RNA–Protein interactions for RNA: ENST00000589123.5

NFIC-206, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 8,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-206ENST00000589123 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
NFIC-206ENST00000589123 HNRNPUQ00839 825 aaKnown RBP eCLIP18.49■□□□□ 0.55
NFIC-206ENST00000589123 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
NFIC-206ENST00000589123 TNNT3P45378 269 aaPredicted RBP18.46■□□□□ 0.55
NFIC-206ENST00000589123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
NFIC-206ENST00000589123 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
NFIC-206ENST00000589123 TMC1Q8TDI8 760 aa18.45■□□□□ 0.54
NFIC-206ENST00000589123 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
NFIC-206ENST00000589123 GOLGA6L22H0YM25 854 aa18.43■□□□□ 0.54
NFIC-206ENST00000589123 RTN4Q9NQC3 1192 aaKnown RBP18.42■□□□□ 0.54
NFIC-206ENST00000589123 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
NFIC-206ENST00000589123 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
NFIC-206ENST00000589123 BECN1Q14457 450 aa18.35■□□□□ 0.53
NFIC-206ENST00000589123 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
NFIC-206ENST00000589123 CHAF1AQ13111 956 aaPredicted RBP18.33■□□□□ 0.52
NFIC-206ENST00000589123 KDM2AQ9Y2K7 1162 aa18.31■□□□□ 0.52
NFIC-206ENST00000589123 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
NFIC-206ENST00000589123 FGD1P98174 961 aa18.31■□□□□ 0.52
NFIC-206ENST00000589123 DDRGK1Q96HY6 314 aa18.29■□□□□ 0.52
NFIC-206ENST00000589123 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
NFIC-206ENST00000589123 LMOD2Q6P5Q4 547 aa18.28■□□□□ 0.52
NFIC-206ENST00000589123 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
NFIC-206ENST00000589123 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
NFIC-206ENST00000589123 PPM1GO15355 546 aaPredicted RBP18.26■□□□□ 0.51
NFIC-206ENST00000589123 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
NFIC-206ENST00000589123 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
NFIC-206ENST00000589123 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
NFIC-206ENST00000589123 PTMSP20962 102 aa18.22■□□□□ 0.51
NFIC-206ENST00000589123 PDE4CQ08493 712 aa18.21■□□□□ 0.51
NFIC-206ENST00000589123 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.51
NFIC-206ENST00000589123 KRI1Q8N9T8 703 aaKnown RBP18.2■□□□□ 0.5
NFIC-206ENST00000589123 NOC3LQ8WTT2 800 aaKnown RBP18.2■□□□□ 0.5
NFIC-206ENST00000589123 NRDCO43847 1150 aa18.19■□□□□ 0.5
NFIC-206ENST00000589123 KCNJ4P48050 445 aa18.19■□□□□ 0.5
NFIC-206ENST00000589123 OS9Q13438 667 aaPredicted RBP18.18■□□□□ 0.5
NFIC-206ENST00000589123 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
NFIC-206ENST00000589123 MSNP26038 577 aaKnown RBP18.16■□□□□ 0.5
NFIC-206ENST00000589123 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
NFIC-206ENST00000589123 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
NFIC-206ENST00000589123 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
NFIC-206ENST00000589123 MRS2Q9HD23 443 aa18.12■□□□□ 0.49
NFIC-206ENST00000589123 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
NFIC-206ENST00000589123 ANO8Q9HCE9 1232 aaPredicted RBP18.11■□□□□ 0.49
NFIC-206ENST00000589123 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
NFIC-206ENST00000589123 DRC7Q8IY82 874 aa18.11■□□□□ 0.49
NFIC-206ENST00000589123 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
NFIC-206ENST00000589123 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
NFIC-206ENST00000589123 SENP3-EIF4A1A0A087X0R7 540 aa18.09■□□□□ 0.49
NFIC-206ENST00000589123 SETQ01105 290 aaPredicted RBP18.09■□□□□ 0.49
NFIC-206ENST00000589123 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
NFIC-206ENST00000589123 A0A0U1RQG5 324 aaPredicted RBP18.04■□□□□ 0.48
NFIC-206ENST00000589123 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
NFIC-206ENST00000589123 GNL2Q13823 731 aaKnown RBP18.04■□□□□ 0.48
NFIC-206ENST00000589123 ARID3AQ99856 593 aa18.01■□□□□ 0.47
NFIC-206ENST00000589123 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
NFIC-206ENST00000589123 APPP05067 770 aa18■□□□□ 0.47
NFIC-206ENST00000589123 GOLGA6L1Q8N7Z2 621 aa18■□□□□ 0.47
NFIC-206ENST00000589123 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
NFIC-206ENST00000589123 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
NFIC-206ENST00000589123 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
NFIC-206ENST00000589123 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
NFIC-206ENST00000589123 WWC1Q8IX03 1113 aa17.91■□□□□ 0.46
NFIC-206ENST00000589123 TMX4Q9H1E5 349 aaPredicted RBP17.91■□□□□ 0.46
NFIC-206ENST00000589123 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
NFIC-206ENST00000589123 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
NFIC-206ENST00000589123 RGS3P49796 1198 aa17.89■□□□□ 0.45
NFIC-206ENST00000589123 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.454e-7■■■■□ 22.7
NFIC-206ENST00000589123 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
NFIC-206ENST00000589123 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
NFIC-206ENST00000589123 SOX12O15370 315 aa17.88■□□□□ 0.45
NFIC-206ENST00000589123 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
NFIC-206ENST00000589123 CREBRFQ8IUR6 639 aa17.85■□□□□ 0.45
NFIC-206ENST00000589123 SPRYD3Q8NCJ5 442 aa17.85■□□□□ 0.45
NFIC-206ENST00000589123 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
NFIC-206ENST00000589123 HSP90AA2PQ14568 343 aaPredicted RBP17.84■□□□□ 0.45
NFIC-206ENST00000589123 CEP89Q96ST8 783 aa17.84■□□□□ 0.45
NFIC-206ENST00000589123 G3V3G9 751 aa17.83■□□□□ 0.44
NFIC-206ENST00000589123 DEKP35659 375 aaKnown RBP17.83■□□□□ 0.44
NFIC-206ENST00000589123 DCAF8Q5TAQ9 597 aa17.83■□□□□ 0.44
NFIC-206ENST00000589123 KNSTRNQ9Y448 316 aa17.82■□□□□ 0.44
NFIC-206ENST00000589123 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
NFIC-206ENST00000589123 POGKQ9P215 609 aa17.81■□□□□ 0.44
NFIC-206ENST00000589123 NOP58Q9Y2X3 529 aaKnown RBP17.8■□□□□ 0.44
NFIC-206ENST00000589123 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
NFIC-206ENST00000589123 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
NFIC-206ENST00000589123 MCCP23508 829 aa17.79■□□□□ 0.44
NFIC-206ENST00000589123 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
NFIC-206ENST00000589123 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
NFIC-206ENST00000589123 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
NFIC-206ENST00000589123 RASSF8Q8NHQ8 419 aa17.76■□□□□ 0.43
NFIC-206ENST00000589123 STK11IPQ8N1F8 1099 aa17.75■□□□□ 0.43
NFIC-206ENST00000589123 VSIG10Q8N0Z9 540 aa17.74■□□□□ 0.43
NFIC-206ENST00000589123 APBB1O00213 710 aa17.73■□□□□ 0.43
NFIC-206ENST00000589123 HSP90B1P14625 803 aaKnown RBP17.73■□□□□ 0.43
NFIC-206ENST00000589123 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
NFIC-206ENST00000589123 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
NFIC-206ENST00000589123 KIAA1211Q6ZU35 1233 aa17.72■□□□□ 0.43
NFIC-206ENST00000589123 RRP12Q5JTH9 1297 aaKnown RBP17.7■□□□□ 0.42
NFIC-206ENST00000589123 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
NFIC-206ENST00000589123 MARCH6O60337 910 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms