RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 PRG4Q92954 1404 aaPredicted RBP31.32■■■□□ 2.6
HMG20B-216ENST00000585900 JPH4Q96JJ6 628 aa31.3■■■□□ 2.6
HMG20B-216ENST00000585900 KIAA0586Q9BVV6 1533 aa31.22■■■□□ 2.59
HMG20B-216ENST00000585900 CARMIL1Q5VZK9 1371 aa31.21■■■□□ 2.59
HMG20B-216ENST00000585900 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
HMG20B-216ENST00000585900 IQGAP2Q13576 1575 aa30.97■■■□□ 2.55
HMG20B-216ENST00000585900 NPM1P06748 294 aaKnown RBP eCLIP30.95■■■□□ 2.55
HMG20B-216ENST00000585900 CARMIL2Q6F5E8 1435 aa30.95■■■□□ 2.54
HMG20B-216ENST00000585900 ADCY10Q96PN6 1610 aa30.89■■■□□ 2.54
HMG20B-216ENST00000585900 PTPRGP23470 1445 aa30.88■■■□□ 2.53
HMG20B-216ENST00000585900 TNIKQ9UKE5 1360 aa30.86■■■□□ 2.53
HMG20B-216ENST00000585900 MAPKBP1O60336 1514 aa30.83■■■□□ 2.53
HMG20B-216ENST00000585900 TTBK1Q5TCY1 1321 aaPredicted RBP30.81■■■□□ 2.52
HMG20B-216ENST00000585900 UGGT2Q9NYU1 1516 aa30.77■■■□□ 2.52
HMG20B-216ENST00000585900 KIF13AQ9H1H9 1805 aa30.76■■■□□ 2.51
HMG20B-216ENST00000585900 ABCC10Q5T3U5 1492 aa30.76■■■□□ 2.51
HMG20B-216ENST00000585900 DISP1Q96F81 1524 aa30.75■■■□□ 2.51
HMG20B-216ENST00000585900 FAM69CQ0P6D2 419 aa30.72■■■□□ 2.51
HMG20B-216ENST00000585900 PRXQ9BXM0 1461 aa30.7■■■□□ 2.51
HMG20B-216ENST00000585900 CTTNBP2Q8WZ74 1663 aa30.7■■■□□ 2.5
HMG20B-216ENST00000585900 DIP2BQ9P265 1576 aa30.68■■■□□ 2.5
HMG20B-216ENST00000585900 KIAA0556O60303 1618 aa30.68■■■□□ 2.5
HMG20B-216ENST00000585900 ABCC2Q92887 1545 aa30.68■■■□□ 2.5
HMG20B-216ENST00000585900 UACAQ9BZF9 1416 aa30.65■■■□□ 2.5
HMG20B-216ENST00000585900 UHRF1BP1LA0JNW5 1464 aa30.64■■■□□ 2.5
HMG20B-216ENST00000585900 GOLGA3Q08378 1498 aa30.61■■■□□ 2.49
HMG20B-216ENST00000585900 EEA1Q15075 1411 aa30.56■■■□□ 2.48
HMG20B-216ENST00000585900 CSRNP3Q8WYN3 585 aa30.55■■■□□ 2.48
HMG20B-216ENST00000585900 PLB1Q6P1J6 1458 aa30.54■■■□□ 2.48
HMG20B-216ENST00000585900 ASXL2Q76L83 1435 aa30.53■■■□□ 2.48
HMG20B-216ENST00000585900 KDM5BQ9UGL1 1544 aa30.49■■■□□ 2.47
HMG20B-216ENST00000585900 ZCCHC11Q5TAX3 1644 aaKnown RBP30.43■■■□□ 2.46
HMG20B-216ENST00000585900 FAM9AQ8IZU1 332 aaPredicted RBP30.41■■■□□ 2.46
HMG20B-216ENST00000585900 GLI2P10070 1586 aa30.4■■■□□ 2.46
HMG20B-216ENST00000585900 TSPOAP1O95153 1857 aa30.4■■■□□ 2.46
HMG20B-216ENST00000585900 KDM6BO15054 1643 aa30.37■■■□□ 2.45
HMG20B-216ENST00000585900 ABCA8O94911 1581 aa30.36■■■□□ 2.45
HMG20B-216ENST00000585900 EPRSP07814 1512 aaKnown RBP30.34■■■□□ 2.45
HMG20B-216ENST00000585900 AEBP2Q6ZN18 517 aaPredicted RBP30.34■■■□□ 2.45
HMG20B-216ENST00000585900 WDR7Q9Y4E6 1490 aa30.31■■■□□ 2.44
HMG20B-216ENST00000585900 P3H3Q8IVL6 736 aa30.28■■■□□ 2.44
HMG20B-216ENST00000585900 SAMD9Q5K651 1589 aa30.27■■■□□ 2.44
HMG20B-216ENST00000585900 KIF21BO75037 1637 aa30.24■■■□□ 2.43
HMG20B-216ENST00000585900 MAP3K4Q9Y6R4 1608 aa30.23■■■□□ 2.43
HMG20B-216ENST00000585900 PPRC1Q5VV67 1664 aaKnown RBP30.22■■■□□ 2.43
HMG20B-216ENST00000585900 TEX14Q8IWB6 1497 aa30.21■■■□□ 2.43
HMG20B-216ENST00000585900 CHIC1Q5VXU3 224 aa30.21■■■□□ 2.43
HMG20B-216ENST00000585900 RANGAP1P46060 587 aaPredicted RBP30.17■■■□□ 2.42
HMG20B-216ENST00000585900 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
HMG20B-216ENST00000585900 KCNH8Q96L42 1107 aa30.12■■■□□ 2.41
HMG20B-216ENST00000585900 RAPGEF6Q8TEU7 1601 aa30.11■■■□□ 2.41
HMG20B-216ENST00000585900 EFCAB5A4FU69 1503 aa30.09■■■□□ 2.41
HMG20B-216ENST00000585900 ATP10BO94823 1461 aa30.09■■■□□ 2.41
HMG20B-216ENST00000585900 FHOD3Q2V2M9 1422 aa30.09■■■□□ 2.41
HMG20B-216ENST00000585900 CFAP43Q8NDM7 1665 aa30.08■■■□□ 2.41
HMG20B-216ENST00000585900 CD109Q6YHK3 1445 aa30.07■■■□□ 2.4
HMG20B-216ENST00000585900 MAGI3Q5TCQ9 1506 aa30.03■■■□□ 2.4
HMG20B-216ENST00000585900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.02■■■□□ 2.4
HMG20B-216ENST00000585900 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
HMG20B-216ENST00000585900 HNRNPUL2Q1KMD3 747 aaKnown RBP30.02■■■□□ 2.4
HMG20B-216ENST00000585900 EHMT2Q96KQ7 1210 aa30■■■□□ 2.39
HMG20B-216ENST00000585900 COL17A1Q9UMD9 1497 aaPredicted RBP29.99■■■□□ 2.39
HMG20B-216ENST00000585900 NUP153P49790 1475 aaKnown RBP29.98■■■□□ 2.39
HMG20B-216ENST00000585900 ABCA9Q8IUA7 1624 aa29.9■■■□□ 2.38
HMG20B-216ENST00000585900 KDM4FA0A1W2PPD8 638 aa29.83■■■□□ 2.37
HMG20B-216ENST00000585900 PLEKHD1A6NEE1 506 aa29.83■■■□□ 2.37
HMG20B-216ENST00000585900 FMN1Q68DA7 1419 aa29.82■■■□□ 2.36
HMG20B-216ENST00000585900 PHLDB1Q86UU1 1377 aa29.8■■■□□ 2.36
HMG20B-216ENST00000585900 ARHGAP35Q9NRY4 1499 aa29.8■■■□□ 2.36
HMG20B-216ENST00000585900 ARAP3Q8WWN8 1544 aa29.78■■■□□ 2.36
HMG20B-216ENST00000585900 ADGRL1O94910 1474 aa29.76■■■□□ 2.35
HMG20B-216ENST00000585900 HECW1Q76N89 1606 aa29.74■■■□□ 2.35
HMG20B-216ENST00000585900 NEO1Q92859 1461 aa29.74■■■□□ 2.35
HMG20B-216ENST00000585900 CDK13Q14004 1512 aaKnown RBP29.72■■■□□ 2.35
HMG20B-216ENST00000585900 ATP1B4Q9UN42 357 aaPredicted RBP29.72■■■□□ 2.35
HMG20B-216ENST00000585900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.65■■■□□ 2.34
HMG20B-216ENST00000585900 CDK11AQ9UQ88 783 aaPredicted RBP29.63■■■□□ 2.33
HMG20B-216ENST00000585900 CFAP74Q9C0B2 1584 aa29.62■■■□□ 2.33
HMG20B-216ENST00000585900 TTC37Q6PGP7 1564 aa29.61■■■□□ 2.33
HMG20B-216ENST00000585900 FANCAO15360 1455 aa29.6■■■□□ 2.33
HMG20B-216ENST00000585900 RAPGEF3O95398 923 aa29.59■■■□□ 2.33
HMG20B-216ENST00000585900 AKNAQ7Z591 1439 aa29.55■■■□□ 2.32
HMG20B-216ENST00000585900 DENND4BO75064 1496 aaPredicted RBP29.55■■■□□ 2.32
HMG20B-216ENST00000585900 CLIP1P30622 1438 aa29.53■■■□□ 2.32
HMG20B-216ENST00000585900 FRMPD1Q5SYB0 1578 aa29.52■■■□□ 2.32
HMG20B-216ENST00000585900 KIF14Q15058 1648 aa29.5■■■□□ 2.31
HMG20B-216ENST00000585900 PCF11O94913 1555 aaKnown RBP29.49■■■□□ 2.31
HMG20B-216ENST00000585900 TROQ12816 1431 aaPredicted RBP29.49■■■□□ 2.31
HMG20B-216ENST00000585900 CASKIN1Q8WXD9 1431 aa29.49■■■□□ 2.31
HMG20B-216ENST00000585900 PLCH2O75038 1416 aa29.48■■■□□ 2.31
HMG20B-216ENST00000585900 CCDC18Q5T9S5 1454 aa29.48■■■□□ 2.31
HMG20B-216ENST00000585900 RICTORQ6R327 1708 aa29.44■■■□□ 2.3
HMG20B-216ENST00000585900 MYO5CQ9NQX4 1742 aa29.43■■■□□ 2.3
HMG20B-216ENST00000585900 FYCO1Q9BQS8 1478 aa29.42■■■□□ 2.3
HMG20B-216ENST00000585900 ARHGEF40Q8TER5 1519 aa29.42■■■□□ 2.3
HMG20B-216ENST00000585900 LRRIQ1Q96JM4 1722 aa29.42■■■□□ 2.3
HMG20B-216ENST00000585900 EFCAB2Q5VUJ9 269 aa29.4■■■□□ 2.3
HMG20B-216ENST00000585900 ZMYM4Q5VZL5 1548 aa29.39■■■□□ 2.3
HMG20B-216ENST00000585900 ARID4BQ4LE39 1312 aaPredicted RBP29.38■■■□□ 2.29
HMG20B-216ENST00000585900 SCAPERQ9BY12 1400 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms