RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 FKBP8Q14318 412 aa18.02■□□□□ 0.47
AP3D1-203ENST00000585652 KDM2AQ9Y2K7 1162 aa18.01■□□□□ 0.47
AP3D1-203ENST00000585652 RAPGEF2Q9Y4G8 1499 aa17.99■□□□□ 0.47
AP3D1-203ENST00000585652 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
AP3D1-203ENST00000585652 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
AP3D1-203ENST00000585652 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
AP3D1-203ENST00000585652 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
AP3D1-203ENST00000585652 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
AP3D1-203ENST00000585652 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
AP3D1-203ENST00000585652 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
AP3D1-203ENST00000585652 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
AP3D1-203ENST00000585652 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
AP3D1-203ENST00000585652 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
AP3D1-203ENST00000585652 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
AP3D1-203ENST00000585652 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
AP3D1-203ENST00000585652 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
AP3D1-203ENST00000585652 NPM1P06748 294 aaKnown RBP eCLIP17.85■□□□□ 0.45
AP3D1-203ENST00000585652 ERCC6Q03468 1493 aa17.84■□□□□ 0.45
AP3D1-203ENST00000585652 RGL3Q3MIN7 710 aa17.83■□□□□ 0.45
AP3D1-203ENST00000585652 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
AP3D1-203ENST00000585652 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
AP3D1-203ENST00000585652 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
AP3D1-203ENST00000585652 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
AP3D1-203ENST00000585652 RAB3GAP2Q9H2M9 1393 aa17.77■□□□□ 0.44
AP3D1-203ENST00000585652 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.44
AP3D1-203ENST00000585652 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.43
AP3D1-203ENST00000585652 FOXD1Q16676 465 aa17.73■□□□□ 0.43
AP3D1-203ENST00000585652 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
AP3D1-203ENST00000585652 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
AP3D1-203ENST00000585652 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
AP3D1-203ENST00000585652 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
AP3D1-203ENST00000585652 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
AP3D1-203ENST00000585652 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
AP3D1-203ENST00000585652 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
AP3D1-203ENST00000585652 IGF1RP08069 1367 aa17.67■□□□□ 0.42
AP3D1-203ENST00000585652 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
AP3D1-203ENST00000585652 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
AP3D1-203ENST00000585652 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
AP3D1-203ENST00000585652 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
AP3D1-203ENST00000585652 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
AP3D1-203ENST00000585652 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
AP3D1-203ENST00000585652 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
AP3D1-203ENST00000585652 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
AP3D1-203ENST00000585652 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
AP3D1-203ENST00000585652 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
AP3D1-203ENST00000585652 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
AP3D1-203ENST00000585652 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
AP3D1-203ENST00000585652 SYNJ1O43426 1573 aa17.58■□□□□ 0.4
AP3D1-203ENST00000585652 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
AP3D1-203ENST00000585652 NEFMP07197 916 aa17.56■□□□□ 0.4
AP3D1-203ENST00000585652 MPHOSPH9Q99550 1183 aa17.56■□□□□ 0.4
AP3D1-203ENST00000585652 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
AP3D1-203ENST00000585652 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
AP3D1-203ENST00000585652 PKD2Q13563 968 aa17.55■□□□□ 0.4
AP3D1-203ENST00000585652 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
AP3D1-203ENST00000585652 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
AP3D1-203ENST00000585652 KIF21BO75037 1637 aa17.52■□□□□ 0.4
AP3D1-203ENST00000585652 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.4
AP3D1-203ENST00000585652 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
AP3D1-203ENST00000585652 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
AP3D1-203ENST00000585652 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
AP3D1-203ENST00000585652 CFTRP13569 1480 aa17.46■□□□□ 0.39
AP3D1-203ENST00000585652 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
AP3D1-203ENST00000585652 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.382e-9■■■■■ 59.6
AP3D1-203ENST00000585652 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
AP3D1-203ENST00000585652 NUP155O75694 1391 aa17.43■□□□□ 0.38
AP3D1-203ENST00000585652 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
AP3D1-203ENST00000585652 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
AP3D1-203ENST00000585652 CC2D1BQ5T0F9 858 aaKnown RBP17.42■□□□□ 0.38
AP3D1-203ENST00000585652 PHLDB1Q86UU1 1377 aa17.42■□□□□ 0.38
AP3D1-203ENST00000585652 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
AP3D1-203ENST00000585652 NESP48681 1621 aa17.41■□□□□ 0.38
AP3D1-203ENST00000585652 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
AP3D1-203ENST00000585652 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
AP3D1-203ENST00000585652 CUX1P39880 1505 aa17.36■□□□□ 0.37
AP3D1-203ENST00000585652 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.378e-7■■■■■ 28.2
AP3D1-203ENST00000585652 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
AP3D1-203ENST00000585652 ANP32EQ9BTT0 268 aa17.35■□□□□ 0.37
AP3D1-203ENST00000585652 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
AP3D1-203ENST00000585652 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
AP3D1-203ENST00000585652 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
AP3D1-203ENST00000585652 ZNF644Q9H582 1327 aaPredicted RBP17.33■□□□□ 0.37
AP3D1-203ENST00000585652 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.37
AP3D1-203ENST00000585652 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
AP3D1-203ENST00000585652 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
AP3D1-203ENST00000585652 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
AP3D1-203ENST00000585652 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
AP3D1-203ENST00000585652 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
AP3D1-203ENST00000585652 GGT6Q6P531 493 aa17.31■□□□□ 0.36
AP3D1-203ENST00000585652 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
AP3D1-203ENST00000585652 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
AP3D1-203ENST00000585652 TMF1P82094 1093 aa17.29■□□□□ 0.36
AP3D1-203ENST00000585652 FGD6Q6ZV73 1430 aa17.28■□□□□ 0.36
AP3D1-203ENST00000585652 NBR1Q14596 966 aa17.28■□□□□ 0.36
AP3D1-203ENST00000585652 HMGXB3Q12766 1538 aa17.27■□□□□ 0.35
AP3D1-203ENST00000585652 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
AP3D1-203ENST00000585652 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
AP3D1-203ENST00000585652 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
AP3D1-203ENST00000585652 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
AP3D1-203ENST00000585652 SAFB2Q14151 953 aaKnown RBP eCLIP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms