RNA–Protein interactions for RNA: ENST00000590677.5

LINC00662-207, long intergenic non-protein coding RNA 662, humanhuman

TSL 5 BASIC

Gene LINC00662, Length 883 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-207ENST00000590677 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
LINC00662-207ENST00000590677 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
LINC00662-207ENST00000590677 SPOCK2Q92563 424 aa15.45■□□□□ 0.06
LINC00662-207ENST00000590677 CUX2O14529 1486 aa15.45■□□□□ 0.06
LINC00662-207ENST00000590677 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00662-207ENST00000590677 NCAPD3P42695 1498 aa15.43■□□□□ 0.06
LINC00662-207ENST00000590677 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
LINC00662-207ENST00000590677 NUBP1P53384 320 aa15.42■□□□□ 0.06
LINC00662-207ENST00000590677 POTEHQ6S545 545 aa15.4■□□□□ 0.06
LINC00662-207ENST00000590677 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
LINC00662-207ENST00000590677 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
LINC00662-207ENST00000590677 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
LINC00662-207ENST00000590677 C19orf67A6NJJ6 358 aa15.29■□□□□ 0.04
LINC00662-207ENST00000590677 HMGXB3Q12766 1538 aa15.28■□□□□ 0.04
LINC00662-207ENST00000590677 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
LINC00662-207ENST00000590677 NESP48681 1621 aa15.25■□□□□ 0.03
LINC00662-207ENST00000590677 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
LINC00662-207ENST00000590677 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
LINC00662-207ENST00000590677 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
LINC00662-207ENST00000590677 CD44P16070 742 aaKnown RBP15.2■□□□□ 0.02
LINC00662-207ENST00000590677 GSE1Q14687 1217 aa15.19■□□□□ 0.02
LINC00662-207ENST00000590677 RTN4Q9NQC3 1192 aaKnown RBP15.18■□□□□ 0.02
LINC00662-207ENST00000590677 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
LINC00662-207ENST00000590677 PKD2Q13563 968 aa15.17■□□□□ 0.02
LINC00662-207ENST00000590677 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
LINC00662-207ENST00000590677 HAX1O00165 279 aa15.15■□□□□ 0.02
LINC00662-207ENST00000590677 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
LINC00662-207ENST00000590677 CCDC61Q9Y6R9 512 aa15.15■□□□□ 0.02
LINC00662-207ENST00000590677 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
LINC00662-207ENST00000590677 CIZ1Q9ULV3 898 aaPredicted RBP15.13■□□□□ 0.01
LINC00662-207ENST00000590677 EVX2Q03828 476 aa15.12■□□□□ 0.01
LINC00662-207ENST00000590677 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
LINC00662-207ENST00000590677 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
LINC00662-207ENST00000590677 ZRANB1Q9UGI0 708 aa15.1■□□□□ 0.01
LINC00662-207ENST00000590677 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
LINC00662-207ENST00000590677 ZNF579Q8NAF0 562 aaKnown RBP15.08■□□□□ 0
LINC00662-207ENST00000590677 TRIM41Q8WV44 630 aa15.08■□□□□ 0
LINC00662-207ENST00000590677 CHRM1P11229 460 aaPredicted RBP15.07■□□□□ 0
LINC00662-207ENST00000590677 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
LINC00662-207ENST00000590677 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
LINC00662-207ENST00000590677 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
LINC00662-207ENST00000590677 PHF12Q96QT6 1004 aa14.99□□□□□ -0.01
LINC00662-207ENST00000590677 KIF21AQ7Z4S6 1674 aa14.99□□□□□ -0.01
LINC00662-207ENST00000590677 ECM2O94769 699 aaPredicted RBP14.98□□□□□ -0.01
LINC00662-207ENST00000590677 PYGBP11216 843 aa14.98□□□□□ -0.01
LINC00662-207ENST00000590677 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
LINC00662-207ENST00000590677 SGIP1Q9BQI5 828 aa14.94□□□□□ -0.02
LINC00662-207ENST00000590677 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
LINC00662-207ENST00000590677 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
LINC00662-207ENST00000590677 MAP3K13O43283 966 aa14.91□□□□□ -0.02
LINC00662-207ENST00000590677 CLCN6P51797 869 aa14.91□□□□□ -0.02
LINC00662-207ENST00000590677 WDR62O43379 1518 aa14.88□□□□□ -0.03
LINC00662-207ENST00000590677 RGL2O15211 777 aa14.88□□□□□ -0.03
LINC00662-207ENST00000590677 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
LINC00662-207ENST00000590677 PCDHB13Q9Y5F0 798 aa14.85□□□□□ -0.03
LINC00662-207ENST00000590677 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
LINC00662-207ENST00000590677 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
LINC00662-207ENST00000590677 MS4A3Q96HJ5 214 aa14.83□□□□□ -0.04
LINC00662-207ENST00000590677 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
LINC00662-207ENST00000590677 WIZO95785 1651 aa14.82□□□□□ -0.04
LINC00662-207ENST00000590677 RIOK3O14730 519 aaKnown RBP14.81□□□□□ -0.04
LINC00662-207ENST00000590677 GABBR2O75899 941 aa14.81□□□□□ -0.04
LINC00662-207ENST00000590677 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
LINC00662-207ENST00000590677 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
LINC00662-207ENST00000590677 PCDHB8Q9UN66 801 aa14.79□□□□□ -0.04
LINC00662-207ENST00000590677 CFTRP13569 1480 aa14.74□□□□□ -0.05
LINC00662-207ENST00000590677 VGFO15240 615 aaPredicted RBP14.73□□□□□ -0.05
LINC00662-207ENST00000590677 TRPC6Q9Y210 931 aa14.71□□□□□ -0.05
LINC00662-207ENST00000590677 PDAP1Q13442 181 aaKnown RBP14.7□□□□□ -0.06
LINC00662-207ENST00000590677 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
LINC00662-207ENST00000590677 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
LINC00662-207ENST00000590677 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
LINC00662-207ENST00000590677 TIE1P35590 1138 aa14.66□□□□□ -0.06
LINC00662-207ENST00000590677 PSEN1P49768 467 aa14.66□□□□□ -0.06
LINC00662-207ENST00000590677 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
LINC00662-207ENST00000590677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.64□□□□□ -0.07
LINC00662-207ENST00000590677 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
LINC00662-207ENST00000590677 ZFP91Q96JP5 570 aaPredicted RBP14.64□□□□□ -0.07
LINC00662-207ENST00000590677 BMP2KQ9NSY1 1161 aaPredicted RBP14.62□□□□□ -0.07
LINC00662-207ENST00000590677 HS6ST3Q8IZP7 471 aa14.6□□□□□ -0.07
LINC00662-207ENST00000590677 ASTLQ6HA08 431 aaPredicted RBP14.59□□□□□ -0.07
LINC00662-207ENST00000590677 TTLL13PA6NNM8 815 aa14.58□□□□□ -0.08
LINC00662-207ENST00000590677 TMEM106CQ9BVX2 250 aa14.57□□□□□ -0.08
LINC00662-207ENST00000590677 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
LINC00662-207ENST00000590677 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
LINC00662-207ENST00000590677 STK25O00506 426 aa14.54□□□□□ -0.08
LINC00662-207ENST00000590677 CHGAP10645 457 aaKnown RBP14.54□□□□□ -0.08
LINC00662-207ENST00000590677 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
LINC00662-207ENST00000590677 IFT140Q96RY7 1462 aa14.54□□□□□ -0.08
LINC00662-207ENST00000590677 ZNF608Q9ULD9 1512 aaPredicted RBP14.54□□□□□ -0.08
LINC00662-207ENST00000590677 ATN1P54259 1190 aaPredicted RBP14.52□□□□□ -0.09
LINC00662-207ENST00000590677 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.09
LINC00662-207ENST00000590677 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.09
LINC00662-207ENST00000590677 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.09
LINC00662-207ENST00000590677 DCBLD2Q96PD2 775 aa14.51□□□□□ -0.09
LINC00662-207ENST00000590677 STK24Q9Y6E0 443 aa14.5□□□□□ -0.09
LINC00662-207ENST00000590677 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
LINC00662-207ENST00000590677 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
LINC00662-207ENST00000590677 ARHGEF11O15085 1522 aa14.47□□□□□ -0.09
LINC00662-207ENST00000590677 PRDM2Q13029 1718 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms