RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 IGF1RP08069 1367 aa13.17□□□□□ -0.3
NPC1-208ENST00000590301 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
NPC1-208ENST00000590301 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
NPC1-208ENST00000590301 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
NPC1-208ENST00000590301 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
NPC1-208ENST00000590301 KIAA0586Q9BVV6 1533 aa13.1□□□□□ -0.31
NPC1-208ENST00000590301 CUL7Q14999 1698 aa13.08□□□□□ -0.31
NPC1-208ENST00000590301 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.31
NPC1-208ENST00000590301 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
NPC1-208ENST00000590301 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
NPC1-208ENST00000590301 CARMIL2Q6F5E8 1435 aa12.99□□□□□ -0.33
NPC1-208ENST00000590301 RAPGEF2Q9Y4G8 1499 aa12.97□□□□□ -0.33
NPC1-208ENST00000590301 PTPRGP23470 1445 aa12.96□□□□□ -0.34
NPC1-208ENST00000590301 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
NPC1-208ENST00000590301 MAPKBP1O60336 1514 aa12.93□□□□□ -0.34
NPC1-208ENST00000590301 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
NPC1-208ENST00000590301 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
NPC1-208ENST00000590301 ADCY10Q96PN6 1610 aa12.89□□□□□ -0.35
NPC1-208ENST00000590301 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
NPC1-208ENST00000590301 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
NPC1-208ENST00000590301 UHRF1BP1LA0JNW5 1464 aa12.88□□□□□ -0.35
NPC1-208ENST00000590301 DISP1Q96F81 1524 aa12.88□□□□□ -0.35
NPC1-208ENST00000590301 ABCC2Q92887 1545 aa12.87□□□□□ -0.35
NPC1-208ENST00000590301 PRXQ9BXM0 1461 aa12.86□□□□□ -0.35
NPC1-208ENST00000590301 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
NPC1-208ENST00000590301 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
NPC1-208ENST00000590301 TTBK1Q5TCY1 1321 aaPredicted RBP12.84□□□□□ -0.35
NPC1-208ENST00000590301 GOLGA3Q08378 1498 aa12.83□□□□□ -0.36
NPC1-208ENST00000590301 PLB1Q6P1J6 1458 aa12.83□□□□□ -0.36
NPC1-208ENST00000590301 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
NPC1-208ENST00000590301 EEA1Q15075 1411 aa12.81□□□□□ -0.36
NPC1-208ENST00000590301 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
NPC1-208ENST00000590301 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
NPC1-208ENST00000590301 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
NPC1-208ENST00000590301 KDM5BQ9UGL1 1544 aa12.79□□□□□ -0.36
NPC1-208ENST00000590301 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
NPC1-208ENST00000590301 KIF13AQ9H1H9 1805 aa12.77□□□□□ -0.37
NPC1-208ENST00000590301 GLI2P10070 1586 aa12.75□□□□□ -0.37
NPC1-208ENST00000590301 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
NPC1-208ENST00000590301 CTTNBP2Q8WZ74 1663 aa12.71□□□□□ -0.37
NPC1-208ENST00000590301 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
NPC1-208ENST00000590301 ABCA8O94911 1581 aa12.69□□□□□ -0.38
NPC1-208ENST00000590301 KDM6BO15054 1643 aa12.69□□□□□ -0.38
NPC1-208ENST00000590301 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
NPC1-208ENST00000590301 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
NPC1-208ENST00000590301 P3H3Q8IVL6 736 aa12.63□□□□□ -0.39
NPC1-208ENST00000590301 SAMD9Q5K651 1589 aa12.63□□□□□ -0.39
NPC1-208ENST00000590301 MAP3K4Q9Y6R4 1608 aa12.62□□□□□ -0.39
NPC1-208ENST00000590301 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
NPC1-208ENST00000590301 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
NPC1-208ENST00000590301 ATP10BO94823 1461 aa12.61□□□□□ -0.39
NPC1-208ENST00000590301 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
NPC1-208ENST00000590301 KIF21BO75037 1637 aa12.59□□□□□ -0.39
NPC1-208ENST00000590301 EFCAB5A4FU69 1503 aa12.58□□□□□ -0.4
NPC1-208ENST00000590301 PPRC1Q5VV67 1664 aaKnown RBP12.58□□□□□ -0.4
NPC1-208ENST00000590301 COL17A1Q9UMD9 1497 aaPredicted RBP12.58□□□□□ -0.4
NPC1-208ENST00000590301 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
NPC1-208ENST00000590301 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
NPC1-208ENST00000590301 TSPOAP1O95153 1857 aa12.56□□□□□ -0.4
NPC1-208ENST00000590301 FHOD3Q2V2M9 1422 aa12.55□□□□□ -0.4
NPC1-208ENST00000590301 NUP153P49790 1475 aaKnown RBP12.54□□□□□ -0.4
NPC1-208ENST00000590301 KDM4FA0A1W2PPD8 638 aa12.54□□□□□ -0.4
NPC1-208ENST00000590301 ARID3CA6NKF2 412 aa12.54□□□□□ -0.4
NPC1-208ENST00000590301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
NPC1-208ENST00000590301 MSH5O43196 834 aa12.54□□□□□ -0.4
NPC1-208ENST00000590301 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
NPC1-208ENST00000590301 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
NPC1-208ENST00000590301 RAPGEF6Q8TEU7 1601 aa12.54□□□□□ -0.4
NPC1-208ENST00000590301 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
NPC1-208ENST00000590301 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
NPC1-208ENST00000590301 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
NPC1-208ENST00000590301 ADRA2BP18089 450 aa12.51□□□□□ -0.41
NPC1-208ENST00000590301 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
NPC1-208ENST00000590301 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
NPC1-208ENST00000590301 ABCA9Q8IUA7 1624 aa12.49□□□□□ -0.41
NPC1-208ENST00000590301 NEO1Q92859 1461 aa12.49□□□□□ -0.41
NPC1-208ENST00000590301 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
NPC1-208ENST00000590301 ADGRL1O94910 1474 aa12.46□□□□□ -0.41
NPC1-208ENST00000590301 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
NPC1-208ENST00000590301 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
NPC1-208ENST00000590301 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
NPC1-208ENST00000590301 RAPGEF3O95398 923 aa12.4□□□□□ -0.42
NPC1-208ENST00000590301 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
NPC1-208ENST00000590301 FANCAO15360 1455 aa12.4□□□□□ -0.43
NPC1-208ENST00000590301 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
NPC1-208ENST00000590301 DENND4BO75064 1496 aaPredicted RBP12.39□□□□□ -0.43
NPC1-208ENST00000590301 AKNAQ7Z591 1439 aa12.38□□□□□ -0.43
NPC1-208ENST00000590301 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
NPC1-208ENST00000590301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.38□□□□□ -0.43
NPC1-208ENST00000590301 PLCH2O75038 1416 aa12.37□□□□□ -0.43
NPC1-208ENST00000590301 CLIP1P30622 1438 aa12.37□□□□□ -0.43
NPC1-208ENST00000590301 CFAP74Q9C0B2 1584 aa12.36□□□□□ -0.43
NPC1-208ENST00000590301 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
NPC1-208ENST00000590301 EFCAB2Q5VUJ9 269 aa12.35□□□□□ -0.43
NPC1-208ENST00000590301 CASKIN1Q8WXD9 1431 aa12.35□□□□□ -0.43
NPC1-208ENST00000590301 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
NPC1-208ENST00000590301 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
NPC1-208ENST00000590301 TTC37Q6PGP7 1564 aa12.33□□□□□ -0.44
NPC1-208ENST00000590301 FRMPD1Q5SYB0 1578 aa12.32□□□□□ -0.44
NPC1-208ENST00000590301 SCAPERQ9BY12 1400 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms