RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 JPH4Q96JJ6 628 aa30.11■■■□□ 2.41
GCDH-206ENST00000587832 IGF1RP08069 1367 aa30.1■■■□□ 2.41
GCDH-206ENST00000587832 KIAA0586Q9BVV6 1533 aa30.06■■■□□ 2.4
GCDH-206ENST00000587832 KIF13AQ9H1H9 1805 aa30.03■■■□□ 2.4
GCDH-206ENST00000587832 ADCY10Q96PN6 1610 aa29.93■■■□□ 2.38
GCDH-206ENST00000587832 MAPKBP1O60336 1514 aa29.91■■■□□ 2.38
GCDH-206ENST00000587832 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
GCDH-206ENST00000587832 IQGAP2Q13576 1575 aa29.82■■■□□ 2.36
GCDH-206ENST00000587832 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
GCDH-206ENST00000587832 DIP2BQ9P265 1576 aa29.79■■■□□ 2.36
GCDH-206ENST00000587832 NPM1P06748 294 aaKnown RBP eCLIP29.75■■■□□ 2.35
GCDH-206ENST00000587832 CARMIL2Q6F5E8 1435 aa29.73■■■□□ 2.35
GCDH-206ENST00000587832 PTPRGP23470 1445 aa29.7■■■□□ 2.34
GCDH-206ENST00000587832 RAPGEF2Q9Y4G8 1499 aa29.69■■■□□ 2.34
GCDH-206ENST00000587832 TNIKQ9UKE5 1360 aa29.67■■■□□ 2.34
GCDH-206ENST00000587832 FAM69CQ0P6D2 419 aa29.64■■■□□ 2.34
GCDH-206ENST00000587832 DISP1Q96F81 1524 aa29.64■■■□□ 2.34
GCDH-206ENST00000587832 UGGT2Q9NYU1 1516 aa29.63■■■□□ 2.33
GCDH-206ENST00000587832 ABCC2Q92887 1545 aa29.62■■■□□ 2.33
GCDH-206ENST00000587832 UHRF1BP1LA0JNW5 1464 aa29.6■■■□□ 2.33
GCDH-206ENST00000587832 CTTNBP2Q8WZ74 1663 aa29.6■■■□□ 2.33
GCDH-206ENST00000587832 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
GCDH-206ENST00000587832 TSPOAP1O95153 1857 aa29.53■■■□□ 2.32
GCDH-206ENST00000587832 AEBP2Q6ZN18 517 aaPredicted RBP29.51■■■□□ 2.31
GCDH-206ENST00000587832 UACAQ9BZF9 1416 aa29.51■■■□□ 2.31
GCDH-206ENST00000587832 KDM6BO15054 1643 aa29.49■■■□□ 2.31
GCDH-206ENST00000587832 PLB1Q6P1J6 1458 aa29.48■■■□□ 2.31
GCDH-206ENST00000587832 GLI2P10070 1586 aa29.48■■■□□ 2.31
GCDH-206ENST00000587832 ASXL2Q76L83 1435 aa29.46■■■□□ 2.31
GCDH-206ENST00000587832 KDM5BQ9UGL1 1544 aa29.45■■■□□ 2.31
GCDH-206ENST00000587832 TTBK1Q5TCY1 1321 aaPredicted RBP29.44■■■□□ 2.3
GCDH-206ENST00000587832 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
GCDH-206ENST00000587832 ZCCHC11Q5TAX3 1644 aaKnown RBP29.42■■■□□ 2.3
GCDH-206ENST00000587832 PPRC1Q5VV67 1664 aaKnown RBP29.41■■■□□ 2.3
GCDH-206ENST00000587832 GOLGA3Q08378 1498 aa29.37■■■□□ 2.29
GCDH-206ENST00000587832 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
GCDH-206ENST00000587832 EPRSP07814 1512 aaKnown RBP29.3■■■□□ 2.28
GCDH-206ENST00000587832 ABCA8O94911 1581 aa29.27■■■□□ 2.28
GCDH-206ENST00000587832 WDR7Q9Y4E6 1490 aa29.22■■■□□ 2.27
GCDH-206ENST00000587832 TEX14Q8IWB6 1497 aa29.19■■■□□ 2.26
GCDH-206ENST00000587832 CFAP43Q8NDM7 1665 aa29.15■■■□□ 2.26
GCDH-206ENST00000587832 SAMD9Q5K651 1589 aa29.13■■■□□ 2.25
GCDH-206ENST00000587832 EEA1Q15075 1411 aa29.11■■■□□ 2.25
GCDH-206ENST00000587832 CSRNP3Q8WYN3 585 aa29.08■■■□□ 2.25
GCDH-206ENST00000587832 COL17A1Q9UMD9 1497 aaPredicted RBP29.08■■■□□ 2.25
GCDH-206ENST00000587832 MAGI3Q5TCQ9 1506 aa29.04■■■□□ 2.24
GCDH-206ENST00000587832 KDM4FA0A1W2PPD8 638 aa29.03■■■□□ 2.24
GCDH-206ENST00000587832 CD109Q6YHK3 1445 aa28.98■■■□□ 2.23
GCDH-206ENST00000587832 RAPGEF6Q8TEU7 1601 aa28.98■■■□□ 2.23
GCDH-206ENST00000587832 FAM9AQ8IZU1 332 aaPredicted RBP28.97■■■□□ 2.23
GCDH-206ENST00000587832 ATP10BO94823 1461 aa28.95■■■□□ 2.22
GCDH-206ENST00000587832 KIF21BO75037 1637 aa28.94■■■□□ 2.22
GCDH-206ENST00000587832 ABCA9Q8IUA7 1624 aa28.91■■■□□ 2.22
GCDH-206ENST00000587832 ADGRL1O94910 1474 aa28.91■■■□□ 2.22
GCDH-206ENST00000587832 P3H3Q8IVL6 736 aa28.89■■■□□ 2.22
GCDH-206ENST00000587832 KCNH8Q96L42 1107 aa28.88■■■□□ 2.21
GCDH-206ENST00000587832 EFCAB5A4FU69 1503 aa28.84■■■□□ 2.21
GCDH-206ENST00000587832 NUP153P49790 1475 aaKnown RBP28.83■■■□□ 2.21
GCDH-206ENST00000587832 ARAP3Q8WWN8 1544 aa28.83■■■□□ 2.21
GCDH-206ENST00000587832 FHOD3Q2V2M9 1422 aa28.77■■■□□ 2.2
GCDH-206ENST00000587832 ARID3CA6NKF2 412 aa28.77■■■□□ 2.2
GCDH-206ENST00000587832 PHLDB1Q86UU1 1377 aa28.75■■■□□ 2.19
GCDH-206ENST00000587832 NEO1Q92859 1461 aa28.71■■■□□ 2.19
GCDH-206ENST00000587832 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
GCDH-206ENST00000587832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.62■■■□□ 2.17
GCDH-206ENST00000587832 HNRNPUL2Q1KMD3 747 aaKnown RBP28.62■■■□□ 2.17
GCDH-206ENST00000587832 FRMPD1Q5SYB0 1578 aa28.62■■■□□ 2.17
GCDH-206ENST00000587832 CFAP74Q9C0B2 1584 aa28.6■■■□□ 2.17
GCDH-206ENST00000587832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.56■■■□□ 2.16
GCDH-206ENST00000587832 PLEKHD1A6NEE1 506 aa28.55■■■□□ 2.16
GCDH-206ENST00000587832 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
GCDH-206ENST00000587832 RICTORQ6R327 1708 aa28.55■■■□□ 2.16
GCDH-206ENST00000587832 TTC37Q6PGP7 1564 aa28.54■■■□□ 2.16
GCDH-206ENST00000587832 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
GCDH-206ENST00000587832 HECW1Q76N89 1606 aa28.53■■■□□ 2.16
GCDH-206ENST00000587832 CDK13Q14004 1512 aaKnown RBP28.52■■■□□ 2.16
GCDH-206ENST00000587832 FMN1Q68DA7 1419 aa28.52■■■□□ 2.16
GCDH-206ENST00000587832 ARHGAP35Q9NRY4 1499 aa28.5■■■□□ 2.15
GCDH-206ENST00000587832 ADAMTSL3P82987 1691 aa28.5■■■□□ 2.15
GCDH-206ENST00000587832 FANCAO15360 1455 aa28.48■■■□□ 2.15
GCDH-206ENST00000587832 RAPGEF3O95398 923 aa28.48■■■□□ 2.15
GCDH-206ENST00000587832 ARHGEF40Q8TER5 1519 aa28.48■■■□□ 2.15
GCDH-206ENST00000587832 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
GCDH-206ENST00000587832 AKNAQ7Z591 1439 aa28.44■■■□□ 2.14
GCDH-206ENST00000587832 BCORL1Q5H9F3 1711 aa28.44■■■□□ 2.14
GCDH-206ENST00000587832 DENND4BO75064 1496 aaPredicted RBP28.44■■■□□ 2.14
GCDH-206ENST00000587832 ZMYM4Q5VZL5 1548 aa28.43■■■□□ 2.14
GCDH-206ENST00000587832 MYO5CQ9NQX4 1742 aa28.4■■■□□ 2.14
GCDH-206ENST00000587832 LRRIQ1Q96JM4 1722 aa28.38■■■□□ 2.13
GCDH-206ENST00000587832 PLCH2O75038 1416 aa28.35■■■□□ 2.13
GCDH-206ENST00000587832 PTPRMP28827 1452 aa28.34■■■□□ 2.13
GCDH-206ENST00000587832 KIF14Q15058 1648 aa28.34■■■□□ 2.13
GCDH-206ENST00000587832 MADDQ8WXG6 1647 aa28.33■■■□□ 2.13
GCDH-206ENST00000587832 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
GCDH-206ENST00000587832 MAGI2Q86UL8 1455 aa28.32■■■□□ 2.12
GCDH-206ENST00000587832 ZFYVE16Q7Z3T8 1539 aa28.31■■■□□ 2.12
GCDH-206ENST00000587832 POGZQ7Z3K3 1410 aa28.28■■■□□ 2.12
GCDH-206ENST00000587832 CDK11AQ9UQ88 783 aaPredicted RBP28.28■■■□□ 2.12
GCDH-206ENST00000587832 TROQ12816 1431 aaPredicted RBP28.27■■■□□ 2.12
GCDH-206ENST00000587832 SIGLEC1Q9BZZ2 1709 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms