RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 SLC39A7Q92504 469 aa9.09□□□□□ -0.95
DNMT1-226ENST00000592054 ATMINO43313 823 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-226ENST00000592054 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-226ENST00000592054 C7P10643 843 aa9.07□□□□□ -0.96
DNMT1-226ENST00000592054 POTEGQ6S5H5 508 aa9.07□□□□□ -0.96
DNMT1-226ENST00000592054 MAMSTRQ6ZN01 415 aa9.03□□□□□ -0.96
DNMT1-226ENST00000592054 PLEKHG5O94827 1062 aa9.02□□□□□ -0.97
DNMT1-226ENST00000592054 ATN1P54259 1190 aaPredicted RBP9.01□□□□□ -0.97
DNMT1-226ENST00000592054 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
DNMT1-226ENST00000592054 POTEJP0CG39 1038 aa8.99□□□□□ -0.97
DNMT1-226ENST00000592054 MIER1Q8N108 512 aa8.99□□□□□ -0.97
DNMT1-226ENST00000592054 KIF12Q96FN5 646 aa8.99□□□□□ -0.97
DNMT1-226ENST00000592054 SCUBE2Q9NQ36 999 aa8.99□□□□□ -0.97
DNMT1-226ENST00000592054 PROM2Q8N271 834 aa8.98□□□□□ -0.97
DNMT1-226ENST00000592054 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-226ENST00000592054 BMP2KQ9NSY1 1161 aaPredicted RBP8.95□□□□□ -0.98
DNMT1-226ENST00000592054 MAP3K13O43283 966 aa8.94□□□□□ -0.98
DNMT1-226ENST00000592054 TRPC6Q9Y210 931 aa8.93□□□□□ -0.98
DNMT1-226ENST00000592054 RASEFQ8IZ41 740 aa8.92□□□□□ -0.98
DNMT1-226ENST00000592054 PCDH10Q9P2E7 1040 aa8.92□□□□□ -0.98
DNMT1-226ENST00000592054 SEC24BO95487 1268 aa8.91□□□□□ -0.98
DNMT1-226ENST00000592054 TIE1P35590 1138 aa8.9□□□□□ -0.98
DNMT1-226ENST00000592054 PLCD3Q8N3E9 789 aa8.9□□□□□ -0.98
DNMT1-226ENST00000592054 POTEFA5A3E0 1075 aa8.88□□□□□ -0.99
DNMT1-226ENST00000592054 TTLL13PA6NNM8 815 aa8.86□□□□□ -0.99
DNMT1-226ENST00000592054 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
DNMT1-226ENST00000592054 COLQQ9Y215 455 aaPredicted RBP8.84□□□□□ -0.99
DNMT1-226ENST00000592054 PCDHB13Q9Y5F0 798 aa8.84□□□□□ -0.99
DNMT1-226ENST00000592054 TRIM35Q9UPQ4 493 aa8.83□□□□□ -1
DNMT1-226ENST00000592054 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
DNMT1-226ENST00000592054 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
DNMT1-226ENST00000592054 IER5LQ5T953 404 aa8.78□□□□□ -1
DNMT1-226ENST00000592054 IFNL1Q8IU54 200 aa8.76□□□□□ -1.01
DNMT1-226ENST00000592054 TMEM106CQ9BVX2 250 aa8.76□□□□□ -1.01
DNMT1-226ENST00000592054 NUBP1P53384 320 aa8.75□□□□□ -1.01
DNMT1-226ENST00000592054 SLAIN1Q8ND83 568 aa8.75□□□□□ -1.01
DNMT1-226ENST00000592054 FAM212AQ96EL1 285 aa8.75□□□□□ -1.01
DNMT1-226ENST00000592054 PLCG2P16885 1265 aa8.74□□□□□ -1.01
DNMT1-226ENST00000592054 ABCC9O60706 1549 aa8.74□□□□□ -1.01
DNMT1-226ENST00000592054 CDAN1Q8IWY9 1227 aa8.73□□□□□ -1.01
DNMT1-226ENST00000592054 ST18O60284 1047 aa8.68□□□□□ -1.02
DNMT1-226ENST00000592054 DCAF8Q5TAQ9 597 aa8.68□□□□□ -1.02
DNMT1-226ENST00000592054 NISCHQ9Y2I1 1504 aa8.67□□□□□ -1.02
DNMT1-226ENST00000592054 FKBP8Q14318 412 aa8.66□□□□□ -1.02
DNMT1-226ENST00000592054 PYGBP11216 843 aa8.65□□□□□ -1.02
DNMT1-226ENST00000592054 IRX5P78411 483 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-226ENST00000592054 OCEL1Q9H607 264 aa8.63□□□□□ -1.03
DNMT1-226ENST00000592054 PCDHB8Q9UN66 801 aa8.61□□□□□ -1.03
DNMT1-226ENST00000592054 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.6□□□□□ -1.03
DNMT1-226ENST00000592054 SNPHO15079 494 aa8.58□□□□□ -1.04
DNMT1-226ENST00000592054 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
DNMT1-226ENST00000592054 GOLGA2Q08379 1002 aa8.55□□□□□ -1.04
DNMT1-226ENST00000592054 MARVELD3Q96A59 401 aa8.55□□□□□ -1.04
DNMT1-226ENST00000592054 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
DNMT1-226ENST00000592054 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
DNMT1-226ENST00000592054 MKRN3Q13064 507 aaKnown RBP8.53□□□□□ -1.04
DNMT1-226ENST00000592054 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
DNMT1-226ENST00000592054 MMRN1Q13201 1228 aa8.51□□□□□ -1.05
DNMT1-226ENST00000592054 SPNS2Q8IVW8 549 aa8.51□□□□□ -1.05
DNMT1-226ENST00000592054 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
DNMT1-226ENST00000592054 GSE1Q14687 1217 aa8.5□□□□□ -1.05
DNMT1-226ENST00000592054 ZNF467Q7Z7K2 595 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-226ENST00000592054 L3MBTL3Q96JM7 780 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-226ENST00000592054 EMP3P54852 163 aa8.47□□□□□ -1.05
DNMT1-226ENST00000592054 PDCD7Q8N8D1 485 aaKnown RBP8.47□□□□□ -1.05
DNMT1-226ENST00000592054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.058e-7■□□□□ 10.6
DNMT1-226ENST00000592054 PSEN1P49768 467 aa8.44□□□□□ -1.06
DNMT1-226ENST00000592054 VASPP50552 380 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-226ENST00000592054 FAM205CA6NFA0 338 aa8.41□□□□□ -1.06
DNMT1-226ENST00000592054 G3V3G9 751 aa8.4□□□□□ -1.06
DNMT1-226ENST00000592054 CHRM1P11229 460 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-226ENST00000592054 HS3ST6Q96QI5 342 aa8.39□□□□□ -1.07
DNMT1-226ENST00000592054 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
DNMT1-226ENST00000592054 DPY19L2Q6NUT2 758 aa8.36□□□□□ -1.07
DNMT1-226ENST00000592054 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
DNMT1-226ENST00000592054 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
DNMT1-226ENST00000592054 POTEB3A0JP26 581 aa8.35□□□□□ -1.07
DNMT1-226ENST00000592054 POTEBQ6S5H4 581 aa8.35□□□□□ -1.07
DNMT1-226ENST00000592054 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
DNMT1-226ENST00000592054 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
DNMT1-226ENST00000592054 BOLA1Q9Y3E2 137 aa8.34□□□□□ -1.07
DNMT1-226ENST00000592054 ZNF710Q8N1W2 664 aa8.32□□□□□ -1.08
DNMT1-226ENST00000592054 SPOCK2Q92563 424 aa8.3□□□□□ -1.08
DNMT1-226ENST00000592054 ILDR1Q86SU0 546 aaPredicted RBP8.29□□□□□ -1.08
DNMT1-226ENST00000592054 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
DNMT1-226ENST00000592054 ERBB3P21860 1342 aa8.27□□□□□ -1.09
DNMT1-226ENST00000592054 HOXB1P14653 301 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-226ENST00000592054 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
DNMT1-226ENST00000592054 IFNLR1Q8IU57 520 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-226ENST00000592054 RIMBP2O15034 1052 aa8.23□□□□□ -1.09
DNMT1-226ENST00000592054 EFCAB3Q8N7B9 438 aa8.22□□□□□ -1.09
DNMT1-226ENST00000592054 VARS2Q5ST30 1063 aaKnown RBP8.2□□□□□ -1.1
DNMT1-226ENST00000592054 RNF166Q96A37 237 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-226ENST00000592054 TRIM41Q8WV44 630 aa8.15□□□□□ -1.1
DNMT1-226ENST00000592054 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
DNMT1-226ENST00000592054 MYT1LQ9UL68 1186 aa8.14□□□□□ -1.11
DNMT1-226ENST00000592054 CCDC180Q9P1Z9 1646 aa8.14□□□□□ -1.11
DNMT1-226ENST00000592054 TMEM92Q6UXU6 159 aa8.12□□□□□ -1.11
DNMT1-226ENST00000592054 ZSWIM6Q9HCJ5 1215 aa8.11□□□□□ -1.11
DNMT1-226ENST00000592054 SOX12O15370 315 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms