RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
CLPTM1-207ENST00000587537 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
CLPTM1-207ENST00000587537 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
CLPTM1-207ENST00000587537 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
CLPTM1-207ENST00000587537 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
CLPTM1-207ENST00000587537 EFCAB5A4FU69 1503 aa16.62■□□□□ 0.25
CLPTM1-207ENST00000587537 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
CLPTM1-207ENST00000587537 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
CLPTM1-207ENST00000587537 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
CLPTM1-207ENST00000587537 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
CLPTM1-207ENST00000587537 CLIP1P30622 1438 aa16.56■□□□□ 0.24
CLPTM1-207ENST00000587537 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
CLPTM1-207ENST00000587537 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
CLPTM1-207ENST00000587537 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
CLPTM1-207ENST00000587537 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
CLPTM1-207ENST00000587537 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
CLPTM1-207ENST00000587537 KIAA0556O60303 1618 aa16.49■□□□□ 0.23
CLPTM1-207ENST00000587537 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
CLPTM1-207ENST00000587537 PRG4Q92954 1404 aaPredicted RBP16.47■□□□□ 0.23
CLPTM1-207ENST00000587537 DISP1Q96F81 1524 aa16.47■□□□□ 0.23
CLPTM1-207ENST00000587537 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
CLPTM1-207ENST00000587537 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
CLPTM1-207ENST00000587537 VPS8Q8N3P4 1428 aa16.38■□□□□ 0.21
CLPTM1-207ENST00000587537 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
CLPTM1-207ENST00000587537 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
CLPTM1-207ENST00000587537 PTPRGP23470 1445 aa16.36■□□□□ 0.21
CLPTM1-207ENST00000587537 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
CLPTM1-207ENST00000587537 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
CLPTM1-207ENST00000587537 CASKIN1Q8WXD9 1431 aa16.33■□□□□ 0.2
CLPTM1-207ENST00000587537 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
CLPTM1-207ENST00000587537 HECW1Q76N89 1606 aa16.3■□□□□ 0.2
CLPTM1-207ENST00000587537 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
CLPTM1-207ENST00000587537 RAPGEF6Q8TEU7 1601 aa16.3■□□□□ 0.2
CLPTM1-207ENST00000587537 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
CLPTM1-207ENST00000587537 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
CLPTM1-207ENST00000587537 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
CLPTM1-207ENST00000587537 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
CLPTM1-207ENST00000587537 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
CLPTM1-207ENST00000587537 ABCA8O94911 1581 aa16.28■□□□□ 0.2
CLPTM1-207ENST00000587537 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
CLPTM1-207ENST00000587537 CCDC18Q5T9S5 1454 aa16.27■□□□□ 0.19
CLPTM1-207ENST00000587537 UACAQ9BZF9 1416 aa16.27■□□□□ 0.19
CLPTM1-207ENST00000587537 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
CLPTM1-207ENST00000587537 ABCC2Q92887 1545 aa16.25■□□□□ 0.19
CLPTM1-207ENST00000587537 APLP2Q06481 763 aa16.24■□□□□ 0.19
CLPTM1-207ENST00000587537 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
CLPTM1-207ENST00000587537 NUP153P49790 1475 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-207ENST00000587537 CFAP43Q8NDM7 1665 aa16.19■□□□□ 0.18
CLPTM1-207ENST00000587537 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
CLPTM1-207ENST00000587537 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
CLPTM1-207ENST00000587537 DNAJC5Q9H3Z4 198 aa16.17■□□□□ 0.18
CLPTM1-207ENST00000587537 KDM5BQ9UGL1 1544 aa16.17■□□□□ 0.18
CLPTM1-207ENST00000587537 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
CLPTM1-207ENST00000587537 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
CLPTM1-207ENST00000587537 ADCY10Q96PN6 1610 aa16.16■□□□□ 0.18
CLPTM1-207ENST00000587537 ATP1B4Q9UN42 357 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-207ENST00000587537 LRRIQ1Q96JM4 1722 aa16.12■□□□□ 0.17
CLPTM1-207ENST00000587537 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLPTM1-207ENST00000587537 ATP10BO94823 1461 aa16.11■□□□□ 0.17
CLPTM1-207ENST00000587537 ZCCHC11Q5TAX3 1644 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-207ENST00000587537 EHBP1L1Q8N3D4 1523 aa16.1■□□□□ 0.17
CLPTM1-207ENST00000587537 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
CLPTM1-207ENST00000587537 LRRC9Q6ZRR7 1453 aa16.08■□□□□ 0.16
CLPTM1-207ENST00000587537 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-207ENST00000587537 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
CLPTM1-207ENST00000587537 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
CLPTM1-207ENST00000587537 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
CLPTM1-207ENST00000587537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
CLPTM1-207ENST00000587537 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
CLPTM1-207ENST00000587537 TROQ12816 1431 aaPredicted RBP16.05■□□□□ 0.16
CLPTM1-207ENST00000587537 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-207ENST00000587537 WDR7Q9Y4E6 1490 aa16.02■□□□□ 0.15
CLPTM1-207ENST00000587537 KIF14Q15058 1648 aa16.01■□□□□ 0.15
CLPTM1-207ENST00000587537 ASXL2Q76L83 1435 aa15.99■□□□□ 0.15
CLPTM1-207ENST00000587537 MAGI3Q5TCQ9 1506 aa15.98■□□□□ 0.15
CLPTM1-207ENST00000587537 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
CLPTM1-207ENST00000587537 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
CLPTM1-207ENST00000587537 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
CLPTM1-207ENST00000587537 ITSN2Q9NZM3 1697 aa15.94■□□□□ 0.14
CLPTM1-207ENST00000587537 GLI2P10070 1586 aa15.92■□□□□ 0.14
CLPTM1-207ENST00000587537 ABCA9Q8IUA7 1624 aa15.91■□□□□ 0.14
CLPTM1-207ENST00000587537 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
CLPTM1-207ENST00000587537 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
CLPTM1-207ENST00000587537 CCNB3Q8WWL7 1395 aa15.89■□□□□ 0.13
CLPTM1-207ENST00000587537 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.13
CLPTM1-207ENST00000587537 MIA2Q96PC5 1412 aa15.89■□□□□ 0.13
CLPTM1-207ENST00000587537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLPTM1-207ENST00000587537 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
CLPTM1-207ENST00000587537 DIP2BQ9P265 1576 aa15.86■□□□□ 0.13
CLPTM1-207ENST00000587537 PREX2Q70Z35 1606 aa15.86■□□□□ 0.13
CLPTM1-207ENST00000587537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLPTM1-207ENST00000587537 TTC37Q6PGP7 1564 aa15.85■□□□□ 0.13
CLPTM1-207ENST00000587537 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
CLPTM1-207ENST00000587537 GPATCH8Q9UKJ3 1502 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-207ENST00000587537 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
CLPTM1-207ENST00000587537 RRBP1Q9P2E9 1410 aaKnown RBP15.84■□□□□ 0.13
CLPTM1-207ENST00000587537 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.13
CLPTM1-207ENST00000587537 PHLDB1Q86UU1 1377 aa15.83■□□□□ 0.12
CLPTM1-207ENST00000587537 PLCH2O75038 1416 aa15.83■□□□□ 0.12
CLPTM1-207ENST00000587537 FGD6Q6ZV73 1430 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms