST00000592262 CTTNBP2Q8WZ74 1663 aa17.28■□□□□ 0.36
GPATCH1-204ENST00000592262 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
GPATCH1-204ENST00000592262 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
GPATCH1-204ENST00000592262 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
GPATCH1-204ENST00000592262 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■■■□ 24.2
GPATCH1-204ENST00000592262 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
GPATCH1-204ENST00000592262 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
GPATCH1-204ENST00000592262 KANK4Q5T7N3 995 aaPredicted RBP17.22■□□□□ 0.35
GPATCH1-204ENST00000592262 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
GPATCH1-204ENST00000592262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
GPATCH1-204ENST00000592262 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
GPATCH1-204ENST00000592262 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
GPATCH1-204ENST00000592262 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
GPATCH1-204ENST00000592262 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
GPATCH1-204ENST00000592262 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
GPATCH1-204ENST00000592262 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
GPATCH1-204ENST00000592262 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
GPATCH1-204ENST00000592262 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
GPATCH1-204ENST00000592262 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
GPATCH1-204ENST00000592262 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
GPATCH1-204ENST00000592262 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
GPATCH1-204ENST00000592262 PCF11O94913 1555 aaKnown RBP17.12■□□□□ 0.33
GPATCH1-204ENST00000592262 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
GPATCH1-204ENST00000592262 LRRC9Q6ZRR7 1453 aa17.11■□□□□ 0.33
GPATCH1-204ENST00000592262 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.33
GPATCH1-204ENST00000592262 IQGAP2Q13576 1575 aa17.08■□□□□ 0.32
GPATCH1-204ENST00000592262 CFAP43Q8NDM7 1665 aa17.08■□□□□ 0.32
GPATCH1-204ENST00000592262 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.32
GPATCH1-204ENST00000592262 CCNB3Q8WWL7 1395 aa17.07■□□□□ 0.32
GPATCH1-204ENST00000592262 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
GPATCH1-204ENST00000592262 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
GPATCH1-204ENST00000592262 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
GPATCH1-204ENST00000592262 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
GPATCH1-204ENST00000592262 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
GPATCH1-204ENST00000592262 SYNJ2O15056 1496 aa17■□□□□ 0.31
GPATCH1-204ENST00000592262 MTUS2Q5JR59 1369 aa16.96■□□□□ 0.31
GPATCH1-204ENST00000592262 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
GPATCH1-204ENST00000592262 PHLDB1Q86UU1 1377 aa16.95■□□□□ 0.3
GPATCH1-204ENST00000592262 FBLN2P98095 1184 aa16.93■□□□□ 0.3
GPATCH1-204ENST00000592262 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
GPATCH1-204ENST00000592262 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
GPATCH1-204ENST00000592262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.91■□□□□ 0.3
GPATCH1-204ENST00000592262 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
GPATCH1-204ENST00000592262 ITGAEP38570 1179 aa16.9■□□□□ 0.3
GPATCH1-204ENST00000592262 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
GPATCH1-204ENST00000592262 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
GPATCH1-204ENST00000592262 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
GPATCH1-204ENST00000592262 NUP160Q12769 1436 aa16.87■□□□□ 0.29
GPATCH1-204ENST00000592262 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
GPATCH1-204ENST00000592262 CEP170Q5SW79 1584 aa16.86■□□□□ 0.29
GPATCH1-204ENST00000592262 EPRSP07814 1512 aaKnown RBP16.85■□□□□ 0.29
GPATCH1-204ENST00000592262 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
GPATCH1-204ENST00000592262 FGD6Q6ZV73 1430 aa16.84■□□□□ 0.29
GPATCH1-204ENST00000592262 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
GPATCH1-204ENST00000592262 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
GPATCH1-204ENST00000592262 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
GPATCH1-204ENST00000592262 MSH5O43196 834 aa16.82■□□□□ 0.28
GPATCH1-204ENST00000592262 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
GPATCH1-204ENST00000592262 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
GPATCH1-204ENST00000592262 CDK11AQ9UQ88 783 aaPredicted RBP16.81■□□□□ 0.28
GPATCH1-204ENST00000592262 MYOM3Q5VTT5 1437 aa16.81■□□□□ 0.28
GPATCH1-204ENST00000592262 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
GPATCH1-204ENST00000592262 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.28
GPATCH1-204ENST00000592262 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
GPATCH1-204ENST00000592262 CDK13Q14004 1512 aaKnown RBP16.75■□□□□ 0.27
GPATCH1-204ENST00000592262 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
GPATCH1-204ENST00000592262 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
GPATCH1-204ENST00000592262 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
GPATCH1-204ENST00000592262 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
GPATCH1-204ENST00000592262 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
GPATCH1-204ENST00000592262 PTPN23Q9H3S7 1636 aa16.7■□□□□ 0.26
GPATCH1-204ENST00000592262 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
GPATCH1-204ENST00000592262 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
GPATCH1-204ENST00000592262 TCOF1Q13428 1488 aaKnown RBP16.69■□□□□ 0.26
GPATCH1-204ENST00000592262 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
GPATCH1-204ENST00000592262 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
GPATCH1-204ENST00000592262 PLB1Q6P1J6 1458 aa16.66■□□□□ 0.26
GPATCH1-204ENST00000592262 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
GPATCH1-204ENST00000592262 HFM1A2PYH4 1435 aa16.64■□□□□ 0.25
GPATCH1-204ENST00000592262 CHD1O14646 1710 aa16.64■□□□□ 0.25
GPATCH1-204ENST00000592262 PTPRGP23470 1445 aa16.64■□□□□ 0.25
GPATCH1-204ENST00000592262 ABCA8O94911 1581 aa16.62■□□□□ 0.25
GPATCH1-204ENST00000592262 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
GPATCH1-204ENST00000592262 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
GPATCH1-204ENST00000592262 PTPRKQ15262 1439 aa16.6■□□□□ 0.25
GPATCH1-204ENST00000592262 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
GPATCH1-204ENST00000592262 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
GPATCH1-204ENST00000592262 AKNAQ7Z591 1439 aa16.58■□□□□ 0.24
GPATCH1-204ENST00000592262 NAIPQ13075 1403 aa16.57■□□□□ 0.24
GPATCH1-204ENST00000592262 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
GPATCH1-204ENST00000592262 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
GPATCH1-204ENST00000592262 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms