RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-213ENST00000591461 FAM9AQ8IZU1 332 aaPredicted RBP24.7■■□□□ 1.54
PKN1-213ENST00000591461 CUL7Q14999 1698 aa24.68■■□□□ 1.54
PKN1-213ENST00000591461 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
PKN1-213ENST00000591461 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
PKN1-213ENST00000591461 KIAA0586Q9BVV6 1533 aa24.6■■□□□ 1.53
PKN1-213ENST00000591461 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
PKN1-213ENST00000591461 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
PKN1-213ENST00000591461 TTBK1Q5TCY1 1321 aaPredicted RBP24.55■■□□□ 1.52
PKN1-213ENST00000591461 PRXQ9BXM0 1461 aa24.52■■□□□ 1.52
PKN1-213ENST00000591461 EHMT2Q96KQ7 1210 aa24.51■■□□□ 1.51
PKN1-213ENST00000591461 TRHP20396 242 aaPredicted RBP24.41■■□□□ 1.5
PKN1-213ENST00000591461 IQGAP2Q13576 1575 aa24.41■■□□□ 1.5
PKN1-213ENST00000591461 EEA1Q15075 1411 aa24.38■■□□□ 1.49
PKN1-213ENST00000591461 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
PKN1-213ENST00000591461 DISP1Q96F81 1524 aa24.35■■□□□ 1.49
PKN1-213ENST00000591461 PTPRGP23470 1445 aa24.34■■□□□ 1.49
PKN1-213ENST00000591461 CARMIL2Q6F5E8 1435 aa24.32■■□□□ 1.48
PKN1-213ENST00000591461 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
PKN1-213ENST00000591461 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
PKN1-213ENST00000591461 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
PKN1-213ENST00000591461 UBTFP17480 764 aaKnown RBP24.2■■□□□ 1.46
PKN1-213ENST00000591461 CTTNBP2Q8WZ74 1663 aa24.2■■□□□ 1.46
PKN1-213ENST00000591461 ADCY10Q96PN6 1610 aa24.2■■□□□ 1.46
PKN1-213ENST00000591461 NPM1P06748 294 aaKnown RBP eCLIP24.19■■□□□ 1.46
PKN1-213ENST00000591461 KIAA0556O60303 1618 aa24.19■■□□□ 1.46
PKN1-213ENST00000591461 KIF21BO75037 1637 aa24.14■■□□□ 1.46
PKN1-213ENST00000591461 UACAQ9BZF9 1416 aa24.14■■□□□ 1.45
PKN1-213ENST00000591461 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
PKN1-213ENST00000591461 ARID3CA6NKF2 412 aa24.1■■□□□ 1.45
PKN1-213ENST00000591461 PLB1Q6P1J6 1458 aa24.1■■□□□ 1.45
PKN1-213ENST00000591461 FAM69CQ0P6D2 419 aa24.06■■□□□ 1.44
PKN1-213ENST00000591461 FHOD3Q2V2M9 1422 aa24.04■■□□□ 1.44
PKN1-213ENST00000591461 ABCC2Q92887 1545 aa24.04■■□□□ 1.44
PKN1-213ENST00000591461 UHRF1BP1LA0JNW5 1464 aa24.03■■□□□ 1.44
PKN1-213ENST00000591461 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
PKN1-213ENST00000591461 ASXL2Q76L83 1435 aa23.98■■□□□ 1.43
PKN1-213ENST00000591461 MAPKBP1O60336 1514 aa23.97■■□□□ 1.43
PKN1-213ENST00000591461 ABCA8O94911 1581 aa23.96■■□□□ 1.43
PKN1-213ENST00000591461 ABCC10Q5T3U5 1492 aa23.96■■□□□ 1.43
PKN1-213ENST00000591461 KDM5BQ9UGL1 1544 aa23.94■■□□□ 1.42
PKN1-213ENST00000591461 LOC105371045A0A1W2PR82 267 aa23.9■■□□□ 1.42
PKN1-213ENST00000591461 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
PKN1-213ENST00000591461 ZCCHC11Q5TAX3 1644 aaKnown RBP23.88■■□□□ 1.41
PKN1-213ENST00000591461 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
PKN1-213ENST00000591461 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
PKN1-213ENST00000591461 ATP10BO94823 1461 aa23.86■■□□□ 1.41
PKN1-213ENST00000591461 KIF13AQ9H1H9 1805 aa23.85■■□□□ 1.41
PKN1-213ENST00000591461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
PKN1-213ENST00000591461 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
PKN1-213ENST00000591461 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.41
PKN1-213ENST00000591461 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
PKN1-213ENST00000591461 NUP153P49790 1475 aaKnown RBP23.8■■□□□ 1.4
PKN1-213ENST00000591461 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
PKN1-213ENST00000591461 RAPGEF6Q8TEU7 1601 aa23.78■■□□□ 1.4
PKN1-213ENST00000591461 WDR7Q9Y4E6 1490 aa23.77■■□□□ 1.4
PKN1-213ENST00000591461 CLIP1P30622 1438 aa23.71■■□□□ 1.39
PKN1-213ENST00000591461 GLI2P10070 1586 aa23.69■■□□□ 1.38
PKN1-213ENST00000591461 TSPOAP1O95153 1857 aa23.68■■□□□ 1.38
PKN1-213ENST00000591461 CDK13Q14004 1512 aaKnown RBP23.68■■□□□ 1.38
PKN1-213ENST00000591461 FMN1Q68DA7 1419 aa23.67■■□□□ 1.38
PKN1-213ENST00000591461 PLEKHD1A6NEE1 506 aa23.64■■□□□ 1.37
PKN1-213ENST00000591461 CD109Q6YHK3 1445 aa23.62■■□□□ 1.37
PKN1-213ENST00000591461 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
PKN1-213ENST00000591461 PPRC1Q5VV67 1664 aaKnown RBP23.6■■□□□ 1.37
PKN1-213ENST00000591461 MAP3K4Q9Y6R4 1608 aa23.58■■□□□ 1.36
PKN1-213ENST00000591461 COL17A1Q9UMD9 1497 aaPredicted RBP23.57■■□□□ 1.36
PKN1-213ENST00000591461 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
PKN1-213ENST00000591461 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
PKN1-213ENST00000591461 HECW1Q76N89 1606 aa23.51■■□□□ 1.35
PKN1-213ENST00000591461 KDM6BO15054 1643 aa23.5■■□□□ 1.35
PKN1-213ENST00000591461 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
PKN1-213ENST00000591461 TEX14Q8IWB6 1497 aa23.47■■□□□ 1.35
PKN1-213ENST00000591461 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
PKN1-213ENST00000591461 LRRIQ1Q96JM4 1722 aa23.45■■□□□ 1.34
PKN1-213ENST00000591461 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
PKN1-213ENST00000591461 ABCA9Q8IUA7 1624 aa23.44■■□□□ 1.34
PKN1-213ENST00000591461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
PKN1-213ENST00000591461 FYCO1Q9BQS8 1478 aa23.42■■□□□ 1.34
PKN1-213ENST00000591461 TROQ12816 1431 aaPredicted RBP23.41■■□□□ 1.34
PKN1-213ENST00000591461 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
PKN1-213ENST00000591461 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
PKN1-213ENST00000591461 KIF14Q15058 1648 aa23.37■■□□□ 1.33
PKN1-213ENST00000591461 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
PKN1-213ENST00000591461 PLCH2O75038 1416 aa23.31■■□□□ 1.32
PKN1-213ENST00000591461 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
PKN1-213ENST00000591461 FANCAO15360 1455 aa23.3■■□□□ 1.32
PKN1-213ENST00000591461 NEO1Q92859 1461 aa23.28■■□□□ 1.32
PKN1-213ENST00000591461 ARAP3Q8WWN8 1544 aa23.28■■□□□ 1.32
PKN1-213ENST00000591461 VPS8Q8N3P4 1428 aa23.27■■□□□ 1.32
PKN1-213ENST00000591461 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
PKN1-213ENST00000591461 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
PKN1-213ENST00000591461 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
PKN1-213ENST00000591461 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
PKN1-213ENST00000591461 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
PKN1-213ENST00000591461 SCAPERQ9BY12 1400 aa23.21■■□□□ 1.31
PKN1-213ENST00000591461 ZNF777Q9ULD5 760 aaPredicted RBP23.2■■□□□ 1.3
PKN1-213ENST00000591461 DENND4BO75064 1496 aaPredicted RBP23.19■■□□□ 1.3
PKN1-213ENST00000591461 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
PKN1-213ENST00000591461 FRMPD1Q5SYB0 1578 aa23.18■■□□□ 1.3
PKN1-213ENST00000591461 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms