RNA–Protein interactions for RNA: ENST00000590605.2

TCF3-214, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-214ENST00000590605 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
TCF3-214ENST00000590605 KIF21BO75037 1637 aa25.8■■□□□ 1.72
TCF3-214ENST00000590605 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
TCF3-214ENST00000590605 GOLGA3Q08378 1498 aa25.73■■□□□ 1.71
TCF3-214ENST00000590605 NUP160Q12769 1436 aa25.66■■□□□ 1.7
TCF3-214ENST00000590605 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
TCF3-214ENST00000590605 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.69
TCF3-214ENST00000590605 TRHP20396 242 aaPredicted RBP25.56■■□□□ 1.68
TCF3-214ENST00000590605 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
TCF3-214ENST00000590605 CEP170Q5SW79 1584 aa25.54■■□□□ 1.68
TCF3-214ENST00000590605 LOC105371045A0A1W2PR82 267 aa25.52■■□□□ 1.68
TCF3-214ENST00000590605 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
TCF3-214ENST00000590605 IQGAP2Q13576 1575 aa25.46■■□□□ 1.67
TCF3-214ENST00000590605 CTTNBP2Q8WZ74 1663 aa25.45■■□□□ 1.67
TCF3-214ENST00000590605 JPH4Q96JJ6 628 aa25.43■■□□□ 1.66
TCF3-214ENST00000590605 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
TCF3-214ENST00000590605 SHROOM2Q13796 1616 aa25.39■■□□□ 1.66
TCF3-214ENST00000590605 UGGT2Q9NYU1 1516 aa25.37■■□□□ 1.65
TCF3-214ENST00000590605 CARMIL2Q6F5E8 1435 aa25.32■■□□□ 1.64
TCF3-214ENST00000590605 EFCAB5A4FU69 1503 aa25.29■■□□□ 1.64
TCF3-214ENST00000590605 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
TCF3-214ENST00000590605 CLIP1P30622 1438 aa25.28■■□□□ 1.64
TCF3-214ENST00000590605 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
TCF3-214ENST00000590605 DISP1Q96F81 1524 aa25.23■■□□□ 1.63
TCF3-214ENST00000590605 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
TCF3-214ENST00000590605 RANGAP1P46060 587 aaPredicted RBP25.22■■□□□ 1.63
TCF3-214ENST00000590605 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
TCF3-214ENST00000590605 KIAA0556O60303 1618 aa25.19■■□□□ 1.62
TCF3-214ENST00000590605 P3H3Q8IVL6 736 aa25.11■■□□□ 1.61
TCF3-214ENST00000590605 PTPRGP23470 1445 aa25.1■■□□□ 1.61
TCF3-214ENST00000590605 FMN1Q68DA7 1419 aa25.1■■□□□ 1.61
TCF3-214ENST00000590605 FHOD3Q2V2M9 1422 aa25.09■■□□□ 1.61
TCF3-214ENST00000590605 KIF13AQ9H1H9 1805 aa25.02■■□□□ 1.6
TCF3-214ENST00000590605 VPS8Q8N3P4 1428 aa24.97■■□□□ 1.59
TCF3-214ENST00000590605 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
TCF3-214ENST00000590605 UACAQ9BZF9 1416 aa24.95■■□□□ 1.58
TCF3-214ENST00000590605 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
TCF3-214ENST00000590605 NPM1P06748 294 aaKnown RBP eCLIP24.93■■□□□ 1.58
TCF3-214ENST00000590605 CASKIN1Q8WXD9 1431 aa24.93■■□□□ 1.58
TCF3-214ENST00000590605 UHRF1BP1LA0JNW5 1464 aa24.91■■□□□ 1.58
TCF3-214ENST00000590605 MAPKBP1O60336 1514 aa24.91■■□□□ 1.58
TCF3-214ENST00000590605 ABCA8O94911 1581 aa24.89■■□□□ 1.58
TCF3-214ENST00000590605 PLB1Q6P1J6 1458 aa24.88■■□□□ 1.57
TCF3-214ENST00000590605 FYCO1Q9BQS8 1478 aa24.88■■□□□ 1.57
TCF3-214ENST00000590605 ABCC10Q5T3U5 1492 aa24.86■■□□□ 1.57
TCF3-214ENST00000590605 RAPGEF6Q8TEU7 1601 aa24.86■■□□□ 1.57
TCF3-214ENST00000590605 ABCC2Q92887 1545 aa24.86■■□□□ 1.57
TCF3-214ENST00000590605 DIP2BQ9P265 1576 aa24.84■■□□□ 1.57
TCF3-214ENST00000590605 FAM69CQ0P6D2 419 aa24.83■■□□□ 1.57
TCF3-214ENST00000590605 HECW1Q76N89 1606 aa24.81■■□□□ 1.56
TCF3-214ENST00000590605 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
TCF3-214ENST00000590605 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
TCF3-214ENST00000590605 PCF11O94913 1555 aaKnown RBP24.79■■□□□ 1.56
TCF3-214ENST00000590605 CCDC18Q5T9S5 1454 aa24.78■■□□□ 1.56
TCF3-214ENST00000590605 APLP2Q06481 763 aa24.77■■□□□ 1.56
TCF3-214ENST00000590605 AEBP2Q6ZN18 517 aaPredicted RBP24.76■■□□□ 1.55
TCF3-214ENST00000590605 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
TCF3-214ENST00000590605 EPRSP07814 1512 aaKnown RBP24.74■■□□□ 1.55
TCF3-214ENST00000590605 MAP3K1Q13233 1512 aa24.74■■□□□ 1.55
TCF3-214ENST00000590605 CDK11AQ9UQ88 783 aaPredicted RBP24.73■■□□□ 1.55
TCF3-214ENST00000590605 ATP10BO94823 1461 aa24.71■■□□□ 1.55
TCF3-214ENST00000590605 TSPOAP1O95153 1857 aa24.71■■□□□ 1.55
TCF3-214ENST00000590605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
TCF3-214ENST00000590605 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
TCF3-214ENST00000590605 PLEKHD1A6NEE1 506 aa24.64■■□□□ 1.54
TCF3-214ENST00000590605 KDM6BO15054 1643 aa24.63■■□□□ 1.53
TCF3-214ENST00000590605 ASXL2Q76L83 1435 aa24.61■■□□□ 1.53
TCF3-214ENST00000590605 CDK13Q14004 1512 aaKnown RBP24.61■■□□□ 1.53
TCF3-214ENST00000590605 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
TCF3-214ENST00000590605 TIAM1Q13009 1591 aa24.61■■□□□ 1.53
TCF3-214ENST00000590605 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
TCF3-214ENST00000590605 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
TCF3-214ENST00000590605 LRRIQ1Q96JM4 1722 aa24.56■■□□□ 1.52
TCF3-214ENST00000590605 MTUS2Q5JR59 1369 aa24.55■■□□□ 1.52
TCF3-214ENST00000590605 GLI2P10070 1586 aa24.55■■□□□ 1.52
TCF3-214ENST00000590605 TROQ12816 1431 aaPredicted RBP24.54■■□□□ 1.52
TCF3-214ENST00000590605 LRRC9Q6ZRR7 1453 aa24.54■■□□□ 1.52
TCF3-214ENST00000590605 WDR7Q9Y4E6 1490 aa24.52■■□□□ 1.52
TCF3-214ENST00000590605 PPRC1Q5VV67 1664 aaKnown RBP24.52■■□□□ 1.52
TCF3-214ENST00000590605 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
TCF3-214ENST00000590605 KANK4Q5T7N3 995 aaPredicted RBP24.49■■□□□ 1.51
TCF3-214ENST00000590605 MAGI3Q5TCQ9 1506 aa24.45■■□□□ 1.5
TCF3-214ENST00000590605 MAP3K4Q9Y6R4 1608 aa24.44■■□□□ 1.5
TCF3-214ENST00000590605 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
TCF3-214ENST00000590605 KIF14Q15058 1648 aa24.39■■□□□ 1.5
TCF3-214ENST00000590605 SUPT6HQ7KZ85 1726 aaKnown RBP24.37■■□□□ 1.49
TCF3-214ENST00000590605 TEX14Q8IWB6 1497 aa24.37■■□□□ 1.49
TCF3-214ENST00000590605 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
TCF3-214ENST00000590605 CCNB3Q8WWL7 1395 aa24.31■■□□□ 1.48
TCF3-214ENST00000590605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
TCF3-214ENST00000590605 ABCA9Q8IUA7 1624 aa24.29■■□□□ 1.48
TCF3-214ENST00000590605 PPARGC1BQ86YN6 1023 aaKnown RBP24.29■■□□□ 1.48
TCF3-214ENST00000590605 COL17A1Q9UMD9 1497 aaPredicted RBP24.27■■□□□ 1.48
TCF3-214ENST00000590605 KDM4FA0A1W2PPD8 638 aa24.27■■□□□ 1.48
TCF3-214ENST00000590605 PLCH2O75038 1416 aa24.26■■□□□ 1.47
TCF3-214ENST00000590605 CD109Q6YHK3 1445 aa24.26■■□□□ 1.47
TCF3-214ENST00000590605 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
TCF3-214ENST00000590605 MYOM3Q5VTT5 1437 aa24.25■■□□□ 1.47
TCF3-214ENST00000590605 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
TCF3-214ENST00000590605 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms