RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 ERCC6L2Q5T890 1561 aa34.29■■■■□ 3.08
LDLRAD4-212ENST00000587905 RAPGEF2Q9Y4G8 1499 aa34.28■■■■□ 3.08
LDLRAD4-212ENST00000587905 JPH4Q96JJ6 628 aa34.24■■■■□ 3.07
LDLRAD4-212ENST00000587905 KIAA0586Q9BVV6 1533 aa34.24■■■■□ 3.07
LDLRAD4-212ENST00000587905 PRG4Q92954 1404 aaPredicted RBP34.21■■■■□ 3.07
LDLRAD4-212ENST00000587905 FAM9AQ8IZU1 332 aaPredicted RBP34.15■■■■□ 3.06
LDLRAD4-212ENST00000587905 CSRNP3Q8WYN3 585 aa34.13■■■■□ 3.05
LDLRAD4-212ENST00000587905 PRXQ9BXM0 1461 aa34.12■■■■□ 3.05
LDLRAD4-212ENST00000587905 EEA1Q15075 1411 aa34.12■■■■□ 3.05
LDLRAD4-212ENST00000587905 IQGAP2Q13576 1575 aa34.11■■■■□ 3.05
LDLRAD4-212ENST00000587905 CTTNBP2Q8WZ74 1663 aa34.03■■■■□ 3.04
LDLRAD4-212ENST00000587905 CARMIL2Q6F5E8 1435 aa33.91■■■■□ 3.02
LDLRAD4-212ENST00000587905 TTBK1Q5TCY1 1321 aaPredicted RBP33.89■■■■□ 3.02
LDLRAD4-212ENST00000587905 UGGT2Q9NYU1 1516 aa33.87■■■■□ 3.01
LDLRAD4-212ENST00000587905 DISP1Q96F81 1524 aa33.83■■■■□ 3.01
LDLRAD4-212ENST00000587905 KIF21BO75037 1637 aa33.82■■■■□ 3
LDLRAD4-212ENST00000587905 EHMT2Q96KQ7 1210 aa33.79■■■■□ 3
LDLRAD4-212ENST00000587905 PTPRGP23470 1445 aa33.79■■■■□ 3
LDLRAD4-212ENST00000587905 TNIKQ9UKE5 1360 aa33.78■■■■□ 3
LDLRAD4-212ENST00000587905 KIAA0556O60303 1618 aa33.78■■■■□ 3
LDLRAD4-212ENST00000587905 TRHP20396 242 aaPredicted RBP33.74■■■□□ 2.99
LDLRAD4-212ENST00000587905 ADCY10Q96PN6 1610 aa33.7■■■□□ 2.99
LDLRAD4-212ENST00000587905 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
LDLRAD4-212ENST00000587905 RANGAP1P46060 587 aaPredicted RBP33.65■■■□□ 2.98
LDLRAD4-212ENST00000587905 NPM1P06748 294 aaKnown RBP eCLIP33.61■■■□□ 2.97
LDLRAD4-212ENST00000587905 UBTFP17480 764 aaKnown RBP33.6■■■□□ 2.97
LDLRAD4-212ENST00000587905 P3H3Q8IVL6 736 aa33.58■■■□□ 2.97
LDLRAD4-212ENST00000587905 UACAQ9BZF9 1416 aa33.54■■■□□ 2.96
LDLRAD4-212ENST00000587905 SAMD9Q5K651 1589 aa33.52■■■□□ 2.96
LDLRAD4-212ENST00000587905 ABCC2Q92887 1545 aa33.49■■■□□ 2.95
LDLRAD4-212ENST00000587905 UHRF1BP1LA0JNW5 1464 aa33.48■■■□□ 2.95
LDLRAD4-212ENST00000587905 PLB1Q6P1J6 1458 aa33.45■■■□□ 2.95
LDLRAD4-212ENST00000587905 MAPKBP1O60336 1514 aa33.43■■■□□ 2.94
LDLRAD4-212ENST00000587905 FHOD3Q2V2M9 1422 aa33.38■■■□□ 2.93
LDLRAD4-212ENST00000587905 ABCA8O94911 1581 aa33.38■■■□□ 2.93
LDLRAD4-212ENST00000587905 EFCAB5A4FU69 1503 aa33.37■■■□□ 2.93
LDLRAD4-212ENST00000587905 KIF13AQ9H1H9 1805 aa33.35■■■□□ 2.93
LDLRAD4-212ENST00000587905 ZCCHC11Q5TAX3 1644 aaKnown RBP33.35■■■□□ 2.93
LDLRAD4-212ENST00000587905 KDM5BQ9UGL1 1544 aa33.33■■■□□ 2.93
LDLRAD4-212ENST00000587905 ABCC10Q5T3U5 1492 aa33.29■■■□□ 2.92
LDLRAD4-212ENST00000587905 ASXL2Q76L83 1435 aa33.28■■■□□ 2.92
LDLRAD4-212ENST00000587905 FAM69CQ0P6D2 419 aa33.28■■■□□ 2.92
LDLRAD4-212ENST00000587905 DIP2BQ9P265 1576 aa33.27■■■□□ 2.92
LDLRAD4-212ENST00000587905 ARID3CA6NKF2 412 aa33.25■■■□□ 2.91
LDLRAD4-212ENST00000587905 RAPGEF6Q8TEU7 1601 aa33.24■■■□□ 2.91
LDLRAD4-212ENST00000587905 ARHGAP35Q9NRY4 1499 aa33.22■■■□□ 2.91
LDLRAD4-212ENST00000587905 ATP10BO94823 1461 aa33.11■■■□□ 2.89
LDLRAD4-212ENST00000587905 WDR7Q9Y4E6 1490 aa33.11■■■□□ 2.89
LDLRAD4-212ENST00000587905 TSPOAP1O95153 1857 aa33.1■■■□□ 2.89
LDLRAD4-212ENST00000587905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.09■■■□□ 2.89
LDLRAD4-212ENST00000587905 HNRNPUL2Q1KMD3 747 aaKnown RBP33.09■■■□□ 2.89
LDLRAD4-212ENST00000587905 NUP153P49790 1475 aaKnown RBP33.09■■■□□ 2.89
LDLRAD4-212ENST00000587905 EPRSP07814 1512 aaKnown RBP33.07■■■□□ 2.88
LDLRAD4-212ENST00000587905 FMN1Q68DA7 1419 aa33.06■■■□□ 2.88
LDLRAD4-212ENST00000587905 GLI2P10070 1586 aa33.04■■■□□ 2.88
LDLRAD4-212ENST00000587905 CLIP1P30622 1438 aa33.03■■■□□ 2.88
LDLRAD4-212ENST00000587905 ATP1B4Q9UN42 357 aaPredicted RBP33.03■■■□□ 2.88
LDLRAD4-212ENST00000587905 KCNH8Q96L42 1107 aa33.02■■■□□ 2.88
LDLRAD4-212ENST00000587905 LOC105371045A0A1W2PR82 267 aa32.99■■■□□ 2.87
LDLRAD4-212ENST00000587905 HECW1Q76N89 1606 aa32.95■■■□□ 2.87
LDLRAD4-212ENST00000587905 MAP3K4Q9Y6R4 1608 aa32.93■■■□□ 2.86
LDLRAD4-212ENST00000587905 CDK13Q14004 1512 aaKnown RBP32.92■■■□□ 2.86
LDLRAD4-212ENST00000587905 PPRC1Q5VV67 1664 aaKnown RBP32.88■■■□□ 2.85
LDLRAD4-212ENST00000587905 CEP162Q5TB80 1403 aa32.88■■■□□ 2.85
LDLRAD4-212ENST00000587905 PCF11O94913 1555 aaKnown RBP32.87■■■□□ 2.85
LDLRAD4-212ENST00000587905 CFAP43Q8NDM7 1665 aa32.85■■■□□ 2.85
LDLRAD4-212ENST00000587905 PLEKHD1A6NEE1 506 aa32.84■■■□□ 2.85
LDLRAD4-212ENST00000587905 LRRIQ1Q96JM4 1722 aa32.8■■■□□ 2.84
LDLRAD4-212ENST00000587905 CD109Q6YHK3 1445 aa32.8■■■□□ 2.84
LDLRAD4-212ENST00000587905 CASKIN1Q8WXD9 1431 aa32.79■■■□□ 2.84
LDLRAD4-212ENST00000587905 KDM6BO15054 1643 aa32.78■■■□□ 2.84
LDLRAD4-212ENST00000587905 TEX14Q8IWB6 1497 aa32.77■■■□□ 2.84
LDLRAD4-212ENST00000587905 ABCA9Q8IUA7 1624 aa32.76■■■□□ 2.83
LDLRAD4-212ENST00000587905 FYCO1Q9BQS8 1478 aa32.73■■■□□ 2.83
LDLRAD4-212ENST00000587905 MAGI3Q5TCQ9 1506 aa32.7■■■□□ 2.83
LDLRAD4-212ENST00000587905 CDK11AQ9UQ88 783 aaPredicted RBP32.69■■■□□ 2.82
LDLRAD4-212ENST00000587905 CCDC18Q5T9S5 1454 aa32.67■■■□□ 2.82
LDLRAD4-212ENST00000587905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.63■■■□□ 2.81
LDLRAD4-212ENST00000587905 TTC37Q6PGP7 1564 aa32.62■■■□□ 2.81
LDLRAD4-212ENST00000587905 TROQ12816 1431 aaPredicted RBP32.59■■■□□ 2.81
LDLRAD4-212ENST00000587905 KIF14Q15058 1648 aa32.57■■■□□ 2.8
LDLRAD4-212ENST00000587905 COL17A1Q9UMD9 1497 aaPredicted RBP32.56■■■□□ 2.8
LDLRAD4-212ENST00000587905 VPS8Q8N3P4 1428 aa32.47■■■□□ 2.79
LDLRAD4-212ENST00000587905 MYO5CQ9NQX4 1742 aa32.46■■■□□ 2.79
LDLRAD4-212ENST00000587905 NEO1Q92859 1461 aa32.46■■■□□ 2.79
LDLRAD4-212ENST00000587905 FANCAO15360 1455 aa32.44■■■□□ 2.78
LDLRAD4-212ENST00000587905 CFAP74Q9C0B2 1584 aa32.42■■■□□ 2.78
LDLRAD4-212ENST00000587905 ARAP3Q8WWN8 1544 aa32.41■■■□□ 2.78
LDLRAD4-212ENST00000587905 PHLDB1Q86UU1 1377 aa32.41■■■□□ 2.78
LDLRAD4-212ENST00000587905 PLCH2O75038 1416 aa32.4■■■□□ 2.78
LDLRAD4-212ENST00000587905 MTUS2Q5JR59 1369 aa32.38■■■□□ 2.77
LDLRAD4-212ENST00000587905 AKNAQ7Z591 1439 aa32.36■■■□□ 2.77
LDLRAD4-212ENST00000587905 ARHGAP5Q13017 1502 aa32.34■■■□□ 2.77
LDLRAD4-212ENST00000587905 RAPGEF3O95398 923 aa32.32■■■□□ 2.76
LDLRAD4-212ENST00000587905 EHBP1L1Q8N3D4 1523 aa32.31■■■□□ 2.76
LDLRAD4-212ENST00000587905 TIAM1Q13009 1591 aa32.3■■■□□ 2.76
LDLRAD4-212ENST00000587905 EFCAB2Q5VUJ9 269 aa32.3■■■□□ 2.76
LDLRAD4-212ENST00000587905 CDC42BPBQ9Y5S2 1711 aa32.29■■■□□ 2.76
LDLRAD4-212ENST00000587905 PREX2Q70Z35 1606 aa32.29■■■□□ 2.76
LDLRAD4-212ENST00000587905 CDC42BPAQ5VT25 1732 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms