RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 NAP1L5Q96NT1 182 aaPredicted RBP14.21□□□□□ -0.14
LSM14A-206ENST00000588582 MRS2Q9HD23 443 aa14.21□□□□□ -0.14
LSM14A-206ENST00000588582 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
LSM14A-206ENST00000588582 PPM1GO15355 546 aaPredicted RBP14.13□□□□□ -0.15
LSM14A-206ENST00000588582 SLC4A3P48751 1232 aa14.12□□□□□ -0.15
LSM14A-206ENST00000588582 RB1CC1Q8TDY2 1594 aa14.12□□□□□ -0.15
LSM14A-206ENST00000588582 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
LSM14A-206ENST00000588582 A0A0U1RQG5 324 aaPredicted RBP14.11□□□□□ -0.15
LSM14A-206ENST00000588582 PODXL2Q9NZ53 605 aa14.11□□□□□ -0.15
LSM14A-206ENST00000588582 DHX57Q6P158 1386 aaKnown RBP14.11□□□□□ -0.15
LSM14A-206ENST00000588582 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
LSM14A-206ENST00000588582 CLIP1P30622 1438 aa14.09□□□□□ -0.15
LSM14A-206ENST00000588582 SOGA1O94964 1423 aa14.08□□□□□ -0.16
LSM14A-206ENST00000588582 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
LSM14A-206ENST00000588582 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
LSM14A-206ENST00000588582 GSE1Q14687 1217 aa14.05□□□□□ -0.16
LSM14A-206ENST00000588582 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
LSM14A-206ENST00000588582 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.17
LSM14A-206ENST00000588582 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.17
LSM14A-206ENST00000588582 ARID3AQ99856 593 aa14.01□□□□□ -0.17
LSM14A-206ENST00000588582 KANK4Q5T7N3 995 aaPredicted RBP14.01□□□□□ -0.17
LSM14A-206ENST00000588582 HSP90AA2PQ14568 343 aaPredicted RBP14□□□□□ -0.17
LSM14A-206ENST00000588582 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
LSM14A-206ENST00000588582 ZMYND15Q9H091 742 aa13.98□□□□□ -0.17
LSM14A-206ENST00000588582 HSP90AA1P07900 732 aaKnown RBP13.98□□□□□ -0.17
LSM14A-206ENST00000588582 PPP1R15AO75807 674 aaPredicted RBP13.95□□□□□ -0.18
LSM14A-206ENST00000588582 DDRGK1Q96HY6 314 aa13.95□□□□□ -0.18
LSM14A-206ENST00000588582 PNNQ9H307 717 aaKnown RBP13.95□□□□□ -0.18
LSM14A-206ENST00000588582 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
LSM14A-206ENST00000588582 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
LSM14A-206ENST00000588582 USP35Q9P2H5 1018 aa13.94□□□□□ -0.18
LSM14A-206ENST00000588582 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
LSM14A-206ENST00000588582 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
LSM14A-206ENST00000588582 PDE4AP27815 886 aa13.91□□□□□ -0.18
LSM14A-206ENST00000588582 NFKBIBQ15653 356 aa13.91□□□□□ -0.18
LSM14A-206ENST00000588582 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
LSM14A-206ENST00000588582 TMC1Q8TDI8 760 aa13.9□□□□□ -0.18
LSM14A-206ENST00000588582 RGS3P49796 1198 aa13.89□□□□□ -0.19
LSM14A-206ENST00000588582 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
LSM14A-206ENST00000588582 CCDC184Q52MB2 194 aa13.89□□□□□ -0.19
LSM14A-206ENST00000588582 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
LSM14A-206ENST00000588582 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
LSM14A-206ENST00000588582 RUSC2Q8N2Y8 1516 aa13.87□□□□□ -0.19
LSM14A-206ENST00000588582 SLKQ9H2G2 1235 aaPredicted RBP13.87□□□□□ -0.19
LSM14A-206ENST00000588582 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
LSM14A-206ENST00000588582 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.191e-21■■■□□ 15
LSM14A-206ENST00000588582 SKAP1Q86WV1 359 aa13.84□□□□□ -0.19
LSM14A-206ENST00000588582 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
LSM14A-206ENST00000588582 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
LSM14A-206ENST00000588582 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
LSM14A-206ENST00000588582 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
LSM14A-206ENST00000588582 TRIM44Q96DX7 344 aaPredicted RBP13.82□□□□□ -0.2
LSM14A-206ENST00000588582 CCNB3Q8WWL7 1395 aa13.82□□□□□ -0.2
LSM14A-206ENST00000588582 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
LSM14A-206ENST00000588582 AKNAQ7Z591 1439 aa13.79□□□□□ -0.2
LSM14A-206ENST00000588582 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
LSM14A-206ENST00000588582 FAM43AQ8N2R8 423 aa13.77□□□□□ -0.21
LSM14A-206ENST00000588582 NUDCQ9Y266 331 aa13.77□□□□□ -0.21
LSM14A-206ENST00000588582 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
LSM14A-206ENST00000588582 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
LSM14A-206ENST00000588582 PLIN1O60240 522 aa13.76□□□□□ -0.21
LSM14A-206ENST00000588582 ABCC9O60706 1549 aa13.75□□□□□ -0.21
LSM14A-206ENST00000588582 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
LSM14A-206ENST00000588582 WASHC2AQ641Q2 1341 aa13.74□□□□□ -0.21
LSM14A-206ENST00000588582 EEA1Q15075 1411 aa13.74□□□□□ -0.21
LSM14A-206ENST00000588582 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
LSM14A-206ENST00000588582 L1TD1Q5T7N2 865 aaKnown RBP13.72□□□□□ -0.21
LSM14A-206ENST00000588582 PRKRIP1Q9H875 184 aaPredicted RBP13.71□□□□□ -0.21
LSM14A-206ENST00000588582 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
LSM14A-206ENST00000588582 RCAN3Q9UKA8 241 aa13.69□□□□□ -0.22
LSM14A-206ENST00000588582 SETD5Q9C0A6 1442 aa13.69□□□□□ -0.22
LSM14A-206ENST00000588582 CANXP27824 592 aaKnown RBP13.69□□□□□ -0.22
LSM14A-206ENST00000588582 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
LSM14A-206ENST00000588582 RRP7BPQ9NSQ0 103 aa13.68□□□□□ -0.22
LSM14A-206ENST00000588582 POGKQ9P215 609 aa13.68□□□□□ -0.22
LSM14A-206ENST00000588582 ANP32BQ92688 251 aaKnown RBP13.68□□□□□ -0.22
LSM14A-206ENST00000588582 BACH2Q9BYV9 841 aa13.68□□□□□ -0.22
LSM14A-206ENST00000588582 GOLGA6L3A6NEY3 463 aa13.68□□□□□ -0.22
LSM14A-206ENST00000588582 BECN1Q14457 450 aa13.67□□□□□ -0.22
LSM14A-206ENST00000588582 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
LSM14A-206ENST00000588582 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
LSM14A-206ENST00000588582 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
LSM14A-206ENST00000588582 ARID3CA6NKF2 412 aa13.65□□□□□ -0.22
LSM14A-206ENST00000588582 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
LSM14A-206ENST00000588582 FOXD1Q16676 465 aa13.64□□□□□ -0.23
LSM14A-206ENST00000588582 FAM13BQ9NYF5 915 aa13.64□□□□□ -0.23
LSM14A-206ENST00000588582 RRAGDQ9NQL2 400 aaPredicted RBP13.63□□□□□ -0.23
LSM14A-206ENST00000588582 RRP9O43818 475 aaKnown RBP13.62□□□□□ -0.23
LSM14A-206ENST00000588582 RRP1P56182 461 aaKnown RBP13.62□□□□□ -0.23
LSM14A-206ENST00000588582 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
LSM14A-206ENST00000588582 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
LSM14A-206ENST00000588582 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
LSM14A-206ENST00000588582 NACADO15069 1562 aa13.59□□□□□ -0.23
LSM14A-206ENST00000588582 NCLP19338 710 aaKnown RBP13.57□□□□□ -0.24
LSM14A-206ENST00000588582 RAPGEF2Q9Y4G8 1499 aa13.56□□□□□ -0.24
LSM14A-206ENST00000588582 MS4A1P11836 297 aa13.56□□□□□ -0.24
LSM14A-206ENST00000588582 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
LSM14A-206ENST00000588582 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
LSM14A-206ENST00000588582 MSNP26038 577 aaKnown RBP13.53□□□□□ -0.24
LSM14A-206ENST00000588582 PRDM10Q9NQV6 1147 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms