RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 JPH4Q96JJ6 628 aa17.62■□□□□ 0.41
SMARCA4-209ENST00000586122 ERCC6L2Q5T890 1561 aa17.61■□□□□ 0.41
SMARCA4-209ENST00000586122 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
SMARCA4-209ENST00000586122 RAPGEF2Q9Y4G8 1499 aa17.6■□□□□ 0.41
SMARCA4-209ENST00000586122 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
SMARCA4-209ENST00000586122 EEA1Q15075 1411 aa17.54■□□□□ 0.4
SMARCA4-209ENST00000586122 PRXQ9BXM0 1461 aa17.51■□□□□ 0.39
SMARCA4-209ENST00000586122 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
SMARCA4-209ENST00000586122 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
SMARCA4-209ENST00000586122 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
SMARCA4-209ENST00000586122 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
SMARCA4-209ENST00000586122 TNIKQ9UKE5 1360 aa17.41■□□□□ 0.38
SMARCA4-209ENST00000586122 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-209ENST00000586122 PTPRGP23470 1445 aa17.39■□□□□ 0.38
SMARCA4-209ENST00000586122 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
SMARCA4-209ENST00000586122 DISP1Q96F81 1524 aa17.38■□□□□ 0.37
SMARCA4-209ENST00000586122 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
SMARCA4-209ENST00000586122 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
SMARCA4-209ENST00000586122 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
SMARCA4-209ENST00000586122 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMARCA4-209ENST00000586122 KIF21BO75037 1637 aa17.33■□□□□ 0.37
SMARCA4-209ENST00000586122 MAPKBP1O60336 1514 aa17.33■□□□□ 0.37
SMARCA4-209ENST00000586122 UHRF1BP1LA0JNW5 1464 aa17.31■□□□□ 0.36
SMARCA4-209ENST00000586122 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
SMARCA4-209ENST00000586122 ABCC2Q92887 1545 aa17.27■□□□□ 0.36
SMARCA4-209ENST00000586122 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-209ENST00000586122 KIF13AQ9H1H9 1805 aa17.25■□□□□ 0.35
SMARCA4-209ENST00000586122 ABCC10Q5T3U5 1492 aa17.23■□□□□ 0.35
SMARCA4-209ENST00000586122 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
SMARCA4-209ENST00000586122 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-209ENST00000586122 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.34
SMARCA4-209ENST00000586122 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
SMARCA4-209ENST00000586122 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
SMARCA4-209ENST00000586122 ABCA8O94911 1581 aa17.18■□□□□ 0.34
SMARCA4-209ENST00000586122 EFCAB5A4FU69 1503 aa17.17■□□□□ 0.34
SMARCA4-209ENST00000586122 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-209ENST00000586122 ASXL2Q76L83 1435 aa17.14■□□□□ 0.33
SMARCA4-209ENST00000586122 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.33
SMARCA4-209ENST00000586122 GLI2P10070 1586 aa17.12■□□□□ 0.33
SMARCA4-209ENST00000586122 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-209ENST00000586122 RAPGEF6Q8TEU7 1601 aa17.08■□□□□ 0.32
SMARCA4-209ENST00000586122 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
SMARCA4-209ENST00000586122 WDR7Q9Y4E6 1490 aa17.07■□□□□ 0.32
SMARCA4-209ENST00000586122 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-209ENST00000586122 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
SMARCA4-209ENST00000586122 TSPOAP1O95153 1857 aa17.03■□□□□ 0.32
SMARCA4-209ENST00000586122 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-209ENST00000586122 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.31
SMARCA4-209ENST00000586122 ATP10BO94823 1461 aa17■□□□□ 0.31
SMARCA4-209ENST00000586122 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
SMARCA4-209ENST00000586122 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-209ENST00000586122 CFAP43Q8NDM7 1665 aa16.98■□□□□ 0.31
SMARCA4-209ENST00000586122 TEX14Q8IWB6 1497 aa16.98■□□□□ 0.31
SMARCA4-209ENST00000586122 ARHGAP35Q9NRY4 1499 aa16.98■□□□□ 0.31
SMARCA4-209ENST00000586122 PPRC1Q5VV67 1664 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-209ENST00000586122 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
SMARCA4-209ENST00000586122 KDM6BO15054 1643 aa16.96■□□□□ 0.3
SMARCA4-209ENST00000586122 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
SMARCA4-209ENST00000586122 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
SMARCA4-209ENST00000586122 CD109Q6YHK3 1445 aa16.9■□□□□ 0.3
SMARCA4-209ENST00000586122 ABCA9Q8IUA7 1624 aa16.9■□□□□ 0.3
SMARCA4-209ENST00000586122 ARID3CA6NKF2 412 aa16.9■□□□□ 0.3
SMARCA4-209ENST00000586122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-209ENST00000586122 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-209ENST00000586122 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
SMARCA4-209ENST00000586122 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
SMARCA4-209ENST00000586122 CLIP1P30622 1438 aa16.86■□□□□ 0.29
SMARCA4-209ENST00000586122 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
SMARCA4-209ENST00000586122 CDK13Q14004 1512 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-209ENST00000586122 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
SMARCA4-209ENST00000586122 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-209ENST00000586122 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
SMARCA4-209ENST00000586122 PCF11O94913 1555 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-209ENST00000586122 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
SMARCA4-209ENST00000586122 NEO1Q92859 1461 aa16.79■□□□□ 0.28
SMARCA4-209ENST00000586122 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-209ENST00000586122 ARAP3Q8WWN8 1544 aa16.77■□□□□ 0.28
SMARCA4-209ENST00000586122 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-209ENST00000586122 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.27
SMARCA4-209ENST00000586122 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
SMARCA4-209ENST00000586122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.27
SMARCA4-209ENST00000586122 TROQ12816 1431 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-209ENST00000586122 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
SMARCA4-209ENST00000586122 KIF14Q15058 1648 aa16.74■□□□□ 0.27
SMARCA4-209ENST00000586122 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
SMARCA4-209ENST00000586122 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
SMARCA4-209ENST00000586122 FANCAO15360 1455 aa16.69■□□□□ 0.26
SMARCA4-209ENST00000586122 PLCH2O75038 1416 aa16.68■□□□□ 0.26
SMARCA4-209ENST00000586122 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
SMARCA4-209ENST00000586122 DENND4BO75064 1496 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-209ENST00000586122 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-209ENST00000586122 RICTORQ6R327 1708 aa16.62■□□□□ 0.25
SMARCA4-209ENST00000586122 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
SMARCA4-209ENST00000586122 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
SMARCA4-209ENST00000586122 FRMPD1Q5SYB0 1578 aa16.61■□□□□ 0.25
SMARCA4-209ENST00000586122 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
SMARCA4-209ENST00000586122 PREX2Q70Z35 1606 aa16.6■□□□□ 0.25
SMARCA4-209ENST00000586122 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
SMARCA4-209ENST00000586122 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
SMARCA4-209ENST00000586122 RAPGEF3O95398 923 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms