RNA–Protein interactions for RNA: ENST00000592170.5

SEH1L-209, Transcript of SEH1 like nucleoporin, humanhuman

TSL 5

Gene SEH1L, Length 787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-209ENST00000592170 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
SEH1L-209ENST00000592170 SOGA1O94964 1423 aa17.47■□□□□ 0.39
SEH1L-209ENST00000592170 ATXN8OSP0DMR3 200 aa17.46■□□□□ 0.39
SEH1L-209ENST00000592170 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.39
SEH1L-209ENST00000592170 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
SEH1L-209ENST00000592170 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
SEH1L-209ENST00000592170 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
SEH1L-209ENST00000592170 EEA1Q15075 1411 aa17.39■□□□□ 0.38
SEH1L-209ENST00000592170 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.37
SEH1L-209ENST00000592170 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
SEH1L-209ENST00000592170 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
SEH1L-209ENST00000592170 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
SEH1L-209ENST00000592170 CAPN15O75808 1086 aa17.33■□□□□ 0.36
SEH1L-209ENST00000592170 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
SEH1L-209ENST00000592170 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
SEH1L-209ENST00000592170 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
SEH1L-209ENST00000592170 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
SEH1L-209ENST00000592170 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
SEH1L-209ENST00000592170 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
SEH1L-209ENST00000592170 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
SEH1L-209ENST00000592170 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
SEH1L-209ENST00000592170 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
SEH1L-209ENST00000592170 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.36
SEH1L-209ENST00000592170 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEH1L-209ENST00000592170 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
SEH1L-209ENST00000592170 ERICH3Q5RHP9 1530 aa17.24■□□□□ 0.35
SEH1L-209ENST00000592170 IGF1RP08069 1367 aa17.23■□□□□ 0.35
SEH1L-209ENST00000592170 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
SEH1L-209ENST00000592170 KIF21BO75037 1637 aa17.22■□□□□ 0.35
SEH1L-209ENST00000592170 CUL7Q14999 1698 aa17.22■□□□□ 0.35
SEH1L-209ENST00000592170 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
SEH1L-209ENST00000592170 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
SEH1L-209ENST00000592170 DSG3P32926 999 aa17.17■□□□□ 0.34
SEH1L-209ENST00000592170 FBLN2P98095 1184 aa17.17■□□□□ 0.34
SEH1L-209ENST00000592170 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
SEH1L-209ENST00000592170 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
SEH1L-209ENST00000592170 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
SEH1L-209ENST00000592170 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
SEH1L-209ENST00000592170 RAPGEF2Q9Y4G8 1499 aa17.13■□□□□ 0.33
SEH1L-209ENST00000592170 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
SEH1L-209ENST00000592170 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
SEH1L-209ENST00000592170 FHAD1B1AJZ9 1412 aa17.1■□□□□ 0.33
SEH1L-209ENST00000592170 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
SEH1L-209ENST00000592170 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
SEH1L-209ENST00000592170 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
SEH1L-209ENST00000592170 TNIKQ9UKE5 1360 aa17.01■□□□□ 0.31
SEH1L-209ENST00000592170 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
SEH1L-209ENST00000592170 GRIN2AQ12879 1464 aa17■□□□□ 0.31
SEH1L-209ENST00000592170 CHD1O14646 1710 aa17■□□□□ 0.31
SEH1L-209ENST00000592170 ABCB7O75027 752 aa17■□□□□ 0.31
SEH1L-209ENST00000592170 POLA2Q14181 598 aa16.99■□□□□ 0.31
SEH1L-209ENST00000592170 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
SEH1L-209ENST00000592170 CEP170Q5SW79 1584 aa16.93■□□□□ 0.3
SEH1L-209ENST00000592170 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
SEH1L-209ENST00000592170 NUP160Q12769 1436 aa16.89■□□□□ 0.29
SEH1L-209ENST00000592170 IQGAP2Q13576 1575 aa16.88■□□□□ 0.29
SEH1L-209ENST00000592170 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
SEH1L-209ENST00000592170 CLIP1P30622 1438 aa16.84■□□□□ 0.29
SEH1L-209ENST00000592170 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
SEH1L-209ENST00000592170 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
SEH1L-209ENST00000592170 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
SEH1L-209ENST00000592170 UGGT2Q9NYU1 1516 aa16.79■□□□□ 0.28
SEH1L-209ENST00000592170 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
SEH1L-209ENST00000592170 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
SEH1L-209ENST00000592170 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
SEH1L-209ENST00000592170 KIAA0556O60303 1618 aa16.72■□□□□ 0.27
SEH1L-209ENST00000592170 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
SEH1L-209ENST00000592170 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
SEH1L-209ENST00000592170 FHOD3Q2V2M9 1422 aa16.69■□□□□ 0.26
SEH1L-209ENST00000592170 JPH4Q96JJ6 628 aa16.68■□□□□ 0.26
SEH1L-209ENST00000592170 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
SEH1L-209ENST00000592170 VPS8Q8N3P4 1428 aa16.65■□□□□ 0.26
SEH1L-209ENST00000592170 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
SEH1L-209ENST00000592170 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
SEH1L-209ENST00000592170 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
SEH1L-209ENST00000592170 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
SEH1L-209ENST00000592170 FMN1Q68DA7 1419 aa16.6■□□□□ 0.25
SEH1L-209ENST00000592170 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
SEH1L-209ENST00000592170 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
SEH1L-209ENST00000592170 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
SEH1L-209ENST00000592170 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.23
SEH1L-209ENST00000592170 TTBK1Q5TCY1 1321 aaPredicted RBP16.51■□□□□ 0.23
SEH1L-209ENST00000592170 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
SEH1L-209ENST00000592170 PTPRGP23470 1445 aa16.5■□□□□ 0.23
SEH1L-209ENST00000592170 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
SEH1L-209ENST00000592170 ABCA8O94911 1581 aa16.49■□□□□ 0.23
SEH1L-209ENST00000592170 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
SEH1L-209ENST00000592170 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
SEH1L-209ENST00000592170 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
SEH1L-209ENST00000592170 FAM69CQ0P6D2 419 aa16.45■□□□□ 0.22
SEH1L-209ENST00000592170 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
SEH1L-209ENST00000592170 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
SEH1L-209ENST00000592170 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
SEH1L-209ENST00000592170 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
SEH1L-209ENST00000592170 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
SEH1L-209ENST00000592170 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
SEH1L-209ENST00000592170 EPRSP07814 1512 aaKnown RBP16.41■□□□□ 0.22
SEH1L-209ENST00000592170 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
SEH1L-209ENST00000592170 ABCC2Q92887 1545 aa16.4■□□□□ 0.22
SEH1L-209ENST00000592170 UHRF1BP1LA0JNW5 1464 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms