RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	GRIN2B	Q13224	1484 aa		14.04	□□□□□ -0.16
CACNA2D4-223	ENST00000588077	EIF4G3	O43432	1585 aa	Known RBP	14.04	□□□□□ -0.16
CACNA2D4-223	ENST00000588077	IGF1R	P08069	1367 aa		14.01	□□□□□ -0.17
CACNA2D4-223	ENST00000588077	SNAPC4	Q5SXM2	1469 aa		14	□□□□□ -0.17
CACNA2D4-223	ENST00000588077	WDR97	A6NE52	1622 aa		13.99	□□□□□ -0.17
CACNA2D4-223	ENST00000588077	EEA1	Q15075	1411 aa		13.98	□□□□□ -0.17
CACNA2D4-223	ENST00000588077	ABCA5	Q8WWZ7	1642 aa		13.98	□□□□□ -0.17
CACNA2D4-223	ENST00000588077	CARMIL1	Q5VZK9	1371 aa		13.98	□□□□□ -0.17
CACNA2D4-223	ENST00000588077	ERICH3	Q5RHP9	1530 aa		13.94	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.94	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	FHAD1	B1AJZ9	1412 aa		13.93	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	UBTF	P17480	764 aa	Known RBP	13.93	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	PBRM1	Q86U86	1689 aa		13.92	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	OSCAR	Q8IYS5	282 aa		13.91	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.9	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	SYNJ2	O15056	1496 aa		13.9	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	RANGAP1	P46060	587 aa	Predicted RBP	13.9	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	TSHZ2	Q9NRE2	1034 aa		13.9	□□□□□ -0.18
CACNA2D4-223	ENST00000588077	RAPGEF2	Q9Y4G8	1499 aa		13.88	□□□□□ -0.19
CACNA2D4-223	ENST00000588077	ADAMTS12	P58397	1594 aa		13.86	□□□□□ -0.19
CACNA2D4-223	ENST00000588077	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.85	□□□□□ -0.19
CACNA2D4-223	ENST00000588077	GRIN2A	Q12879	1464 aa		13.85	□□□□□ -0.19
CACNA2D4-223	ENST00000588077	CUL7	Q14999	1698 aa		13.85	□□□□□ -0.19
CACNA2D4-223	ENST00000588077	SLC24A1	O60721	1099 aa		13.85	□□□□□ -0.19
CACNA2D4-223	ENST00000588077	PRX	Q9BXM0	1461 aa		13.84	□□□□□ -0.19
CACNA2D4-223	ENST00000588077	CHD1	O14646	1710 aa		13.8	□□□□□ -0.2
CACNA2D4-223	ENST00000588077	GOLGA3	Q08378	1498 aa		13.79	□□□□□ -0.2
CACNA2D4-223	ENST00000588077	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.76	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	BCAN	Q96GW7	911 aa		13.76	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	JPH4	Q96JJ6	628 aa		13.75	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	KIF21B	O75037	1637 aa		13.74	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	NUP160	Q12769	1436 aa		13.73	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	TNIK	Q9UKE5	1360 aa		13.73	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	P3H3	Q8IVL6	736 aa		13.73	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	CEP170	Q5SW79	1584 aa		13.72	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	KIAA0586	Q9BVV6	1533 aa		13.72	□□□□□ -0.21
CACNA2D4-223	ENST00000588077	EIF5B	O60841	1220 aa	Known RBP	13.68	□□□□□ -0.22
CACNA2D4-223	ENST00000588077	CEP162	Q5TB80	1403 aa		13.68	□□□□□ -0.22
CACNA2D4-223	ENST00000588077	PRG4	Q92954	1404 aa	Predicted RBP	13.66	□□□□□ -0.22
CACNA2D4-223	ENST00000588077	IQGAP2	Q13576	1575 aa		13.66	□□□□□ -0.22
CACNA2D4-223	ENST00000588077	DNAJC5	Q9H3Z4	198 aa		13.64	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	CARMIL2	Q6F5E8	1435 aa		13.64	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	CLASP1	Q7Z460	1538 aa		13.63	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	UBE2Q2	Q8WVN8	375 aa		13.62	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	CYB5RL	Q6IPT4	315 aa		13.61	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.61	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	CTTNBP2	Q8WZ74	1663 aa		13.6	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	KCNH8	Q96L42	1107 aa		13.6	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	CLIP1	P30622	1438 aa		13.6	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	CLSPN	Q9HAW4	1339 aa		13.6	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	CCDC136	Q96JN2	1154 aa		13.59	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	SALL2	Q9Y467	1007 aa	Predicted RBP	13.59	□□□□□ -0.23
CACNA2D4-223	ENST00000588077	PTPRG	P23470	1445 aa		13.56	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	ARHGEF11	O15085	1522 aa		13.56	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	FHOD3	Q2V2M9	1422 aa		13.56	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	UGGT2	Q9NYU1	1516 aa		13.55	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	FKBP8	Q14318	412 aa		13.55	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	RBM19	Q9Y4C8	960 aa	Known RBP	13.55	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	ERCC6L2	Q5T890	1561 aa		13.55	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	ARID3C	A6NKF2	412 aa		13.54	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	ITGAE	P38570	1179 aa		13.53	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	DISP1	Q96F81	1524 aa		13.53	□□□□□ -0.24
CACNA2D4-223	ENST00000588077	SHROOM2	Q13796	1616 aa		13.51	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	ARHGAP35	Q9NRY4	1499 aa		13.51	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	KIAA0556	O60303	1618 aa		13.49	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	EFCAB5	A4FU69	1503 aa		13.49	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	MSH5	O43196	834 aa		13.49	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	NPM1	P06748	294 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	RIMBP3C	A6NJZ7	1639 aa		13.49	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	RIMBP3B	A6NNM3	1639 aa		13.49	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	RIMBP3	Q9UFD9	1639 aa		13.49	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	ARAP1	Q96P48	1450 aa		13.46	□□□□□ -0.25
CACNA2D4-223	ENST00000588077	DEK	P35659	375 aa	Known RBP	13.46	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	FMN1	Q68DA7	1419 aa		13.45	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	DAXX	Q9UER7	740 aa	Predicted RBP	13.45	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	SAMD9	Q5K651	1589 aa		13.45	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	PLB1	Q6P1J6	1458 aa		13.43	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	UACA	Q9BZF9	1416 aa		13.43	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	PLEKHG5	O94827	1062 aa		13.42	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	VPS8	Q8N3P4	1428 aa		13.42	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	MYT1L	Q9UL68	1186 aa		13.41	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.4	□□□□□ -0.26
CACNA2D4-223	ENST00000588077	ERICH6B	Q5W0A0	696 aa		13.38	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	PKNOX2	Q96KN3	472 aa		13.38	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	PLEKHD1	A6NEE1	506 aa		13.34	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	NEFL	P07196	543 aa		13.34	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	TRIM52	Q96A61	297 aa		13.34	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	CASKIN1	Q8WXD9	1431 aa		13.34	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	ABCC2	Q92887	1545 aa		13.33	□□□□□ -0.27
CACNA2D4-223	ENST00000588077	DHX57	Q6P158	1386 aa	Known RBP	13.33	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	RAPGEF6	Q8TEU7	1601 aa		13.33	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	ABCA8	O94911	1581 aa		13.32	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	TRH	P20396	242 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	NUP153	P49790	1475 aa	Known RBP	13.31	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	PCF11	O94913	1555 aa	Known RBP	13.31	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	PODXL2	Q9NZ53	605 aa		13.31	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	UHRF1BP1L	A0JNW5	1464 aa		13.3	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	FYCO1	Q9BQS8	1478 aa		13.3	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	ADCY10	Q96PN6	1610 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms