RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
NEDD4L-221ENST00000588066 THOC2Q8NI27 1593 aaKnown RBP13.55□□□□□ -0.24
NEDD4L-221ENST00000588066 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
NEDD4L-221ENST00000588066 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
NEDD4L-221ENST00000588066 DNAJC5Q9H3Z4 198 aa13.53□□□□□ -0.24
NEDD4L-221ENST00000588066 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
NEDD4L-221ENST00000588066 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.25
NEDD4L-221ENST00000588066 EFCAB5A4FU69 1503 aa13.52□□□□□ -0.25
NEDD4L-221ENST00000588066 CTTNBP2Q8WZ74 1663 aa13.52□□□□□ -0.25
NEDD4L-221ENST00000588066 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■■□□ 15.8
NEDD4L-221ENST00000588066 MSH5O43196 834 aa13.49□□□□□ -0.25
NEDD4L-221ENST00000588066 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
NEDD4L-221ENST00000588066 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
NEDD4L-221ENST00000588066 HRCP23327 699 aa13.45□□□□□ -0.26
NEDD4L-221ENST00000588066 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
NEDD4L-221ENST00000588066 MAGI1Q96QZ7 1491 aaPredicted RBP13.43□□□□□ -0.26
NEDD4L-221ENST00000588066 EIF4G3O43432 1585 aaKnown RBP13.43□□□□□ -0.26
NEDD4L-221ENST00000588066 MAP3K1Q13233 1512 aa13.43□□□□□ -0.26
NEDD4L-221ENST00000588066 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
NEDD4L-221ENST00000588066 ZEB1P37275 1124 aaPredicted RBP13.4□□□□□ -0.26
NEDD4L-221ENST00000588066 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
NEDD4L-221ENST00000588066 TTBK1Q5TCY1 1321 aaPredicted RBP13.38□□□□□ -0.27
NEDD4L-221ENST00000588066 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
NEDD4L-221ENST00000588066 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
NEDD4L-221ENST00000588066 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
NEDD4L-221ENST00000588066 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
NEDD4L-221ENST00000588066 CHMP7Q8WUX9 453 aaPredicted RBP13.36□□□□□ -0.27
NEDD4L-221ENST00000588066 CASKIN1Q8WXD9 1431 aa13.36□□□□□ -0.27
NEDD4L-221ENST00000588066 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
NEDD4L-221ENST00000588066 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
NEDD4L-221ENST00000588066 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
NEDD4L-221ENST00000588066 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
NEDD4L-221ENST00000588066 TIAM1Q13009 1591 aa13.33□□□□□ -0.28
NEDD4L-221ENST00000588066 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
NEDD4L-221ENST00000588066 PCF11O94913 1555 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-221ENST00000588066 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-221ENST00000588066 CFAP43Q8NDM7 1665 aa13.3□□□□□ -0.28
NEDD4L-221ENST00000588066 KANK4Q5T7N3 995 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-221ENST00000588066 FBLN2P98095 1184 aa13.27□□□□□ -0.29
NEDD4L-221ENST00000588066 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.29
NEDD4L-221ENST00000588066 CCDC18Q5T9S5 1454 aa13.25□□□□□ -0.29
NEDD4L-221ENST00000588066 NUP160Q12769 1436 aa13.25□□□□□ -0.29
NEDD4L-221ENST00000588066 CARMIL2Q6F5E8 1435 aa13.24□□□□□ -0.29
NEDD4L-221ENST00000588066 RRBP1Q9P2E9 1410 aaKnown RBP13.24□□□□□ -0.29
NEDD4L-221ENST00000588066 HECW1Q76N89 1606 aa13.23□□□□□ -0.29
NEDD4L-221ENST00000588066 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
NEDD4L-221ENST00000588066 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.29
NEDD4L-221ENST00000588066 KIAA0556O60303 1618 aa13.21□□□□□ -0.29
NEDD4L-221ENST00000588066 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
NEDD4L-221ENST00000588066 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
NEDD4L-221ENST00000588066 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-221ENST00000588066 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
NEDD4L-221ENST00000588066 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
NEDD4L-221ENST00000588066 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
NEDD4L-221ENST00000588066 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
NEDD4L-221ENST00000588066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.32e-19■■■■■ 288.6
NEDD4L-221ENST00000588066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.14□□□□□ -0.31
NEDD4L-221ENST00000588066 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
NEDD4L-221ENST00000588066 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
NEDD4L-221ENST00000588066 CHD1O14646 1710 aa13.12□□□□□ -0.31
NEDD4L-221ENST00000588066 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
NEDD4L-221ENST00000588066 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
NEDD4L-221ENST00000588066 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
NEDD4L-221ENST00000588066 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
NEDD4L-221ENST00000588066 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
NEDD4L-221ENST00000588066 MYOM3Q5VTT5 1437 aa13.07□□□□□ -0.32
NEDD4L-221ENST00000588066 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
NEDD4L-221ENST00000588066 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
NEDD4L-221ENST00000588066 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
NEDD4L-221ENST00000588066 NUP153P49790 1475 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-221ENST00000588066 PTPRGP23470 1445 aa13.05□□□□□ -0.32
NEDD4L-221ENST00000588066 CDK13Q14004 1512 aaKnown RBP13.04□□□□□ -0.32
NEDD4L-221ENST00000588066 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
NEDD4L-221ENST00000588066 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
NEDD4L-221ENST00000588066 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
NEDD4L-221ENST00000588066 ABCA8O94911 1581 aa13.03□□□□□ -0.32
NEDD4L-221ENST00000588066 ITGAEP38570 1179 aa13.02□□□□□ -0.33
NEDD4L-221ENST00000588066 TROQ12816 1431 aaPredicted RBP13.01□□□□□ -0.33
NEDD4L-221ENST00000588066 MAGI3Q5TCQ9 1506 aa13□□□□□ -0.33
NEDD4L-221ENST00000588066 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
NEDD4L-221ENST00000588066 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
NEDD4L-221ENST00000588066 PLEKHD1A6NEE1 506 aa13□□□□□ -0.33
NEDD4L-221ENST00000588066 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
NEDD4L-221ENST00000588066 TCOF1Q13428 1488 aaKnown RBP12.98□□□□□ -0.33
NEDD4L-221ENST00000588066 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
NEDD4L-221ENST00000588066 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
NEDD4L-221ENST00000588066 ARID3CA6NKF2 412 aa12.97□□□□□ -0.33
NEDD4L-221ENST00000588066 UACAQ9BZF9 1416 aa12.96□□□□□ -0.33
NEDD4L-221ENST00000588066 ADCY10Q96PN6 1610 aa12.95□□□□□ -0.34
NEDD4L-221ENST00000588066 ITSN2Q9NZM3 1697 aa12.94□□□□□ -0.34
NEDD4L-221ENST00000588066 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-221ENST00000588066 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
NEDD4L-221ENST00000588066 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
NEDD4L-221ENST00000588066 ATP10BO94823 1461 aa12.93□□□□□ -0.34
NEDD4L-221ENST00000588066 KIF14Q15058 1648 aa12.91□□□□□ -0.34
NEDD4L-221ENST00000588066 AKNAQ7Z591 1439 aa12.9□□□□□ -0.34
NEDD4L-221ENST00000588066 ABCC2Q92887 1545 aa12.9□□□□□ -0.34
NEDD4L-221ENST00000588066 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
NEDD4L-221ENST00000588066 UHRF1BP1LA0JNW5 1464 aa12.9□□□□□ -0.34
NEDD4L-221ENST00000588066 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms